Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 1,508,681 C→A 100% F198L (TTC→TTA)  ydcU → putative spermidine/putrescine transporter subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092731,508,6810CA100.0% 921.1 / NA 280F198L (TTC→TTA) ydcUputative spermidine/putrescine transporter subunit
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (148/132);  total (148/132)
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

Only 100 of 280 total aligned reads displayed.

AGATGGCGTGGCTCAGTGGTTTTTACAACATCTTGGGCTGGAACCACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTCATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTT  >  CP009273/1508534‑1508827
                                                                                                                                                   |                                                                                                                                                  
aGATGGCGTGGCTCAGTGGTTTTTACAACATCTTGGGCTGGAACCACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAAt                                                                                                                                                  >  1:5024491/1‑150 (MQ=255)
aGATGGCGTGGCTCAGTGGTTTTTACAACATCTTGGGCTGGAACCACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAAt                                                                                                                                                  <  1:3654153/150‑1 (MQ=255)
 gATGGCGTGGCTCAGTGGTTTTTACAACATCTTGGGCTGGAACCACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATg                                                                                                                                                 >  1:3291733/1‑150 (MQ=255)
 gATGGCGTGGCTCAGTGGTTTTTACAACATCTTGGGCTGGAACCACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATg                                                                                                                                                 <  2:4243163/150‑1 (MQ=255)
  aTGGCGTGGCTCAGTGGTTTTTACAACATCTTGGGCTGGAACCACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGa                                                                                                                                                <  1:4192208/150‑1 (MQ=255)
      cGTGGCTCAGTGGTTTTTACAACATCTTGGGCTGGAACCACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCt                                                                                                                                            <  1:2822315/150‑1 (MQ=255)
         ggCTCAGTGGTTTTTACAACATCTTGGGCTGGAACCACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGcc                                                                                                                                         >  1:1211085/1‑150 (MQ=255)
           cTCAGTGGTTTTTACAACATCTTGGGCTGGAACCACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCg                                                                                                                                       >  2:1784024/1‑150 (MQ=255)
            tCAGTGGTTTTTACAACATCTTGGGCTGGAACCACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGt                                                                                                                                      <  1:2793470/150‑1 (MQ=255)
             cAGTGGTTTTTACAACATCTTGGGCTGGAACCACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGtt                                                                                                                                     <  1:81150/150‑1 (MQ=255)
              aGTGGTTTTTACAACATCTTGGGCTGGAACCACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTGTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTc                                                                                                                                    >  2:5016552/1‑150 (MQ=255)
                tGGTTTTTACAACATCTTGGGCTGGAACCACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAg                                                                                                                                  >  2:207941/1‑150 (MQ=255)
                       tACAACATCTTGGGCTGGAACCACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGgcgc                                                                                                                           <  2:5280507/150‑1 (MQ=255)
                          aacaTCTTGGGCTGGAACCACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTg                                                                                                                        >  1:2331241/1‑150 (MQ=255)
                            caTCTTGGGCTGGAACCACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAg                                                                                                                      >  1:3213478/1‑150 (MQ=255)
                            caTCTTGGGCTGGAACCACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCGTGCTGGTGTGTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCGTGAg                                                                                                                      >  2:5193850/1‑150 (MQ=255)
                             aTCTTGGGCTGGAACCACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGc                                                                                                                     <  1:221500/150‑1 (MQ=255)
                             aTCTTGGGCTGGAACCACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGc                                                                                                                     >  2:2917902/1‑150 (MQ=255)
                                 tGGGCTGGAACCACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGttt                                                                                                                 >  1:2477065/1‑150 (MQ=255)
                                 tGGGCTGGAACCACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGttt                                                                                                                 <  2:187071/150‑1 (MQ=255)
                                 tGGGCTGGAACCACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGttt                                                                                                                 >  1:4046577/1‑150 (MQ=255)
                                      tGGAACCACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTgccgc                                                                                                            >  2:2441985/1‑150 (MQ=255)
                                         aaCCACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGt                                                                                                         >  1:1264132/1‑150 (MQ=255)
                                          aCCACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGGTCAGGCGGCGCTTGAGCGTTTGCCGCCGTc                                                                                                        >  2:4091777/1‑150 (MQ=255)
                                           ccACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCa                                                                                                       <  1:3825659/150‑1 (MQ=255)
                                           ccACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCa                                                                                                       >  2:5153040/1‑150 (MQ=255)
                                             aCTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCAtt                                                                                                     <  1:4740370/150‑1 (MQ=255)
                                               tgctgACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCAttgt                                                                                                   >  1:759567/1‑150 (MQ=255)
                                                  tgAATGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGc                                                                                                >  1:3976999/1‑150 (MQ=255)
                                                    aCTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAg                                                                                              <  2:2629270/150‑1 (MQ=255)
                                                     cTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAgg                                                                                             >  1:1992667/1‑150 (MQ=255)
                                                     cTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAgg                                                                                             <  1:4306792/150‑1 (MQ=255)
                                                      tGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGc                                                                                            >  1:5222675/1‑150 (MQ=255)
                                                      tGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGc                                                                                            >  1:4382080/1‑150 (MQ=255)
                                                                      ccTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCAGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGgc                                                                            <  2:2680584/150‑1 (MQ=255)
                                                                          cGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCAc                                                                        >  2:1343456/1‑150 (MQ=255)
                                                                          cGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCAc                                                                        <  1:2084465/150‑1 (MQ=255)
                                                                          cGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGGTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCAc                                                                        <  2:468297/150‑1 (MQ=255)
                                                                           ggTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACg                                                                       >  1:5276953/1‑150 (MQ=255)
                                                                           ggTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACg                                                                       <  1:94185/150‑1 (MQ=255)
                                                                               ggCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCa                                                                   >  2:4768618/1‑150 (MQ=255)
                                                                                gCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCAc                                                                  >  2:3632818/1‑150 (MQ=255)
                                                                                  ggAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGa                                                                >  2:1614066/1‑150 (MQ=255)
                                                                                  ggAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCGGATCTCGGCGCACGTCCACGa                                                                >  1:1620091/1‑150 (MQ=255)
                                                                                   gAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGAc                                                               >  1:5007019/1‑150 (MQ=255)
                                                                                   gAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGAc                                                               <  1:1351510/150‑1 (MQ=255)
                                                                                    aaaTACGCTGTCAACTTCCGGGCTGGGGCGCTTTCGGGTGTGTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGGCAGTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACa                                                              >  2:2584000/1‑150 (MQ=255)
                                                                                        aCGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAAcc                                                          <  1:1877598/150‑1 (MQ=255)
                                                                                         cGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCt                                                         >  1:2493823/1‑150 (MQ=255)
                                                                                           cTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTTCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCttt                                                       >  1:3539767/1‑150 (MQ=255)
                                                                                           cTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCttt                                                       <  1:4773526/150‑1 (MQ=255)
                                                                                            tGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTc                                                      >  1:2163795/1‑150 (MQ=255)
                                                                                               cAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCt                                                   <  2:4478773/150‑1 (MQ=255)
                                                                                               cAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCt                                                   >  2:947132/1‑150 (MQ=255)
                                                                                                aaCTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTa                                                  >  2:3493781/1‑150 (MQ=255)
                                                                                                 aCTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTAt                                                 >  2:3058251/1‑150 (MQ=255)
                                                                                                 aCTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACCTCCACGACAAACCATTCGCTAt                                                 >  1:1208191/1‑150 (MQ=255)
                                                                                                  cTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTAtg                                                <  1:1407363/150‑1 (MQ=255)
                                                                                                  cTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATACTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTAtg                                                >  2:3185212/1‑150 (MQ=255)
                                                                                                   ttCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTAtgt                                               <  1:1782369/150‑1 (MQ=255)
                                                                                                     ccGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATgtgg                                             <  2:3796292/150‑1 (MQ=255)
                                                                                                     ccGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATgtgg                                             >  2:1491887/1‑150 (MQ=255)
                                                                                                         gCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGtgct                                         <  2:365778/150‑1 (MQ=255)
                                                                                                          cTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGtgctg                                        <  2:5324909/150‑1 (MQ=255)
                                                                                                          cTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGtgctg                                        >  1:302103/1‑150 (MQ=255)
                                                                                                            ggggCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGcc                                      <  2:3960827/150‑1 (MQ=255)
                                                                                                            ggggCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGcc                                      <  2:4951178/150‑1 (MQ=255)
                                                                                                            ggggCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGcc                                      <  2:3531458/150‑1 (MQ=255)
                                                                                                             gggCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCg                                     <  1:3312117/150‑1 (MQ=255)
                                                                                                             gggCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCg                                     <  1:2925320/150‑1 (MQ=255)
                                                                                                                cgcTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTg                                  <  1:5233653/150‑1 (MQ=255)
                                                                                                                cgcTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTg                                  <  2:1504820/150‑1 (MQ=255)
                                                                                                                 gcTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTgg                                 >  2:63729/1‑150 (MQ=255)
                                                                                                                  cTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGc                                >  1:491954/1‑150 (MQ=255)
                                                                                                                   tttCTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCa                               >  2:4915629/1‑150 (MQ=255)
                                                                                                                      cTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATc                            >  2:2032513/1‑150 (MQ=255)
                                                                                                                      cTGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGAACTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATc                            >  2:4359565/1‑150 (MQ=255)
                                                                                                                       tGGTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGTGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATcc                           <  1:3070294/150‑1 (MQ=255)
                                                                                                                        ggTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATccc                          >  1:3517215/1‑150 (MQ=255)
                                                                                                                        ggTGTTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATccc                          >  2:5209032/1‑150 (MQ=255)
                                                                                                                         gtgtTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCg                         >  2:1073947/1‑150 (MQ=255)
                                                                                                                          tgtTTCTCTATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCgg                        >  1:2851044/1‑150 (MQ=255)
                                                                                                                               ctctATCTCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTAtt                   <  1:1000882/150‑1 (MQ=255)
                                                                                                                               ctctATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTAtt                   <  1:1878600/150‑1 (MQ=255)
                                                                                                                               ctctATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTAtt                   >  2:2229604/1‑150 (MQ=255)
                                                                                                                                tctATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTg                  <  2:1292877/150‑1 (MQ=255)
                                                                                                                                tctATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTg                  <  1:81362/150‑1 (MQ=255)
                                                                                                                                 ctATATCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGc                 <  1:636028/150‑1 (MQ=255)
                                                                                                                                  tataTCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGcc                >  1:4630722/1‑150 (MQ=255)
                                                                                                                                  tataTCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGcc                <  2:2477065/150‑1 (MQ=255)
                                                                                                                                     atCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCt             >  1:3118944/1‑150 (MQ=255)
                                                                                                                                     atCTGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCt             <  2:1634865/150‑1 (MQ=255)
                                                                                                                                        tGGTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGc          >  1:5329250/1‑150 (MQ=255)
                                                                                                                                         ggTTGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGct         <  2:902583/150‑1 (MQ=255)
                                                                                                                                           ttGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGctct       <  2:3116889/150‑1 (MQ=255)
                                                                                                                                            tGCCGTTACTGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCCTTGGTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTa      <  2:793946/150‑1 (MQ=255)
                                                                                                                                            tGCCGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTa      >  1:3164417/1‑150 (MQ=255)
                                                                                                                                             gCCGTTAATGATCCTGCCCGGTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTAt     <  2:4011217/150‑1 (MQ=255)
                                                                                                                                               cGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCt   >  2:5064839/1‑150 (MQ=255)
                                                                                                                                               cGTTAATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCt   <  1:3140773/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
AGATGGCGTGGCTCAGTGGTTTTTACAACATCTTGGGCTGGAACCACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTCATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTT  >  CP009273/1508534‑1508827

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑