| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,401,341 | C→A | 7.1% | D238Y (GAT→TAT) | ydaM ← | diguanylate cyclase, csgD regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,401,341 | 0 | C | A | 7.1% | 932.5 / 6.7 | 311 | D238Y (GAT→TAT) | ydaM | diguanylate cyclase, csgD regulator |
| Reads supporting (aligned to +/- strand): ref base C (113/159); new base A (37/2); total (150/161) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.42e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 312 total aligned reads displayed.
AAGCTGTAATCCTGAGCGATGGCGAGATGCTGCATTTGGCCTGGTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGTTTATGACCACCGGGTAAATGCGAGATTTCATGCATGATAG > CP009273/1401193‑1401490 | aaGCTGTAATCCTGAGCGATGGCGAGATGCTGCATTTGGCCTGGTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCa < 1:4599128/150‑1 (MQ=255) cTGTAATCCTGAGCGATGGCGAGATGCTGCATTTGGCCTGGTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGc > 2:1367653/1‑150 (MQ=255) tGTAATCCTGAGCGATGGCGAGATGCTGCATTTGGCCTGGTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGca > 2:5278334/1‑150 (MQ=255) tAATCCTGAGCGATGGCGAGATGCTGCATTTGGCCTGGTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGcaca < 2:1455137/150‑1 (MQ=255) aaTCCTGAGCGATGGCGAGATGCTGCATTTGGCCTGGTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTTCTCAGTAATATCATGCACaa > 1:933883/1‑150 (MQ=255) tGAGCGATGGCGAGATGCTGCATTTGGCCTGGTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACAt < 1:2004132/150‑1 (MQ=255) gAGCGATGGCGAGATGCTGCATTTGGCCTGGTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATa < 2:288868/150‑1 (MQ=255) aGCGATGGCGAGATGCTGCATTTGGCCTGGTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAAAACATaa > 2:2246411/1‑150 (MQ=255) gCGATGGCGAGATGCTGCATTTGGCCTGGTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAAc < 1:1477848/150‑1 (MQ=255) gATGGCGAGATGCTGCATTTGGCCTGGTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACAt < 2:545628/150‑1 (MQ=255) aTGGCGAGATGCTGCATTTGGCCTGGTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATg < 2:2102543/150‑1 (MQ=255) aTGGCGAGATGCTGCATTTGGCCTGGTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTGTTTGCTCAGTAATATCATGCACAATACATAACATg > 1:2184170/1‑150 (MQ=255) aTGGCGAGATGCTGCATTTGGCCTGGTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTGTTTGCGCAGTAATATAATGCACAATACATAACAtt > 1:1696231/1‑149 (MQ=255) ggCGAGATGCTGCATTTGGCCTGGTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAg < 2:1216412/150‑1 (MQ=255) ggCGAGATGCTGCATTTGGCCTGGTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAAAAACATGCACAAAACATaaaaagat > 1:3765201/1‑144 (MQ=255) ggCGAGATGCTGAATTTTGACTGGTTCCGTAATGTTATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATTCACAATACATAACATGAg < 1:4257894/150‑1 (MQ=255) gagaTGCTGCATTTGGCCTGGTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCtt < 2:160705/150‑1 (MQ=255) gagaTGCTGCATTTGGCCTGGTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCtt < 2:1003074/150‑1 (MQ=255) gaTGCTGCATTTGGCCTGGTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATTCACAATACATAACATGAGCTTGt > 1:1189349/1‑150 (MQ=255) gaTGCTGCATTTGGCCTGGTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGt > 2:3341374/1‑150 (MQ=255) tgctgcATTTGGCCTGGTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCg < 2:1075989/150‑1 (MQ=255) cATTTGGCCTGGTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATa > 1:3058851/1‑150 (MQ=255) tttGGCCTGGTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATaaa < 1:410772/150‑1 (MQ=255) ttGGCCTGGTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACAAAACATGAGCTTGTCGCCATAAAt > 1:3399015/1‑150 (MQ=255) ttGGCCTGGTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTGTTTGCTCAGTAATATCATGCACCATACATAACATGTGCTTGTCGCCATAAAt > 1:2542995/1‑150 (MQ=255) ggCCTGGTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTGTTTGCTCAGTAATATCATGCACAATACATAACAAGAGCTTGTCGCCATAAAttt > 1:334102/1‑150 (MQ=255) cTGGTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCaa > 2:156352/1‑150 (MQ=255) ggTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATc > 2:4716219/1‑150 (MQ=255) tCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTGTTTTGTGAGTGATATAAAACACAAAACAAAACCAGAGCTGGTCGCCCAAAAATTAAAtatgg > 1:2267267/1‑146 (MQ=255) cGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTcc < 2:3501116/150‑1 (MQ=255) gTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCg < 2:3394972/150‑1 (MQ=255) gtgATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATa < 2:4586736/150‑1 (MQ=255) tgATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATTCACAATACATAACATGAGCTTGTCGCCATAAAATTCAATCGGTCCGGCATAg > 1:2674901/1‑150 (MQ=255) gATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTTGTCAGTAAAATCAATCACAAAAAAAAAAAAGAGCTTGTCGCCCAAAAATTAAAACGGGCCGGccaagg > 1:4962214/1‑145 (MQ=255) gATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTTCTCAGTAATATAATTCACAATACATAAAATGAGCTTGTCGCCAAAAATTTCAATCGGTCCGGCATAgg > 1:2068354/1‑150 (MQ=255) tAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTc > 2:2790190/1‑150 (MQ=255) aaaaCTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCt < 1:5324913/150‑1 (MQ=255) aaaCTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTg < 1:2610555/150‑1 (MQ=255) caCTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGc < 2:835278/149‑1 (MQ=255) cTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATAATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGcac < 2:5087061/150‑1 (MQ=255) gTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACAt < 2:4501763/150‑1 (MQ=255) gCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTGTTTGGTCAGTAATATAATGCACAATAAATAACAAGAGCTTGTAGCCAAAAATTTAAATAGGTCCGGCATAGGGCTGCACAAGAc > 1:3635711/1‑150 (MQ=255) aGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATTCACAATACAAAACAAGAGCTTGTCGCCCAAAATTTCAATCGGTCCGGCCTATGTCTGCCCAAGACGAGTCGaa > 1:1127286/1‑150 (MQ=255) gTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAAc < 1:1420527/150‑1 (MQ=255) gTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCACTAATATAAATCACAATACAAAACAAGAGCGTGTCGCCCAAAATTTAAAACGGTCCGGCATAGGTCTGCACAAGACGAGTAGAAc > 1:2720109/1‑150 (MQ=255) tAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAAcc < 1:4510996/150‑1 (MQ=255) aTCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCAt < 1:5154339/150‑1 (MQ=255) aTCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTGTTTGGTGAGGAATATAAAGCACAAAACAAAACAAGAGCTTGTCGCCCAAAATTTCAAAAGGTGCGGCCGAGGTCTGCACAAGACGAGTCGAACCaa > 1:1365164/1‑149 (MQ=255) ccGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATcc < 1:692054/150‑1 (MQ=255) ccGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATcc < 2:316822/150‑1 (MQ=255) ccGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCGTGTAGCCATAAATTTAAATCGGTCCGGCCAAGGGCTGCACATGTCGAGTCGaaccaacc > 1:4401932/1‑150 (MQ=255) ccGGTCATCGCGTAATGGTGTGAAGCATGTTCCAGCTTCTCCTACAGCCTTTTTTGCTCAGTAATATAATGAACAATACATAACCTGAGCTTGTCGCCATTAATTTCAATCGGTCCGGCATAGGTCTGCACATGAAGAGTCGAACCATcc < 2:3990870/150‑1 (MQ=255) ggTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTTCTCAGTAATATCATTCACAATACATAACATGAGCTTTTCGCCATAAATTTAAAACGGTCCGGCAAAGGTCTGCACAAGACGAGTCGAACCATCCGc > 1:3377568/1‑150 (MQ=255) gTCATCGCGTCATGGTGAGCAGCTTGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGcc < 2:1768946/150‑1 (MQ=255) gTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTGTTTGGTGAGTAATATAATGCACAATACATAACAAGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATTTCGTGTCGGACCATCCGcc > 1:52554/1‑150 (MQ=255) gTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTGTTTGCGCAGTAAAATAAAGCACAAAAAAAAACAAGAGCTTGTAGCCAAAAAATTCAAACGGGACGGCATAGGTGTGCACATGACGAGTCGAACCaaacccc > 2:1812803/1‑144 (MQ=255) aTCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGt < 2:776569/150‑1 (MQ=255) aTCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGt < 2:4343973/150‑1 (MQ=255) tCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGtt < 1:919229/150‑1 (MQ=255) tCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGtt > 2:2999733/1‑150 (MQ=255) cgcgTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGttt > 2:91818/1‑150 (MQ=255) cgcgTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCAGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGttt < 1:3908386/150‑1 (MQ=255) cgTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTAt < 2:4287777/150‑1 (MQ=255) gTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTGTTTGGTCAGTAATATAATGCACAAAACAAAACATGAGCTTGTCGCCAGAAATTTAAATCGGTCCGGCCTAGGTCTGCACAAGTCGCGTCGAACCATCCGCCAGGTTATg > 1:4666769/1‑150 (MQ=255) cATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGGTAAGTAAAATAAATCACAATACATAAAATGAGCGTTTCGCCAGAAATTTCAATCGGTCCGGCAAAGGTCTGCACAAGAAGAGTCGAACCATACGCCAGTTTATGaa > 1:5189727/1‑150 (MQ=255) aTGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAAc < 2:401997/150‑1 (MQ=255) aTGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTGTTTGGTCAGTAATATAATTCACAAAAAATAAAAAGAGCTTGTGGCCAAAAAATTAAATAGGTCCGGCAGAGGTCTGCACATGACGAGTCGAACCAACCGCCAGTTTATTAAc > 1:2421594/1‑150 (MQ=255) ggTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACaa < 2:4044596/150‑1 (MQ=255) gTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACaaa < 1:3005625/150‑1 (MQ=255) agcagcATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAAtt < 2:3284882/150‑1 (MQ=255) agcaTGTTCCAGCTGCTCCTCCAGCCGTTTTTTCTCAGTAATATCATGCACAAAACATAACATGAGCTTGTCGCCAAAAAATTAAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCaa > 1:2627871/1‑150 (MQ=255) agcaTGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATAGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCaa > 2:4738027/1‑150 (MQ=255) aTGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAgg < 1:1880593/150‑1 (MQ=255) aTGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAgg < 2:3885134/150‑1 (MQ=255) aTGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATAATGCACAAAACATAACAAGAGCTTGTCGCCAAAAATTTAAATCGGTCCGGCATAGGTCTGCACAAGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAgg > 1:2108781/1‑150 (MQ=255) tGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCCTAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCCGTTTATGAACAAAATTCAAAGGt > 2:200114/1‑150 (MQ=255) ttCCAGCTGCTCCTCCAGCCGTTTTTTCTCAGTAAAATAAATCACAATACATAAAAAGAGCATGTGGCCATAAATTTAAAAAGGTCCGGCAAATGTCTGCACATGACGAGTAGAAACATACGCCAGTTTATGAAAAAAATTAAAAAGttt > 1:48628/1‑150 (MQ=255) ttCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGGAATATCATGCACAATACATAACATTAGCTTGTAGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGATTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGgtt > 2:4128496/1‑150 (MQ=255) ccAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGTTTAt < 2:3058851/150‑1 (MQ=255) ccAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGTTTAt < 1:420244/150‑1 (MQ=255) gctgctCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGTTTATGac < 1:4446685/150‑1 (MQ=255) tgctCCTCCAGCCGTTTTTGCTCAGTAAAATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTAAAAGGTTTATGacca > 2:2423112/1‑150 (MQ=255) ccAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGTTTATGACCACCGGGTa < 2:5118694/150‑1 (MQ=255) cAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGTTTATGACCACCGGGTaa < 2:1151098/150‑1 (MQ=255) cAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGTTTATGACCACCGGGTaa < 1:4754676/150‑1 (MQ=255) cAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGTTTATGACCACCGGGTaa < 1:5087199/150‑1 (MQ=255) cAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGTTTATGACCACCGGGTaa < 1:2045606/150‑1 (MQ=255) gCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGTTTATGACCACCGGGTAAAt < 2:3765201/150‑1 (MQ=255) cGTTTTTGCTCATTAATAACATTCAAAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGAAGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAATGGTTTATGACCACCGGGTAAATGc < 1:1615700/150‑1 (MQ=255) aGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGTTTATGACCACCGGGTAAATGCGAGATTTcatg < 1:5286923/150‑1 (MQ=255) gTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGTTTATGACCACCGGGTAAATGCGAGATTTcatgc > 1:1224479/1‑150 (MQ=255) aaTATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGTTTATGACCACCGGGTAAATGCGAGATTTcatgcat < 1:3120344/150‑1 (MQ=255) aaTATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATACGCCAGTTTATGAACAAAATTCAAAGGTTTATGACCACCGGGTAAATGCGAGATTTcatgcat < 1:1040019/150‑1 (MQ=255) atatCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGTTTATGACCACCGGGTAAATGCGAGATTTcatgcatg < 1:3223578/150‑1 (MQ=255) atatCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGTTTATGACCACCGGGTAAATGCGAGATTTcatgcatg < 1:1837608/150‑1 (MQ=255) tatCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGTTTATGACCACCGGGTAAATGCGAGATTTCATGCATGa > 1:2931781/1‑150 (MQ=255) atCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGTTTATGACCACCGGGTAAATGCGAGATTTCATGCATGAt < 2:3635711/150‑1 (MQ=255) atCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGTTTATGACCACCGGGTAAATGCGAGATTTCATGCATGAt > 2:2552154/1‑150 (MQ=255) atCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGTTTATGACCACCGGGTAAATGCGAGATTTCATGCATGAt > 1:4806520/1‑150 (MQ=255) tCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGTTTATGACCACCGGGTAAATGCGAGAGTTCATGCATGATa < 2:748143/150‑1 (MQ=255) | AAGCTGTAATCCTGAGCGATGGCGAGATGCTGCATTTGGCCTGGTTCCGTAATGTGATAAAACTGTCGCCGATTCAGTAATCCGGTCATCGCGTCATGGTGAGCAGCATGTTCCAGCTGCTCCTCCAGCCGTTTTTGCTCAGTAATATCATGCACAATACATAACATGAGCTTGTCGCCATAAATTTCAATCGGTCCGGCATAGGTCTGCACATGACGAGTCGAACCATCCGCCAGTTTATGAACAAAATTCAAAGGTTTATGACCACCGGGTAAATGCGAGATTTCATGCATGATAG > CP009273/1401193‑1401490 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |