| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,345,484 | A→C | 8.0% | intergenic (‑188/+180) | fabI ← / ← ycjD | enoyl‑[acyl‑carrier‑protein] reductase, NADH‑dependent/DUF559 family endonuclease‑related protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,345,484 | 0 | A | C | 8.0% | 526.6 / 4.8 | 213 | intergenic (‑188/+180) | fabI/ycjD | enoyl‑[acyl‑carrier‑protein] reductase, NADH‑dependent/DUF559 family endonuclease‑related protein |
| Reads supporting (aligned to +/- strand): ref base A (43/146); new base C (20/4); total (63/150) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.06e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 219 total aligned reads displayed.
AATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTCACCACAACAG > CP009273/1345335‑1345633 | aaTCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCa < 2:4466809/150‑1 (MQ=255) aGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAgg < 1:1036017/150‑1 (MQ=255) gATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCg < 1:5094695/150‑1 (MQ=255) gATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTACCCCCACCCAAAACCACACCCCCCAGGGGCg > 1:302638/1‑150 (MQ=255) ttCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑Ag < 2:5193637/150‑1 (MQ=255) ttCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑Ag < 1:1917753/150‑1 (MQ=255) tcgtcgTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑Ag < 2:585368/150‑1 (MQ=255) gtcgtTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑Agggg < 2:3479939/150‑1 (MQ=255) tcgtTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTGGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGa < 2:1498486/150‑1 (MQ=255) cgtTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTGTTCCCCACCCCCAAAACCCCGACCCCCACGGGCG‑Cgggggc > 2:3145582/1‑148 (MQ=255) cgtTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCGTTTGCCCCCCCCCCAAACCACGACCCACAGGGGGG‑Cgggggc > 1:3851576/1‑148 (MQ=255) gtTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTGCCCAGCCACCAAACCACGCCCCCGAGGGGCG‑GGGGGG‑cc > 2:2317386/1‑150 (MQ=255) gtTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTGCCCACACCCAAACCCACACCCCCCACGGGCG‑AGGGGA‑cc > 1:4366856/1‑150 (MQ=255) gtTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑cc < 1:4498057/150‑1 (MQ=255) gtTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCGCCCCCCAAACCCCTCCCCCGCGGGGCG‑GGGGGG‑cc > 2:4167899/1‑150 (MQ=255) gtTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTACCCGCACCCAAAACCACACCCCAGAGGGGCG‑AGGGGG‑cc > 1:327675/1‑150 (MQ=255) tAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTAt < 1:3483938/150‑1 (MQ=255) aGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCACACCCAAAACCACTCCCCCGAGGGGCG‑AGGGGA‑CCCTAtt > 2:2919930/1‑150 (MQ=255) gTAAACAGTACGAACAGATAAACGGTTATGATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATtg < 2:4034092/150‑1 (MQ=255) tAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATtgt < 1:812131/150‑1 (MQ=255) tAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATtgt < 1:5015668/150‑1 (MQ=255) aaaCAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATtgtg < 2:2989321/150‑1 (MQ=255) cAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCaa > 2:1285224/1‑150 (MQ=255) cAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCGCTCCCCCGCGGGGCG‑AGGGGA‑CCGTATTGTGCaa > 2:2842084/1‑150 (MQ=255) gTACGAACAGATAAACGGTTATTATACTCCACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAat < 2:2679389/150‑1 (MQ=255) gTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAat < 2:1209214/150‑1 (MQ=255) tACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAata < 1:4704420/150‑1 (MQ=255) tACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAata < 2:4015747/150‑1 (MQ=255) tACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTACCCGCACCCAAAACCACAACCCAGCGGGGCG‑CGGGGG‑CCGTATTTTGCCAata > 1:3929454/1‑150 (MQ=255) gAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCACACCCCAACCCGCTCCCCAGAGGGGCG‑AGGGGA‑CCGGATTGTGGCAATATTg > 2:4267938/1‑150 (MQ=39) aGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTAc < 1:1172507/150‑1 (MQ=255) aGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTAc < 1:2069115/150‑1 (MQ=255) aGATAAACGGTTATTATAATCAACCTGGCTGTGAGGAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTAc < 2:3906744/150‑1 (MQ=255) aTAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTGCCCACCCCCGAACCCTATCCCCAGCGGGGGG‑CGGGGA‑CCCTATAGTGGAAATATTGTTAccc > 2:1623501/1‑150 (MQ=255) aaaCGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCGCACCCCAACCCTAGCCCCCGAGGGGGG‑AGGGGA‑CCCGAATTTGCCCATATTTGTACCCCa > 1:1216418/1‑150 (MQ=255) aaaCGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCACACCCGAAACCACACCCCCCAGGGGCG‑AGGGGG‑CCGGATTGTGCCAATAATTTTAccccc > 1:4763402/1‑149 (MQ=255) aaCGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAg < 1:2244560/150‑1 (MQ=255) cGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGca < 2:4838029/150‑1 (MQ=255) tgTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTGCCCCCACCCCAACCCACACCCCCGCCGGGGG‑AGGGGG‑CCGGCATGGTCAACTAATGTTAACCCacccc > 1:5306557/2‑146 (MQ=255) attatAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCaacaaa < 2:357680/150‑1 (MQ=255) tataATCAACCTGGCTGTGAGTAGCTATAGGTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCaacaaaca < 1:2854327/150‑1 (MQ=255) aaTCAACCTGGCTGTGAGTCGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCAAACCCACTCCCCAGAGGGGCG‑CGGGGA‑CCGGATTGTGCAAATATTTTTACCCCCGCAACAAACAAGc > 2:646226/1‑150 (MQ=255) aTCAACCTGGCTGTGAGTAGCTATAGTAGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTGCCCACACCCCAACCCGACCACCACAGAGGCG‑TGGGGAGCCGAATT‑TGGAAAAAAAATTAAACCACCAACAAACAgaca > 1:2676676/1‑147 (MQ=255) cAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCa < 1:855420/150‑1 (MQ=255) cAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCa < 1:855500/150‑1 (MQ=255) cTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACa < 1:2399384/150‑1 (MQ=255) tGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCCCCCAAAACCACTCCCCCGAGGGGCG‑AGGGGC‑CCCGATTGTGCAAAAAATTTTACCCCCGCAAAAAAAAGGCGCAAACAg > 2:1703959/1‑150 (MQ=255) tgtgAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGcccc < 2:4960579/150‑1 (MQ=255) gTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTGCCCACCCCCCAACCCACACCCCCCAGGGGCG‑GGGGGG‑CCCGATTTTGGAAATATTTTTTACCCACCAACAAAAAAGCACAAAAAGCCCCCaaac > 1:420560/1‑148 (MQ=255) gTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTACCCACAACCGAACCCACAACCCAGACGGGCG‑AAGGGA‑CAGTATTGTGCCAATATTGTTAACCCCCCAACAAACATGCACATAAAGCCCCaaaaa > 2:2729670/1‑148 (MQ=255) tAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑‑GGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCt < 1:2169159/150‑1 (MQ=255) gCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTGCCCACACACCAACACAAAGCCCCCAGGGGGGCCGGGGA‑CCG‑ATTGGGGAAATATTGTTAACCCCGCCACAAACAGGCGGCGACAGCCCCCAAcccct > 2:1402606/1‑148 (MQ=255) gCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCtt < 2:4194748/150‑1 (MQ=255) gCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCtt < 1:3149203/150‑1 (MQ=255) cTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCGCTCCCCAGAGGGGCG‑CGGGGA‑CCGGAGTGTGCAAATATTGTTACCCCCGCAACAAACAGGCTCATACAGCCCCCAAcccagt > 2:2243980/1‑147 (MQ=38) tataGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTc < 2:1195470/150‑1 (MQ=255) ataGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCa < 2:2750557/150‑1 (MQ=255) ttGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGc < 2:3825006/150‑1 (MQ=255) tGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCg < 2:2361695/150‑1 (MQ=255) tCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCGTGTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTg < 2:1107086/150‑1 (MQ=255) ccGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTgg < 2:2689948/150‑1 (MQ=255) cGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTggg < 1:342084/150‑1 (MQ=255) gACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGa < 2:4650105/150‑1 (MQ=255) ggAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTACCCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGt < 2:2630415/150‑1 (MQ=255) cAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAg < 1:3242806/150‑1 (MQ=255) cAGGCTGCGGCA‑GGGGGGGCGCGTTTGCCCGCCCCCAAACCCCAACCCCCCGGGGGGG‑CGGGGG‑GCGGTGTGTGGAAAAATTGTTAACCCCCCAACAAACACGCGCCGAAAGCCCCCAACCCGTTGAAGGCGGTGGGGGGGGCgggtggg > 2:3243397/1‑145 (MQ=255) ggCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGAc < 2:4543062/150‑1 (MQ=255) cTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCATAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCt < 2:1010788/150‑1 (MQ=255) tGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCtt < 2:3988595/150‑1 (MQ=255) tGCGGCA‑GGGGGGGCGCTTGTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCtt < 2:3604905/150‑1 (MQ=255) gggggCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAatat < 1:4033282/150‑1 (MQ=255) gggggCGCTTGTCCCCTCACCCTAACCCTCTCCCCCGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAatat < 2:1223033/150‑1 (MQ=255) ggCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATtct < 1:2660927/150‑1 (MQ=255) cgcTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTcc < 1:540420/150‑1 (MQ=255) gcTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATTGAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCa < 2:4706658/150‑1 (MQ=255) cTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAg > 1:1713699/1‑150 (MQ=255) cTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGCTCAGACCTTGCCGAATATTCTCCAg < 2:164958/150‑1 (MQ=255) ttttCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGc < 1:3063286/150‑1 (MQ=255) cTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGtct < 2:4372212/150‑1 (MQ=255) cACCCTACCCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTcc < 2:1907220/150‑1 (MQ=255) cACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTcc < 1:768730/150‑1 (MQ=255) cACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTcc < 1:5274840/150‑1 (MQ=255) cccTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCAt < 1:1273438/150‑1 (MQ=255) cccTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCAt < 1:5296677/150‑1 (MQ=255) cTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGt > 2:85327/1‑150 (MQ=255) cTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGt < 1:5214002/150‑1 (MQ=255) aaCCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGttt > 1:1287759/1‑150 (MQ=255) aaCCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGttt > 1:2446013/1‑150 (MQ=255) aaCCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGttt > 2:4935972/1‑150 (MQ=255) aaCCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGttt > 2:570047/1‑150 (MQ=255) aCCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGtttt < 1:2919930/150‑1 (MQ=255) ccTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGttttaa > 1:1597835/1‑148 (MQ=255) ctctCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTcac < 1:4808031/150‑1 (MQ=255) ctctCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATGGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTGCAGACCTTGCCGACTATTCTCCAGCACCGTCTCCAGGGTTTctc > 2:4093978/1‑148 (MQ=255) cccAGAGGTGCG‑AGGGGA‑CCGTATTGTGCAAATATTGATACACCAGCAACAAACAGGCTCATACAGCCCCTAACCCTATCATGGCGATGGCTGGGACGGATCAGACCTTGCCGAATATTCTCCAGCACCGACTCCATGATTTCACCacaa > 2:2075894/1‑150 (MQ=255) ccAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTCACCacaac < 1:1559765/150‑1 (MQ=255) cAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTCACCacaaca > 1:186776/1‑150 (MQ=255) cAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTCACCacaaca < 2:715211/150‑1 (MQ=255) agagGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTCACCACAACAg > 1:1777359/1‑150 (MQ=255) agagGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTCACCACAACAg < 2:1840523/150‑1 (MQ=255) | AATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCA‑GGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCG‑AGGGGA‑CCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTCACCACAACAG > CP009273/1345335‑1345633 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |