| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,570,428 | G→T | 100% | I483I (ATC→ATA) | yddB ← | putative TonB‑dependent outer membrane receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,570,428 | 0 | G | T | 98.8% | 1066.5 / 0.9 | 349 | I483I (ATC→ATA) | yddB | putative TonB‑dependent outer membrane receptor |
| Reads supporting (aligned to +/- strand): ref base G (4/1); new base T (189/155); total (193/156) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 360 total aligned reads displayed.
TTATTACCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGAGATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCAATTCCCAGGCGGCCTTTACCTTTATGGTAAATGGTATGGTTAG > CP009273/1570279‑1570576 | attaCCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGatat > 2:3617374/1‑150 (MQ=255) ttaCCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGAtata > 1:3810854/1‑150 (MQ=255) ttaCCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTACGTCATAAAGCGCGGGGAtata > 2:3399251/1‑150 (MQ=255) taCCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGatatat > 1:4285660/1‑150 (MQ=255) taCCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGatatat > 2:1459507/1‑150 (MQ=255) aCCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATAtt > 1:3722528/1‑150 (MQ=255) ccTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATtg < 2:653952/150‑1 (MQ=255) aTACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGt > 2:2659889/1‑150 (MQ=255) tACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGtt < 2:1074421/150‑1 (MQ=255) aCCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGttt < 1:3556690/150‑1 (MQ=255) cGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTGTGATTAGCAAAAATATCCCATTCCGTCATCACGCGCGGGGCTATATTGTGGTTTGa > 1:115159/1‑150 (MQ=255) gATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATAACCAGAATCTTCCCGCCATAGTAACGGTTATAACCTGCTGTACTCATTGAGGAATGATTAGCAAAAATATCCCATAACGTCAGAAAGCGCGGGGATATCTTGTGGTTTGAc > 1:4865407/1‑150 (MQ=255) aTTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACa > 2:3075325/1‑150 (MQ=255) aTTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACa > 2:590842/1‑150 (MQ=255) ttCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAg < 2:4077453/150‑1 (MQ=255) ccGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGAt < 1:1655832/150‑1 (MQ=255) cGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATAGTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGANa < 1:2810106/150‑1 (MQ=255) tCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATAGTCCCGCCATAGTAACGGTTATAACCTGCTGTTATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGt < 2:398212/150‑1 (MQ=255) cAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTg < 1:3943976/150‑1 (MQ=255) aGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTgt < 1:4411997/150‑1 (MQ=255) aGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTgt > 1:582811/1‑150 (MQ=255) gCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTgtc < 2:379084/150‑1 (MQ=255) ttGTGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTgtcatag < 1:3173527/150‑1 (MQ=255) gCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTgtcatagtc < 1:1718378/150‑1 (MQ=255) gCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTgtcatagtc < 2:1591054/150‑1 (MQ=255) atCACGTAATCCCATATCAAGAATATTCACGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTTTAATAGTAATACCg > 1:1989682/1‑150 (MQ=255) cACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCa > 1:3285010/1‑150 (MQ=255) cACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCa > 2:2322584/1‑150 (MQ=255) aaTCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCg > 2:390102/1‑150 (MQ=255) cccATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGc > 2:4487559/1‑150 (MQ=255) cccATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGAGATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGc > 1:3470490/1‑150 (MQ=255) ccATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCa < 2:1514863/150‑1 (MQ=255) atatCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCAtt < 1:3649375/150‑1 (MQ=255) tatCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTa < 2:814296/150‑1 (MQ=255) tatCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGAGATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTa < 1:2663289/150‑1 (MQ=255) tCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAAt > 1:1459556/1‑150 (MQ=255) tCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAAt < 1:4111006/150‑1 (MQ=255) gAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGaca > 2:468750/1‑150 (MQ=255) gAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGaca > 1:133884/1‑150 (MQ=255) tatTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCAGGGCATTAATGACACAt > 2:1963852/1‑150 (MQ=255) atTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACAtt < 2:4420307/150‑1 (MQ=255) atTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACAtt > 1:3851247/1‑150 (MQ=255) atTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGAGATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACAtt > 2:3416033/1‑150 (MQ=255) ttCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTa < 1:359994/150‑1 (MQ=255) ccATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAg > 2:1892190/1‑150 (MQ=255) cATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGc > 2:2246197/1‑150 (MQ=255) aGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGGTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTaa > 2:5123819/1‑150 (MQ=255) gTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAAt < 1:2154399/150‑1 (MQ=255) gTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAAt > 1:5111212/1‑150 (MQ=255) gTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGC‑AAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATg > 2:4740026/1‑150 (MQ=255) catcttATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGACATCAGGAGCGGGGATATATTGTGGATTGACAGATAGTTGTCAGAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCg > 1:4173624/5‑150 (MQ=255) aCGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCAGGGCATTAATGACACATTACGCCAGCTAATGCg < 1:4581799/150‑1 (MQ=255) gTTATAACCTGCTGTAATCATTGAGGTTTGATTATCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATc < 1:2508454/150‑1 (MQ=255) gTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATc > 2:2717310/1‑150 (MQ=255) ttATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATcc < 1:1383822/150‑1 (MQ=255) ttATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATcc < 1:4730358/150‑1 (MQ=255) aaCCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCa > 1:78975/1‑150 (MQ=255) aCCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCat > 2:1256497/1‑150 (MQ=255) tgctgTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCAtata < 2:1288985/150‑1 (MQ=255) gctgTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATAc < 1:4152318/150‑1 (MQ=255) ctgTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACa > 2:766392/1‑150 (MQ=255) aaTCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCgt > 2:3318357/1‑150 (MQ=255) aTCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCgtg < 1:1586124/150‑1 (MQ=255) aTCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCgtg > 1:2335361/1‑150 (MQ=255) aTTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAg < 2:5273226/150‑1 (MQ=255) aTTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAg > 2:2968024/1‑150 (MQ=255) aTTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAg < 1:4049818/150‑1 (MQ=255) aTTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAg > 1:23051/1‑150 (MQ=255) gAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTg > 1:518581/1‑150 (MQ=255) gAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTg > 1:889738/1‑150 (MQ=255) aGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGt > 2:2352481/1‑150 (MQ=255) gTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCAGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCa < 2:4340148/150‑1 (MQ=255) tttGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCaa < 1:2467891/150‑1 (MQ=255) tGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGTGATCCGCCATATACAGCGTGTAGTTGTCAAtt < 1:1814871/150‑1 (MQ=255) aTTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCAATTcc > 1:4370588/1‑150 (MQ=255) ttAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCAATTccc < 2:1362187/150‑1 (MQ=255) aGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCAATTCCCAg > 2:2552987/1‑150 (MQ=255) aaaaTATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCAATTCCCAggcgg > 1:970956/1‑150 (MQ=255) aaaTATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCAATTCCCAggcggc > 1:1268943/1‑150 (MQ=255) aaTATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCAATTCCCAGGCGGcc > 2:3827613/1‑150 (MQ=255) aaTATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCAATTCCCAGGCGGcc < 1:4394598/150‑1 (MQ=255) aaTATCCCATTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCAGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCAATTCCCAGGCGGcc > 1:458734/1‑150 (MQ=255) aTTCCGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCAATTCCCAGGCGGcctttacctt < 2:5055602/150‑1 (MQ=255) cGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCAATTCCCAGGCGGCCTTTACCTTTATg < 2:5040966/150‑1 (MQ=255) cGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCAATTCCCAGGCGGCCTTTACCTTTATg < 1:1009019/150‑1 (MQ=255) cGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCAATTCCCAGGCGGCCTTTACCTTTATg < 1:3004269/150‑1 (MQ=255) cGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCAATTCCCAGGCGGCCTTTACCTTTATg < 1:5259851/150‑1 (MQ=255) cGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCAATTCCCAGGCGGCCTTTACCTTTATg < 1:4694337/150‑1 (MQ=255) cGTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCAGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCAATTCCCAGGCGGCCTTTACCTTTATg > 1:2001526/1‑150 (MQ=255) gTCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCAATTCCCAGGCGGCCTTTACCTTTATgg > 2:326434/1‑150 (MQ=255) tCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCAATTCCCAGGCGGCCTTTACCTTTATGGt > 2:4189735/1‑150 (MQ=255) tCATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCAATTCCCAGGCGGCCTTTACCTTTATGGt > 1:668505/1‑150 (MQ=255) cATAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCAATTCCCAGGCGGCCTTTACCTTTATGGTa > 1:813335/1‑150 (MQ=255) aTAAAGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCAATTCCCAGGCGGCCTTTACCTTTATGGTaa > 1:1746712/1‑150 (MQ=255) aGCGCGGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCAATTCCCAGGCGGCCTTTACCTTTATGGTAAatgg > 1:1877489/1‑150 (MQ=255) cgcgGGGATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCAATTCCCAGGCGGCCTTTACCTTTATGGTAAatggta < 2:4285660/150‑1 (MQ=255) ggggATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCAATTCCCAGGCGGCCTTTACCTTTATGGTAAatggtatgg > 2:29253/1‑150 (MQ=255) gggATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCAATTCCCAGGCGGCCTTTACCTTTATGGTAAatggtatggt > 2:2455077/1‑150 (MQ=255) gggATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCAATTCCCAGGCGGCCTTTACCTTTATGGTAAatggtatggt > 2:1192797/1‑150 (MQ=255) ggATATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATCTACAGCGTGTAGTTGTCAATTCCCAGGCGTCCTTTACCTTTATGGTAAATGGTATGGtt > 2:279923/1‑150 (MQ=255) | TTATTACCTGATACCGATTCCGTCCAGCTATTGCGGATATCACGTAATCCCATATCAAGAATATTCCCGCCATAGTAACGGTTATAACCTGCTGTAATCATTGAGGTTTGATTAGCAAAAATATCCCATTCCGTCATAAAGCGCGGGGAGATATTGTGGTTTGACAGATAGTTGTCATAGTCATACCGCACGCCGGGCATTAATGACACATTACGCCAGCTAATGCGATCCGCCATATACAGCGTGTAGTTGTCAATTCCCAGGCGGCCTTTACCTTTATGGTAAATGGTATGGTTAG > CP009273/1570279‑1570576 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |