| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,534,409 | G→T | 100% | V813V (GTC→GTA) | narZ ← | nitrate reductase 2 (NRZ), alpha subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,534,409 | 0 | G | T | 99.4% | 924.6 / ‑3.6 | 302 | V813V (GTC→GTA) | narZ | nitrate reductase 2 (NRZ), alpha subunit |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base T (148/150); total (151/151) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.75e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 302 total aligned reads displayed.
TGTGAGAGCTCTGCCGGAGAGTCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCGACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCGGAAGTCGAGCGTCACCAGCAGGTCGAG > CP009273/1534263‑1534555 | tgtgAGAGCTCTGCCGGAGAGTCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTAcc < 2:1627310/150‑1 (MQ=255)tgtgAGAGCTCTGCCGGAGAGTCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTAcc < 2:3040469/150‑1 (MQ=255) agagCTCTGCCGGAGAGTCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTAccgccg < 1:1780709/150‑1 (MQ=255) gagCTCTGCCGGAGAGTCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACcgccgc > 2:4370054/1‑150 (MQ=255) gCTCTGCCGGAGAGTCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAg < 2:725218/150‑1 (MQ=255) ctctGCCGGAGAGTCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGa > 1:5289055/1‑150 (MQ=255) tGCCGGAGAGTCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAg < 1:1430365/150‑1 (MQ=255) ccGGAGAGTCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCg < 2:3215939/150‑1 (MQ=255) cGGAGAGTCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCgg > 2:2619458/1‑150 (MQ=255) cGGAGAGTCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCgg < 1:3051051/150‑1 (MQ=255) agTCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGaa > 2:4073206/1‑150 (MQ=255) agTCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGaa > 1:131118/1‑150 (MQ=255) agTCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGaa < 2:565236/150‑1 (MQ=255) gTCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAAt < 2:3561666/150‑1 (MQ=255) tCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATa < 2:1266464/150‑1 (MQ=255) tGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGCTCTACCGCCGCAGAAAGCGGATGAATAAAc > 1:2180261/1‑150 (MQ=255) tGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAAc < 1:609921/150‑1 (MQ=255) cAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACgg < 2:4429842/150‑1 (MQ=255) cAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACgg > 1:4319882/1‑150 (MQ=255) aGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTACCACACCCGATCTAACCCCCCAGAAAGCGGATGAATAAAAGGa > 1:4501369/1‑150 (MQ=38) gTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGAt < 2:2168420/150‑1 (MQ=255) tAGGGGTGGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTACCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATg < 2:167286/150‑1 (MQ=255) aGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGc < 2:3602815/150‑1 (MQ=255) aGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGc < 2:3799891/150‑1 (MQ=255) ggggTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCa > 2:1992502/1‑150 (MQ=255) gggTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCat < 2:2982542/150‑1 (MQ=255) ggTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCGTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGAGCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCata > 2:1442438/1‑150 (MQ=255) gTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCatat < 2:2770074/150‑1 (MQ=255) gTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCg > 2:5032725/1‑150 (MQ=255) aaTACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAg > 2:589204/1‑150 (MQ=255) tACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGgt < 1:3595718/150‑1 (MQ=255) tACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTACCAGTCGCTGCGTGATTCCCACGCCCGATCTACCGCCGCAGAAAGCGGATGAATAAAAGGATTCATATCCGAGgt > 2:4033687/1‑150 (MQ=255) gaCCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGTTGAATAAACGGATGCATATCCGAGgt < 1:3184013/149‑1 (MQ=255) ccACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGgtgt > 1:4458352/1‑150 (MQ=255) ccACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCCCAGAAAGCGGATGAATAAACGGATGCCTATACGAGgtgt > 1:4520338/1‑150 (MQ=255) cACGTCGGTTTCTTTGCCAAGATGACCCACGCAAACTTGCTAAAATGATTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGAGTGATTACCACGCCGGAACTACCGCAGCAGAAAGCCGATGAATAAACCGATTCATAAACGAGGTGtt > 1:1058028/1‑150 (MQ=25) gTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCat > 2:5305269/1‑150 (MQ=255) ggTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATc > 1:4588058/1‑150 (MQ=255) gTTTCTTTGCCAAGATGACCCACGCACACTTGCTAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCg > 1:2519256/1‑150 (MQ=255) gTTTCTTTGCCAAGATGAACCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGAAGAAAGCGGATGAATAAAAGGATGCATATCCGAGGTGTTCatatag > 2:1124681/1‑148 (MQ=255) tCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCt < 2:3158926/150‑1 (MQ=255) tttGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCttt < 1:2116973/150‑1 (MQ=255) tttGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCGACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCttt < 1:875380/150‑1 (MQ=255) ttGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCtttt < 1:4369329/150‑1 (MQ=255) tGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGGAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCttttt < 2:679848/150‑1 (MQ=255) gCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTc < 2:3360046/150‑1 (MQ=255) ccAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCg < 1:1266636/150‑1 (MQ=255) cAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGt < 1:1738925/150‑1 (MQ=255) aTGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCa < 2:3484587/150‑1 (MQ=255) tGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAg < 1:1252079/150‑1 (MQ=255) cccACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTg < 1:5096792/150‑1 (MQ=255) ccACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTgg < 1:2619458/150‑1 (MQ=255) cACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGc > 1:3338620/1‑150 (MQ=255) cacaCTTGCGANAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTg > 1:2761263/1‑150 (MQ=255) cacaCTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTg > 2:2193179/1‑150 (MQ=255) cacaCTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTg > 2:2317261/1‑150 (MQ=255) acTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGc < 2:4923910/150‑1 (MQ=255) tGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGa < 2:4507968/150‑1 (MQ=255) gCGAAAATGCTGTGGCGAGACCTTTGTAGATTTCCCAGTCGCTGCGTGAGTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGaa < 1:516941/150‑1 (MQ=255) gAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACg < 1:1670925/150‑1 (MQ=255) aaaaTGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTACCACGCCGGATATAACGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGa > 1:2344679/1‑150 (MQ=255) aaaTGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGat < 1:3658289/150‑1 (MQ=255) aaTGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCCGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCCGAACGata > 2:608297/1‑150 (MQ=255) aaTGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGata > 2:3754316/1‑150 (MQ=255) aaTGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGata < 2:2836284/150‑1 (MQ=255) tGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATTAATAAACGGATGCATATACGAGGTTTTCATATAGTCTTTTTCGTAACAGGTGGCGGTGGGCAGAACGAAATc > 1:1599747/1‑150 (MQ=25) cTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCgg < 1:4907666/150‑1 (MQ=255) cTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCgg < 1:3399912/150‑1 (MQ=255) ttGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGgag < 2:2469975/150‑1 (MQ=255) cGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAAca > 1:1165327/1‑150 (MQ=255) cGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATACGAGGTGTTCATATAGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATAAAGGAGAAca > 1:3481599/1‑150 (MQ=25) aTACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATTCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATAGGAGAAcagg > 1:424218/1‑150 (MQ=255) ccTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAAcaggcag < 1:2033658/150‑1 (MQ=255) ccTTTGTAGATTTCCCAGTCGCTGCGTGAGTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAAcaggcag < 2:4247848/150‑1 (MQ=255) ccTTTGTAGATGTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAAcaggcag < 2:4265767/150‑1 (MQ=255) cTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAAcaggcagg < 2:451709/150‑1 (MQ=255) cTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAAcaggcagg < 2:4134637/150‑1 (MQ=255) cTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAAAGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAAcaggcagg > 1:4153055/1‑150 (MQ=255) aGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTgg < 1:2932226/150‑1 (MQ=255) aGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTgg > 1:3279801/1‑150 (MQ=255) aTTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGAc > 2:265154/1‑150 (MQ=255) aTTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGAc > 1:4809970/1‑150 (MQ=255) ttCCCAGTCGCTGCGTGATTACCACGCCGGATAAACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTAGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACAt > 1:2423825/1‑150 (MQ=255) ttCCCAGTCGCTGAGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACAt < 2:787761/150‑1 (MQ=255) tCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATg < 1:2610745/150‑1 (MQ=255) tCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATg < 2:1342993/150‑1 (MQ=255) cccAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATTTCGTCTTTTTCGTACCAGGTGGCGGGGGGCAGAACGATATCGGGGAACAGGCAGGTTCTGGAGATGc > 1:2948891/1‑150 (MQ=25) ccAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCg < 1:821490/150‑1 (MQ=255) cAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCgg > 1:155654/1‑150 (MQ=255) aGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCGGa > 1:3966362/1‑150 (MQ=255) tCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCGGAAg < 2:2366053/150‑1 (MQ=255) tCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCGGAAg > 1:378657/1‑150 (MQ=255) gCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTCCTGGACAGGCGGAAGTc > 2:908353/1‑150 (MQ=255) cTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCGGAAGTCg > 1:101098/1‑150 (MQ=255) tGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCGGAAGTCGa < 1:754485/150‑1 (MQ=255) cGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCGGAAGTCGAGc < 2:2937692/150‑1 (MQ=255) tCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTCCTGGACATGCGGAAGTCGAGCGTCAcc > 2:5159095/1‑150 (MQ=255) cccACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCGGAAGTCGAGCGTCACca < 1:469952/150‑1 (MQ=255) ccACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTCCTGGACCTGCGGAAGTCGAGCGTCACcag > 2:2113192/1‑150 (MQ=255) aTCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCGGAAGTCGAGCGTCACCAGCAGGTCGAg > 1:4119903/1‑150 (MQ=255) | TGTGAGAGCTCTGCCGGAGAGTCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCGACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCGGAAGTCGAGCGTCACCAGCAGGTCGAG > CP009273/1534263‑1534555 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |