| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,378,237 | G→T | 26.0% | intergenic (‑19/‑137) | ycjW ← / → ycjX | LacI family putative transcriptional repressor/DUF463 family protein, putative P‑loop NTPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,378,237 | 0 | G | T | 26.0% | 614.6 / 168.9 | 276 | intergenic (‑19/‑137) | ycjW/ycjX | LacI family putative transcriptional repressor/DUF463 family protein, putative P‑loop NTPase |
| Reads supporting (aligned to +/- strand): ref base G (102/102); new base T (41/31); total (143/133) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 286 total aligned reads displayed.
TTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTGGTCTTCAGAGCAGCACAGGACAGCAATGAAGCGACTT > CP009273/1378090‑1378385 | ttcttcAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGaa > 2:4221503/1‑150 (MQ=255) cttcAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCTAACg < 1:2796216/150‑1 (MQ=255) cttcAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACg > 1:4979331/1‑150 (MQ=255) cAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCTAACGTGa < 1:2712706/150‑1 (MQ=255) cAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGa > 1:3538832/1‑150 (MQ=255) aTGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAAt > 2:220972/1‑150 (MQ=255) gCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCTATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAAtgct < 2:312875/150‑1 (MQ=255) cccGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAAtgctg > 2:428514/1‑150 (MQ=255) gTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCTAACGTGAATGCTGcac < 1:64853/150‑1 (MQ=255) aaCACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCTAACGTGAATGCTGCACAt < 2:475351/150‑1 (MQ=255) aaCACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGATTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCTAACGTGAATGCTGCACAt > 2:3781787/1‑150 (MQ=255) cacTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCTAACGTGAATGCTGCACATCt > 2:3917691/1‑150 (MQ=255) cacTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCt < 2:1106932/150‑1 (MQ=255) acttttttCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCt < 1:5215291/147‑1 (MQ=255) acTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCtt < 2:5133931/150‑1 (MQ=255) tttCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATgg < 2:1813144/150‑1 (MQ=255) cgcgcgCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGt > 2:5015775/1‑150 (MQ=255) gcTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGcc > 2:5168190/1‑150 (MQ=255) ggggAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGa > 1:4153276/1‑150 (MQ=255) ggggAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGa > 2:1950785/1‑150 (MQ=255) agaTATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCTAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGac < 2:587374/150‑1 (MQ=255) atatTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGacaa > 1:3007838/1‑150 (MQ=255) ttGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCa > 2:4648631/1‑150 (MQ=255) tGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAg > 2:1236785/1‑150 (MQ=255) cTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGtt > 2:4480676/1‑150 (MQ=255) cTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGtt > 1:4733534/1‑150 (MQ=255) cTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGtt > 1:2080481/1‑150 (MQ=255) ttATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTg < 2:2348824/150‑1 (MQ=255) ttCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATa < 2:2019601/150‑1 (MQ=255) ttCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATa < 2:2806788/150‑1 (MQ=255) tCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCTAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATaa > 1:3955448/1‑150 (MQ=255) tCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCCTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATaa < 2:4129763/150‑1 (MQ=255) cACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCaa < 1:4707258/150‑1 (MQ=255) aCGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAAt < 1:389555/150‑1 (MQ=255) cgcgTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAAtg < 1:1570308/150‑1 (MQ=255) gcgTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCTAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAAtgg < 2:1412278/150‑1 (MQ=255) gATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCTAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAAtggcctg > 1:1438933/1‑150 (MQ=255) aCGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAAtggcctggcc < 1:2988799/150‑1 (MQ=255) gTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGccccc < 2:4354066/150‑1 (MQ=255) aTTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACAt < 2:1881932/150‑1 (MQ=255) ttttGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCTAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACAtt < 2:3267143/150‑1 (MQ=255) ttttGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGTCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACAtt < 2:5264973/150‑1 (MQ=255) ttttGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACAtt < 2:1627326/150‑1 (MQ=255) ttGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCa > 2:4568147/1‑150 (MQ=255) ttGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCa > 1:3181482/1‑150 (MQ=255) tGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCat > 1:3320447/1‑150 (MQ=255) tGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCat > 2:4905200/1‑150 (MQ=255) tGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCat < 1:2262933/150‑1 (MQ=255) aTACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCatat > 1:1059036/1‑150 (MQ=255) tACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCTAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATc < 2:3916461/150‑1 (MQ=255) tACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCTAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATc > 2:2269072/1‑150 (MQ=255) cGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCt < 1:1813991/150‑1 (MQ=255) gCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCtt < 1:428514/150‑1 (MQ=255) ccTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTa > 2:4674301/1‑150 (MQ=255) cTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTAc > 2:5321582/1‑150 (MQ=255) cTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTAc > 2:1447036/1‑150 (MQ=255) cTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTAc > 1:2979947/1‑150 (MQ=255) cTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTAc < 1:5082221/150‑1 (MQ=255) cTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTAc < 1:4087984/150‑1 (MQ=255) tGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACg < 1:83967/150‑1 (MQ=255) aaCCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAAt < 2:88705/150‑1 (MQ=255) aCCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCTAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATg < 2:118461/150‑1 (MQ=255) cTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCTAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGAtt < 2:5216695/150‑1 (MQ=255) cTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCTAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGAtt > 1:4139334/1‑150 (MQ=255) gtcAATATCATAAATAGTAGGGGACATAGTTCAGGAACTACGTCATAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGACCCCACATTCATATCCTTACGAATGAtttt < 2:625632/148‑1 (MQ=255) gCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGAttttt > 1:4383025/1‑150 (MQ=255) cAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGAtttttt < 1:751762/150‑1 (MQ=255) aaTATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGAttttttt < 2:74994/150‑1 (MQ=255) aaTATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGAttttttt < 2:3554510/150‑1 (MQ=255) aaTATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGAttttttt > 1:3787427/1‑150 (MQ=255) atatCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGAtttttttt > 2:1535078/1‑150 (MQ=255) atCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCTAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCt > 1:4560081/1‑150 (MQ=255) tCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTg < 2:3068543/150‑1 (MQ=255) cATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTgg > 2:4040385/1‑150 (MQ=255) cATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTgg < 1:5311056/150‑1 (MQ=255) aTAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTGGt > 2:3934288/1‑150 (MQ=255) aaaTAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTGGTCt > 2:1093323/1‑150 (MQ=255) aaTAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTGGTCtt > 2:260800/1‑150 (MQ=255) aTAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTGGTCTTc < 2:5248564/150‑1 (MQ=255) aTAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTGGTCTTc < 2:4328606/150‑1 (MQ=255) tagtagGGGACATAGGTCAGGAACTCCGTCCTAACGAGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTGGTCTTCa > 2:82020/1‑150 (MQ=255) tagtagGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCAAATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTGGTCTTCa > 2:3689863/1‑150 (MQ=255) tagGGGTCATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTGGTCTTCagag < 1:4131949/150‑1 (MQ=255) ggggACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTGGTCTTCAGagca < 2:2554244/150‑1 (MQ=255) ggACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTGGTCTTCAGagcagc > 2:477471/1‑150 (MQ=255) gACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTGGTCTTCAGAgcagca > 1:1718491/1‑150 (MQ=255) cATAGGTCAGGAACTCCGTCCTAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTGGTCTTCAGAGCAGcaca < 1:2337780/150‑1 (MQ=255) cATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCCGTTGATAATCAATGGCCTGGCCCCCACATTCATCACCTTACGAATGATTTTGTTACTGGTCTTCAGAGCAGcacc > 1:339826/1‑149 (MQ=255) cATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTGGTCTTCAGAGCAGcaca > 1:2543349/1‑150 (MQ=255) tAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTGGTCTTCAGAGCAGCACAgg > 2:4939474/1‑150 (MQ=255) aGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTGGTCTTCAGAGCAGCACAGGa < 1:3647908/150‑1 (MQ=255) gTCAGGAACTCCGTCCTAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTGGTCTTCAGAGCAGCACAGGACa > 2:2455153/1‑150 (MQ=255) aGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTGGTCTTCAGAGCAGCACTGGACAGCa > 2:2980166/1‑150 (MQ=255) aGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTGGTCTTCAGAGCAGCACAGGACAGCa > 1:1127867/1‑150 (MQ=255) gAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTGGTCTTCAGAGCAGCACAGGACAGCAAt < 1:2926946/150‑1 (MQ=255) aCTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTGGTCTTCAGAGCAGCACAGGACAGCAATGa < 1:2223821/150‑1 (MQ=255) cgtccgAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGACCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTGGTCTTCAGAGCAGCACAGGACAGCAATGAAGCg < 1:4612271/150‑1 (MQ=255) gtccgAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTGGTCTTCAGAGCAGCACAGGACAGCAATGAAGCGa > 1:3822572/1‑150 (MQ=255) tccgAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACACCACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTGTCTGGTCTTCAGAGCAGCACAGGACAGCCATGAAGCGAc > 2:134794/1‑150 (MQ=255) ccgAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTGGTCTTCAGAGCAGCACAGGACAGCAATGAAGCGACt < 1:3689672/150‑1 (MQ=255) | TTCTTCAATGGCCCGTAACACTTTTTCGCGCGCTTCCGGGGAGATATTAGTTTGCTTATTCAGCACGCGTGATACGGTGGATTTTGATACGCCTGCAACCCTGGCAATATCATAAATAGTAGGGGACATAGGTCAGGAACTCCGTCCGAACGTGAATGCTGCACATCTTATGGAGTTCGCCGGTCGATGACAACACGGGCAGTTGATAATCAATGGCCTGGCCCCCACATTCATATCCTTACGAATGATTTTTTTTCTGGTCTTCAGAGCAGCACAGGACAGCAATGAAGCGACTT > CP009273/1378090‑1378385 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |