| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,118,506 | A→T | 7.8% | L75Q (CTA→CAA) | yceB ← | lipoprotein, DUF1439 family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,118,506 | 0 | A | T | 7.8% | 742.3 / 6.5 | 281 | L75Q (CTA→CAA) | yceB | lipoprotein, DUF1439 family |
| Reads supporting (aligned to +/- strand): ref base A (135/114); new base T (4/28); total (139/142) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.55e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 284 total aligned reads displayed.
GTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGATGGTG > CP009273/1118357‑1118655 | gTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAAcc > 2:850398/1‑150 (MQ=255) gTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAAcc < 2:4031732/150‑1 (MQ=255) gTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAAcc < 1:4891335/150‑1 (MQ=255) tCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCt < 2:4192428/150‑1 (MQ=255) tCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCt < 1:971631/150‑1 (MQ=255) tCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCt < 1:5067061/150‑1 (MQ=255) cATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTAt > 2:654051/1‑150 (MQ=255) tCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTc < 1:120807/150‑1 (MQ=255) tCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTc < 2:2519311/150‑1 (MQ=255) tCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTc < 1:3750017/150‑1 (MQ=255) tCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTc < 1:2681183/150‑1 (MQ=255) tCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCGTTCTGACTAACGAACAGGGAGGTCATGTCCAGATTGGGGTCTCCGGGTAGGGTAACCATAtta > 1:1000849/1‑149 (MQ=255) gACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCgg > 2:4792710/1‑150 (MQ=255) ccACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGct < 1:2972268/150‑1 (MQ=255) cACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTATGACTACCGAAAAGGGAGGTAATGTCCAGATTGGGGGCTCCCGTTATGGTAACCGTATTAGGcgc > 1:937138/1‑148 (MQ=255) cTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTAACGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGGTAGGGTAACCGTATTAGGcgcta > 2:1852917/1‑149 (MQ=255) ttCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTc < 1:2437460/150‑1 (MQ=255) tCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTcg < 2:1710870/150‑1 (MQ=255) cATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTcgcg > 2:3447781/1‑150 (MQ=255) ctctTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGGCTCCGGTTAGGGTAAACGTATTCGGCTCTTCGCGAcc > 1:3278355/1‑150 (MQ=255) ctctTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTATGACTACCGAACAGGGAGTTAATGTCCAGATTGGCGTCTCCGGGTATGGTAACCATATTCGGCTCTTAGCGAcc > 1:1062722/1‑150 (MQ=255) aGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACAACCGAACAGGGAGTTCAAGTCCAGATTTGCGTCTCCGGGTAGGGTAACCTTATTAGGCTCTTAGCGACCAATTTgg > 1:2192872/1‑150 (MQ=255) gAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCt < 2:4609629/150‑1 (MQ=255) aGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTTTCTTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTgg > 2:3504030/1‑150 (MQ=255) aGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTATGACAACCGAACAGGGAGTTCATGTCCAGATTTGCGTCTCCGGTTAGGGTAACCATATTAGGCTCTTAGCGACCAATTTTGCTgg > 1:567601/1‑150 (MQ=255) gATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGt < 2:3142055/150‑1 (MQ=255) gCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAgg > 2:3243457/1‑150 (MQ=255) cTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTg < 1:4620141/150‑1 (MQ=255) ttttCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTATGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTAGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTTTc > 2:3571562/1‑150 (MQ=255) tttCTTTATCAAACACGGGCAGTGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGGTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGtaa > 2:5234785/1‑148 (MQ=255) tttCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCa < 1:4625337/150‑1 (MQ=255) aTCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAat > 2:838102/1‑150 (MQ=255) aTCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAat < 2:4739516/150‑1 (MQ=255) aTCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGAATAACGAACAGGGAGTTCATGTACAGATTGGCGTCTCCGGTTAGGGTAACCATATTCGGCTCTTCGCGACCAATTTTGCGGGTCAGGTTTTTCAGAACAat > 1:748804/1‑150 (MQ=255) tCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAAATTTGCTGGTCAGGTTTGTCAGAACAata > 2:2105662/1‑150 (MQ=255) cAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAatat < 1:4779480/150‑1 (MQ=255) cAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAatat < 1:5224864/150‑1 (MQ=255) aaaCACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGCGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCGTATTCGGCTCTTCGCGACCAAATTGGCTGGGCAGGTTTGTCAGAACAATATg > 1:160247/1‑150 (MQ=255) aaaCACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATg < 2:1330833/150‑1 (MQ=255) aaaCACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATg < 1:2372503/150‑1 (MQ=255) aaaCACGGGCAGCGCTTTCAGCTTCAGTTACATGGACGCTTTAATACAACCCAACACGGATTTAATGTCCCGATTGGCGTCTCCGGGTAGGGTAACCAAATTCGGCACATCGCGAACCAATAGGCTGGTCACGTTTGTCACAACAAAATg > 1:3865350/1‑150 (MQ=255) cacGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTATGACTAACGAACAGGGAGTTCAATTACAGAATGGCGGCACCGGTTAGGGTAACCATATTAGGCTCTTAGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATAAGGGc > 1:867021/1‑150 (MQ=255) aGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTTACAACCGAACAGGGAGTTCAATTACACATTTGCGTCACCCGTTAGGGTAACCTTATTCGGCTAATAGCGACCAAATTTGCTGGTCAGGTTTGTCAGAACAAAATTGGCGTCAccc > 1:2890853/1‑150 (MQ=255) aGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGcc > 2:4445495/1‑150 (MQ=255) cgcTTTCAGCTTCAGTTTCATGGTCGCTTTATGACAACCGAACAGGGAGTTAATTTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTAGGCTCTTCGCGACCAAATTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCAc > 2:1908714/1‑150 (MQ=255) aGCTTCAGTTTCATGGTCGCTTTGTGACAACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTAGGCTCTTCGCGACCAAATTGGCTGGTCAGGTTTGTCAGAAAAATATGGGCGTCAGCCACGCCCGGt > 2:4910414/1‑150 (MQ=255) gCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTa > 2:2962112/1‑150 (MQ=255) cTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTaa < 2:3938999/150‑1 (MQ=255) cTTCAGTTTCATGGTCGCTTTCTGACTACCGAAAAGGGAGTTCATTTCCAGATTGGGGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTAAGGTTTGTGAGAACAATATGGGCGTCAGCCACGCCGGGTaa > 2:1990552/1‑150 (MQ=255) tttCATGGTCGCTTTCTGACTACCGAACTGGGAGTTCTTGTCCAGATTGGCGTCTCCGTTTTGGGTAACCTTATTCGGCTATTCGCGACCAATTTGGCTGGTCAGGTTTGTCTGAAAAATATGGGCGTCAGCCACGCCGGGTAAACCGat < 1:1770314/150‑1 (MQ=255) tttCATGGTCGCTTTCTGACTACCGAACCGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGat < 1:3068978/150‑1 (MQ=255) tttCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGat < 2:2871118/150‑1 (MQ=255) tttCAGGGTCGCTTTCTGACTACCTAACAGGGAGTTCATGACCAGATTGGCGTCTCCGGTTAGGTTAACCTTATTCGGCTCTTCGCGACCAATTGGGCTGTTCTGGTTTGTCAGAAAAATAGGGGCGTCAGCCACGCCGGGTAAACAGat < 2:2317533/150‑1 (MQ=255) tCATGGTCGCTTTCTGAGTACCGAACAGGGAGTTCATGTCCTGATTGGCGTCTCCGGTTAGGGTAACCTTAGTCGGCTCGTCGCGACCAATTTGGCGGGTCAGGTTTGTCTGAACAATAGGGGCGTCAGCCACGCCGGGTAAACCGatat < 2:3711955/150‑1 (MQ=255) cttGGTCGCTTTCTGACTACCGAACCGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTTGGGTAACCTTATTCGGCTCTTCGCGACCATTTGGGCTGGTCTGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATc < 1:4289793/148‑1 (MQ=255) aTGGTCGCTTTCTGACTACCGAACTGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTTGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCATAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCt < 1:3828918/150‑1 (MQ=255) tGGTCGCTTTCTGACTACCGAACTGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTATTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCtt < 2:1547636/150‑1 (MQ=255) tGGTCGCTTTCTGACTACCGAACAGGGAGTTCTTGTCCAGTTTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCTGTTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCtt < 2:2370491/150‑1 (MQ=255) tGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCtt < 2:1022451/150‑1 (MQ=255) cGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTga > 2:3752617/1‑150 (MQ=255) gCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTgag > 1:2571970/1‑150 (MQ=255) cTTTCTGACTACCGAACCGGGAGTTCATGTCCAGTTTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACAAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTgaga < 1:4802474/150‑1 (MQ=255) cTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTgaga < 2:567405/150‑1 (MQ=255) tttCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGaa < 2:2192872/150‑1 (MQ=255) tttCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGaa > 1:1893246/1‑150 (MQ=255) tCTGACTACCGAACAGGGTGTTCATGTCCTGATTGGCGTCGCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAat < 1:5239384/150‑1 (MQ=255) cTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAatt > 2:5033952/1‑150 (MQ=255) gACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAattat > 1:1989082/1‑150 (MQ=255) aCTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAattatt > 2:3267271/1‑150 (MQ=255) cTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTTGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCTGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAAttatta < 1:440473/150‑1 (MQ=255) cTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAAttatta < 2:2822490/150‑1 (MQ=255) tACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATtattat > 2:1171596/1‑150 (MQ=255) tACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATtattat > 1:4154051/1‑150 (MQ=255) tACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATtattat > 1:1491203/1‑150 (MQ=255) aCCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTACACAGATATCTTTTGAGAAATTATTATg > 2:4744311/1‑150 (MQ=255) aCCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATg < 2:3559272/150‑1 (MQ=255) ccGAACAGGGAGTTCATGTCCATATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACAAATTTGGCTGGTCAGTTTTGTAAGAACAATATGGGCTTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGt < 1:3547873/150‑1 (MQ=255) aaCAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTc > 2:5199283/1‑150 (MQ=255) aCAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCATTTTGGCTGGTCTGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCg < 1:3405033/150‑1 (MQ=255) ggtgTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTGGGCTGGTCAGGTTTGTCAGAACAATAGGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAg < 2:2398849/147‑1 (MQ=255) ggATTTCATGTCCAGATTGGCGTCTCCGGTTTGGGTAACCTTATTCGGCTCTTCGCGACAAATTTGGCTGGTCTGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAg < 1:4333913/150‑1 (MQ=255) ggAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCTGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAg < 1:1275739/150‑1 (MQ=255) gAGTTCATGTCCAGATTGGCGTCTCCGGTTTGGGTAACCTTATTCGGCTCTTCGCTACCAATTTGGCTGGTCTGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGc < 1:3965182/150‑1 (MQ=255) cATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTg < 1:362658/150‑1 (MQ=255) aTGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTgg < 2:2628604/150‑1 (MQ=255) tCCAGATGGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTa < 2:707821/150‑1 (MQ=255) cAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAAt > 2:3637377/1‑150 (MQ=255) tgATTGGCGTCTCCGGTTTGGGTAACCTTTTGCGGCTCTTCGCGACCATTTGGGCTGGTCTGGTTTGTCATAACAATTTGGGCGACAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAAtt < 1:1337610/149‑1 (MQ=255) aGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAAtt > 2:2746372/1‑150 (MQ=255) aTTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTc > 1:4493470/1‑150 (MQ=255) cGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGtt > 1:1692817/1‑150 (MQ=255) gTCTCCGTTTTGGGTACCCTTATTCGGCTCTCCGCCACCATTTGGGCTGGTCTGTTTTTTCAGAAAAATAGGGGCTTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTc < 1:270479/150‑1 (MQ=255) gTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTc > 1:4675182/1‑150 (MQ=255) gTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTGGGCTGGTCAGGTTTGTCAGAACAATAGGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTc < 2:726232/150‑1 (MQ=255) tctcCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCg > 2:3573918/1‑150 (MQ=255) tctcCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGACAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCg < 2:2706407/150‑1 (MQ=255) gTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGATg > 2:3617382/1‑150 (MQ=255) gTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGATg > 2:1145419/1‑150 (MQ=255) ttAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACAGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGATgg > 1:2267102/1‑150 (MQ=255) tAGGGTAACCTTATTCGGCTCGTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGATGgt < 2:3309972/150‑1 (MQ=255) | GTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGATGGTG > CP009273/1118357‑1118655 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |