| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,514,177 | G→T | 100% | E298D (GAG→GAT) | curA → | curcumin/dihydrocurcumin reductase, NADPH‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,514,177 | 0 | G | T | 99.6% | 1057.8 / ‑4.5 | 341 | E298D (GAG→GAT) | curA | curcumin/dihydrocurcumin reductase, NADPH‑dependent |
| Reads supporting (aligned to +/- strand): ref base G (3/1); new base T (207/130); total (210/131) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 344 total aligned reads displayed.
AGTGAGCAGCTATAACGCTACAGAGCTACCACCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGAGATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAA > CP009273/1514030‑1514322 | tGAGCAGCTATAACGCTACAGAGCGACCACCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATgg < 1:614592/150‑1 (MQ=255) agcagcTATAACGCTACAGAGCTACCACCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATgggg > 2:3900801/1‑150 (MQ=255) agcTATAACTCTACAGAGCTACCACCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGATGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCaa < 2:4324323/150‑1 (MQ=255) tataACGCTACAGAGCTACCACCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCCATgg > 1:4395250/1‑150 (MQ=255) ataACGCTACAGAGCTACCACCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCTGAGGGATATGGGGCAATggg > 2:4580448/1‑150 (MQ=255) ataACGCTACAGAGCTACCACCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATggg > 2:1948349/1‑150 (MQ=255) taACGCTACAGAGCTACCACCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGt < 1:3237189/150‑1 (MQ=255) taACGCTACAGAGCTACCACCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGt < 1:3367862/150‑1 (MQ=255) taACGCTACAGAGCTACCACCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTATTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGt < 1:5172592/150‑1 (MQ=255) cTACAGAGCTACCACCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAag < 2:1826183/150‑1 (MQ=255) tACAGAGCTACCACCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAaga < 1:3681226/150‑1 (MQ=255) gCTACCACCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATaa < 2:947394/150‑1 (MQ=255) ccaccCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATc > 1:1426178/1‑150 (MQ=255) caccCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATcc > 1:4620179/1‑150 (MQ=255) accCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCa > 1:2109280/1‑150 (MQ=255) accCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCa < 2:4838221/150‑1 (MQ=255) accCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCa > 2:821724/1‑150 (MQ=255) accCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGAGATGGGGCAATGGGTGAAAGAGGATAAAATCCa > 2:527011/1‑150 (MQ=255) ggTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTAc > 1:4951268/1‑150 (MQ=255) gTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTAcc < 1:1162618/150‑1 (MQ=255) cGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACcgcg > 2:5155647/1‑150 (MQ=255) ggATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCga > 2:1586456/1‑150 (MQ=255) gATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCgaa > 2:3283200/1‑150 (MQ=255) gATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCgaa > 2:3614001/1‑150 (MQ=255) aTCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCgaag < 2:1658099/150‑1 (MQ=255) cGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCgaagaa > 1:3095496/1‑150 (MQ=255) ttACCTCTGTTGATTGCTACAGTGCTGAAAAAACTGATTCGCTTGCCATGTTTTATTATAGCTCAGGAATATGGTCAACGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTTAAAGAGGATAAAATCAACTACCTAGAACAAAtt < 2:2338795/150‑1 (MQ=255) ttACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAAtt > 2:2699454/1‑150 (MQ=255) ttACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAAtt < 1:1659267/150‑1 (MQ=255) ctctGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTg < 2:1328592/150‑1 (MQ=255) gTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACgg > 1:570243/1‑150 (MQ=255) tGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGtt > 1:4212287/1‑150 (MQ=255) gATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGttt > 2:3779991/1‑150 (MQ=255) aTGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTa > 1:2056599/1‑150 (MQ=255) aCAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTGTAGAGAAt > 2:3386766/1‑150 (MQ=255) aGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATgc > 1:1536032/1‑150 (MQ=255) gCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGcc > 1:3027097/1‑150 (MQ=255) gCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGcc > 1:4763705/1‑150 (MQ=255) cTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCca < 1:5059616/150‑1 (MQ=255) cTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCca < 2:3850059/150‑1 (MQ=255) tGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCcac < 1:314799/150‑1 (MQ=255) tGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCcac < 2:3178911/150‑1 (MQ=255) gAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCcaca > 2:4649850/1‑150 (MQ=255) aaaaCGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGAc > 2:4742336/1‑150 (MQ=255) aaaaCGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGAc < 2:376070/150‑1 (MQ=255) aaaaCGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGAc < 2:3692707/150‑1 (MQ=255) aaaCGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACg > 1:3949255/1‑150 (MQ=255) aCGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGtt < 1:2608034/150‑1 (MQ=255) gTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTa < 1:2285988/150‑1 (MQ=255) gTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTa > 2:2010545/1‑150 (MQ=255) gTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTa > 2:4498024/1‑150 (MQ=255) gTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTa > 2:2754371/1‑150 (MQ=255) tATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTAt > 1:2596175/1‑150 (MQ=255) tATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTAt > 1:3856066/1‑150 (MQ=255) tATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTAt < 1:2344348/150‑1 (MQ=255) aTTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGAGATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATc > 2:733842/1‑150 (MQ=255) cGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGc > 2:3643780/1‑150 (MQ=255) ttGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCctg < 2:2376455/150‑1 (MQ=255) ttGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCctg > 2:4488828/1‑150 (MQ=255) gCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTGTATCGGCctgct > 2:2782297/1‑150 (MQ=255) cAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCctgctg > 2:2241547/1‑150 (MQ=255) aaGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGa > 1:3597775/1‑150 (MQ=255) ggTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTCCCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAg < 2:2544549/150‑1 (MQ=255) ggTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAg > 1:1156732/1‑150 (MQ=255) gTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAgg < 2:380556/150‑1 (MQ=255) gTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAgg > 2:1018893/1‑150 (MQ=255) ttttATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAggg < 1:1330281/150‑1 (MQ=255) ttttATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAggg < 2:3068391/150‑1 (MQ=255) tttATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGt > 2:2630865/1‑150 (MQ=255) tttATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTGTATCGGCCTGCTGAAGGGt > 2:3230356/1‑150 (MQ=255) tattatCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTaa < 1:2957666/150‑1 (MQ=255) tattatCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTaa > 2:4924886/1‑150 (MQ=255) ttatCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTaaaa < 1:1018893/150‑1 (MQ=255) ttatCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTaaaa > 1:5191745/1‑150 (MQ=255) tCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACt < 2:4255193/150‑1 (MQ=255) gCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTc < 1:2739082/150‑1 (MQ=255) cTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCg < 1:371387/150‑1 (MQ=255) cTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCg > 1:2441190/1‑150 (MQ=255) cTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCg < 2:1392768/150‑1 (MQ=255) cTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCg < 2:2642669/150‑1 (MQ=255) cTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCg > 1:869638/1‑150 (MQ=255) gATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCaaa > 1:533276/1‑150 (MQ=255) aTTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAg < 1:4126215/150‑1 (MQ=255) aTTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAg > 2:1183215/1‑150 (MQ=255) aTTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAg > 2:5047994/1‑150 (MQ=255) aTTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAg > 1:2175142/1‑150 (MQ=255) ttATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAgt < 2:3796388/150‑1 (MQ=255) tATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAgtg < 1:4092099/150‑1 (MQ=255) tATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAgtg > 1:4439729/1‑150 (MQ=255) aTGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAgtgg > 1:3481395/1‑150 (MQ=255) aTGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAgtgg < 2:1119179/150‑1 (MQ=255) ggTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAgtggtg < 2:2158235/150‑1 (MQ=255) tCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGAt < 2:4905276/150‑1 (MQ=255) tCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGAt > 2:2855598/1‑150 (MQ=255) gCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCcgcg < 2:2056599/150‑1 (MQ=255) cATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCg > 1:2407933/1‑150 (MQ=255) aGTTTCAGAGGGATATGGGGCAATGGGTGAAATAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGAGGGtg < 2:4961428/150‑1 (MQ=255) aGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGtg < 2:4127801/150‑1 (MQ=255) agGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTaa > 1:4816376/1‑150 (MQ=255) agGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTaa > 2:3431444/1‑150 (MQ=255) | AGTGAGCAGCTATAACGCTACAGAGCTACCACCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGAGATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAAA > CP009273/1514030‑1514322 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |