| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,586,743 | A→T | 8.7% | intergenic (‑44/+179) | hipB ← / ← yneO | antitoxin of HipAB toxin‑antitoxin system/pseudogene, AidA homolog |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,586,743 | 0 | A | T | 8.7% | 1044.6 / 63.3 | 343 | intergenic (‑44/+179) | hipB/yneO | antitoxin of HipAB toxin‑antitoxin system/pseudogene, AidA homolog |
| Reads supporting (aligned to +/- strand): ref base A (148/165); new base T (15/15); total (163/180) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 354 total aligned reads displayed.
CAATTTTTTTCGCCAGCTCGCTCTGCGTCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGC > CP009273/1586594‑1586892 | cAATTTTTTTCGCCAGCTCGCTCTGCGTCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATtata < 2:3489694/150‑1 (MQ=255) aaTTTTTTTCGCCAGCTCGCTCTGCGTCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATaa > 2:4154026/1‑150 (MQ=255) aTTTTTTTCGCCAGCACGCTCTGCGTCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAg > 2:2500721/1‑150 (MQ=255) tttttCGCCAGCTCGCTCTGCGTCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATTAGttt < 2:795813/150‑1 (MQ=255) tttttCGCCAGCTCGCTCTGCGTCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGttt < 2:396733/150‑1 (MQ=255) tttttCGCCAGCTCGCTCTGCGTCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGttt < 1:875752/150‑1 (MQ=255) ttCGCCAGCTCGCTCTGCGTCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTAt < 2:2070433/150‑1 (MQ=255) tCGCCAGCTCGCTCTGCGTCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATc < 2:4380706/150‑1 (MQ=255) cGCCAGCTCGCTCTGCGTCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATcc > 2:4672861/1‑150 (MQ=255) cGCCAGCTCGCTCTGCGTCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATcc > 1:4957860/1‑150 (MQ=255) gCCAGCTCGCTCTGCGTCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCt > 1:1756713/1‑150 (MQ=255) ccAGCTCGCTCTGCGTCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATAGTATTAGTTTTATCCtt > 1:1359950/1‑150 (MQ=255) cAGCTCGCTCTGCGTCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCttt > 2:1377713/1‑150 (MQ=255) aGCTCGCTCTGCGTCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTa > 1:3817508/1‑150 (MQ=255) aGCTCGCTCTGCGTCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTa < 1:5205959/150‑1 (MQ=255) gctcgctcTGCGTCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAg < 1:1086303/150‑1 (MQ=255) ctcgctcTGCGTCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTatt < 1:2706619/150‑3 (MQ=255) cgctcTGCGTCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGa < 2:724329/150‑1 (MQ=255) cgctcTGCGTCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGa < 2:1667273/150‑1 (MQ=255) gctcTGCGTCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAg > 1:4397934/1‑150 (MQ=255) gctcTGCGTCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAg < 1:4924755/150‑1 (MQ=255) gctcTGCGTCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAg < 2:4585205/150‑1 (MQ=255) tctGCGTCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGa < 2:1484530/150‑1 (MQ=255) ctGCGTCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGAt < 2:243592/150‑1 (MQ=255) ctGCGTCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGAt > 1:3278423/1‑150 (MQ=255) gCGTCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATaa > 2:1854129/1‑150 (MQ=255) cGTCCAGCCATTTTGCTGGCGAACCAGTTTCAGTGCATTCGCCAATTGCGTTGGGATATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAg < 1:4558600/150‑1 (MQ=255) tCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTc < 2:5218446/150‑1 (MQ=255) ccAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATTAGTTTTATCCTTTAGTGAGGATAAGTCa > 1:4501032/1‑150 (MQ=255) cAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCaa < 1:1513132/150‑1 (MQ=255) cAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCaa > 1:2657795/1‑150 (MQ=255) aTTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTgg > 2:2952139/1‑150 (MQ=255) ttGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGaaa > 1:1459026/1‑150 (MQ=255) ttGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGaaa > 2:3112318/1‑150 (MQ=255) ggCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACAt < 2:954886/150‑1 (MQ=255) ggCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGAGATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACAt > 1:2005908/1‑150 (MQ=255) gAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCtt > 1:4318966/1‑150 (MQ=255) aCCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTAt < 1:3401594/150‑1 (MQ=255) ttCATTACATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGctc < 1:5022285/150‑1 (MQ=255) cATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGa > 1:3004731/1‑150 (MQ=255) atccGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGAt > 1:5293863/4‑150 (MQ=255) tCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACTTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATTAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATaa > 1:2263404/1‑150 (MQ=255) gCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCATGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAAc < 1:621575/150‑1 (MQ=255) gCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAAc < 2:1162009/150‑1 (MQ=255) gTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGata > 1:2905173/1‑150 (MQ=255) ttGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGatat < 2:375087/150‑1 (MQ=255) tGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATc > 1:4664084/1‑150 (MQ=255) tGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATc < 2:1557365/150‑1 (MQ=255) tGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATc > 2:5101691/1‑150 (MQ=255) gggCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATcc < 2:3888096/150‑1 (MQ=255) cTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATTAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTCTCCGCTCTACGGGATAAACGCTGCGATATCcgcg < 2:1781254/150‑1 (MQ=255) aGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATcg < 2:840607/150‑1 (MQ=255) gATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATcga > 1:129770/1‑149 (MQ=255) ctGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATaa < 1:4059783/150‑1 (MQ=255) gAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATaaaa > 2:4003460/1‑150 (MQ=255) aGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAagg < 2:3195301/150‑1 (MQ=255) cTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAaggag > 1:2446062/1‑150 (MQ=255) cTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAaggag < 1:214058/150‑1 (MQ=255) atcatGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGAGATTATAAGTTTTATCCGTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAGGGCGGAt > 1:13756/1‑150 (MQ=255) tcatGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGAtt < 1:5230880/150‑1 (MQ=255) tcatGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGAtt < 1:3720581/150‑1 (MQ=255) catGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGAttt < 2:4914890/150‑1 (MQ=255) catGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGAttt > 1:2512716/1‑150 (MQ=255) atGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATTAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTa < 2:4411477/150‑1 (MQ=255) tGTAATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTGTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTaa < 1:307951/150‑1 (MQ=255) tCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAAt < 2:1265261/150‑1 (MQ=255) cATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATa < 2:4957863/150‑1 (MQ=255) cATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATa < 2:2566364/150‑1 (MQ=255) aTACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATaa < 1:1888353/150‑1 (MQ=255) tACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAg < 2:3080545/150‑1 (MQ=255) gTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCg > 1:892763/1‑150 (MQ=255) tCCACAGCAAGTTTATCCGCTTAAGGGGATATTATTAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGt > 2:1982221/1‑150 (MQ=255) ccACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGtt < 1:579697/150‑1 (MQ=255) ccACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGtt > 2:3612400/1‑150 (MQ=255) cacaGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTACATAAGGCGTTg < 1:2768409/150‑1 (MQ=255) acaGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGa > 2:2730276/1‑150 (MQ=255) acaGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGa < 2:2657795/150‑1 (MQ=255) caGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTCTCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGAt < 2:4134310/150‑1 (MQ=255) aGCAAGTTTATCCGCTTAAGGGGATATTATTAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATg < 2:508251/150‑1 (MQ=255) aGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATg > 1:1583146/1‑150 (MQ=255) cAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATgcg < 2:5041050/150‑1 (MQ=255) aGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGcc > 1:4385310/1‑150 (MQ=255) tATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGttt < 2:3336598/150‑1 (MQ=255) aTCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGtttt > 2:5256162/1‑149 (MQ=255) tCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGtttta > 2:4658913/1‑148 (MQ=255) cGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTTAAg > 1:1141696/1‑150 (MQ=255) gCTTAA‑GGGATATTATTAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTTAAGTc < 1:3660322/150‑1 (MQ=255) cTTAAGGTGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTTAAGTc < 2:3541692/150‑1 (MQ=255) ttAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTTAAGTCg < 1:4738030/150‑1 (MQ=255) tAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTTAAGTCgg > 1:3178075/1‑150 (MQ=255) tAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTTAAGTCgg > 2:588962/1‑150 (MQ=255) ggATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTTAAGTCGGCAata > 1:2592759/1‑150 (MQ=255) gATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTTAAGTCGGCAatat < 1:3112318/150‑1 (MQ=255) atatTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTTAAGTCGGCAATAtt < 2:2998165/150‑1 (MQ=255) atatTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTTAAGTCGGCAATAtt > 1:783793/1‑150 (MQ=255) atatTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTTAAGTCGGCAATAtt < 2:1068330/150‑1 (MQ=255) attatAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTTAAGTCGGCAATATTaa > 1:3868154/1‑150 (MQ=255) ttatAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTTAAGTCGGCAATATTAAg < 2:45331/150‑1 (MQ=255) ataAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTTAAGTCGGCAATATTAAGcc > 2:2169511/1‑150 (MQ=255) ataAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTTAAGTCGGCAATATTAAGcc > 2:2314458/1‑150 (MQ=255) | CAATTTTTTTCGCCAGCTCGCTCTGCGTCCAGCCATTTTGCTGGCGAACCAGTTTCATTGCATTCGCCAATTGCGTTGGGCTATAGATCTTCTGAAAGCTCATCATGTCATACGTCCACAGCAAGTTTATCCGCTTAAGGGGATATTATAAGTTTTATCCTTTAGTGAGGATAAGTCAATCTGGAAACACATCTTATCCGCTCTACGGGATAAACGCTGCGATATCCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGC > CP009273/1586594‑1586892 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |