| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,590,878 | A→T | 100% | pseudogene (1367/5323 nt) | yneO ← | pseudogene, AidA homolog |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,590,878 | 0 | A | T | 100.0% | 1124.4 / ‑6.7 | 348 | pseudogene (1367/5323 nt) | yneO | pseudogene, AidA homolog |
| Reads supporting (aligned to +/- strand): ref base A (1/0); major base T (190/156); minor base G (1/0); total (192/156) | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 353 total aligned reads displayed.
TATTAACTATCCCCTTACCGGAGGCATTTCCTCCGATAAATCCATAGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCATCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCACATT > CP009273/1590732‑1591024 | tatTAACTATCCCCTTACCGGAGGCATTTCCTCCGATAAATCCATAGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCa > 1:2162457/1‑150 (MQ=255) aaCTATCCCCTTACCGGAGGCATTTCCTCCGATAAATCCATAGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGtt < 2:3169338/150‑1 (MQ=255) aaCTATCCCCTTACCGGAGGCATTTCCTCCGATAAATCCATAGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGtt > 2:722300/1‑150 (MQ=255) aCTATCCCCTTACCGGAGGCATTTCCTCCGATAAATCCATAGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTc < 2:4448403/150‑1 (MQ=255) cTATCCCCTTACCGGAGGCATTTCCTCCGATAAATCCATAGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCa > 2:1221116/1‑150 (MQ=255) aTCCCCTTACCGGAGGCATTTCCTCCGATAAATCCATAGCCCGGTGAATTAAGGGTGGCACCATGACTGACATTTACGATACCGCTACCAAAATTACCGACAGTGAGACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAgt > 2:1912296/1‑150 (MQ=255) ccccTTACCGGAGGCATTTCCTCCGATAAATCCATAGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAgtgt > 1:2123277/1‑150 (MQ=255) cccTTACCGGAGGCATTTCCTCCGATAAATCCATAGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGtgtg > 1:1558780/1‑150 (MQ=255) ttACCGGAGGCATTTCCTCCGATAAATCCATAGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACTATACCGCTACCAAAAATACAGACATTTATAACCACAGTATCGAACGATGATGTCGCATACTTCAGGTTCAGTTTGCCg > 1:1809597/1‑150 (MQ=255) tACCGGAGGCATTTCCTCCGATAAATCCATAGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATGACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGa < 1:4403147/150‑1 (MQ=255) cGGAGGCATTTCCTCCGATAAATCCATAGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATAc < 1:1889865/150‑1 (MQ=255) ttCCTCCGATAAATCCATAGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCgcttgctt < 1:3801729/150‑1 (MQ=255) ttCCTCCGATAAATCCATAGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCgcttgctt < 1:3962545/150‑1 (MQ=255) tcctccGATAAATCCATAGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCttt < 2:400930/150‑1 (MQ=255) tcctccGATAAATCCATAGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCttt > 1:4026498/1‑150 (MQ=255) ctccGATAAATCCATAGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTAt < 2:4839722/150‑1 (MQ=255) ctccGATAAATCCATAGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTAt > 1:2481179/1‑150 (MQ=255) ctccGATAAATCCATAGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTAt < 2:1739728/150‑1 (MQ=255) ccGATAAATCCATAGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCg > 1:1293117/1‑150 (MQ=255) ccGATAAATCCAGAGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCg < 1:4987015/150‑1 (MQ=255) gATAAATCCATAGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGcc > 1:1077047/1‑150 (MQ=255) aTAAATCCATAGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGccc > 1:4957416/1‑150 (MQ=255) tAAATCCATAGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCa < 2:2824304/150‑1 (MQ=255) aaaTCCATAGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCaa < 2:2262537/150‑1 (MQ=255) aaaTCCATAGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCaa > 1:2243633/1‑150 (MQ=255) tCCATAGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCaaaaa < 1:747983/150‑1 (MQ=255) aTAGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGt < 1:3101670/150‑1 (MQ=255) aGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTaa < 2:2352365/150‑1 (MQ=255) cccGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAata < 2:5096834/150‑1 (MQ=255) ccGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAatat < 1:5239248/150‑1 (MQ=255) ccGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAatat < 2:2755568/150‑1 (MQ=255) ccGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAatat < 1:2662309/150‑1 (MQ=255) cGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATAtt < 2:2688252/150‑1 (MQ=255) ttGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATAtttt > 2:14703/1‑150 (MQ=255) ttGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATAtttt < 2:1569370/150‑1 (MQ=255) gAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGc > 1:5041920/1‑150 (MQ=255) aaTTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCg < 1:1362597/150‑1 (MQ=255) aaGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATAc > 2:5292306/1‑150 (MQ=255) tGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACt > 1:987955/1‑150 (MQ=255) ggCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACtt > 1:26197/1‑150 (MQ=255) cATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGc > 2:3404115/1‑150 (MQ=255) aTTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGcc > 1:4775913/1‑150 (MQ=255) aCTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATc > 2:800536/1‑150 (MQ=255) aCATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTa > 2:2362336/1‑150 (MQ=255) aTTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAat > 2:2598865/1‑150 (MQ=255) aTTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAat < 2:4219959/150‑1 (MQ=255) aTTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAat > 1:1285156/1‑150 (MQ=255) aTTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAat < 1:4340336/150‑1 (MQ=255) tttACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAata > 1:4636391/1‑150 (MQ=255) ttACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAatat > 2:3770709/1‑150 (MQ=255) aTACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAgg < 1:2839206/150‑1 (MQ=255) tACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCTCATCCTTCATGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGt < 1:3340357/150‑1 (MQ=255) tACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGt > 1:3383232/1‑150 (MQ=255) gCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTcc > 2:4666656/1‑150 (MQ=255) gCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTcc < 1:4102009/150‑1 (MQ=255) cTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCg < 1:3920460/150‑1 (MQ=255) aaaTTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCACTAATATTGAGGTTTCCGACGccc > 1:4852983/1‑150 (MQ=255) aaTTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCg > 1:4942977/1‑150 (MQ=255) aaTTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCg > 2:3650377/1‑150 (MQ=255) aaTTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCg > 1:4323085/1‑150 (MQ=255) ttACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCa > 2:2570803/1‑150 (MQ=255) tACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCTGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCaa > 2:3556161/1‑150 (MQ=255) aCCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAac > 1:4445354/1‑150 (MQ=255) ccGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAaca > 2:4556934/1‑150 (MQ=255) gACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACAcc > 1:2076360/1‑150 (MQ=255) gACATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACAcc > 2:4768264/1‑150 (MQ=255) aCATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCa < 1:3837945/150‑1 (MQ=255) aCATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCAGCGCTAATATTGAGGTTTCCGACGCCCGCAACAccc > 2:2874902/1‑149 (MQ=255) cATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCaa < 1:2198825/150‑1 (MQ=255) cATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCaa < 2:3809236/150‑1 (MQ=255) cATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCaa < 1:3064202/150‑1 (MQ=255) cATTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCaa > 2:4173916/1‑150 (MQ=255) aTTGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAAt < 2:3129813/150‑1 (MQ=255) tGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAAtgg > 2:2465605/1‑150 (MQ=255) tGATACCCACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAAtgg < 1:780053/150‑1 (MQ=255) ccACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCTATGGTGGtat < 2:3259574/150‑1 (MQ=255) ccACAGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGtat < 2:1162245/150‑1 (MQ=255) cacaGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGtata > 1:4556596/1‑150 (MQ=255) cacaGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGtata > 2:2183966/1‑150 (MQ=255) acaGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAg > 1:534526/1‑150 (MQ=255) caGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGa < 1:761307/150‑1 (MQ=255) aGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGAc > 1:1628667/1‑150 (MQ=255) aGTATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGAc > 1:4288816/1‑150 (MQ=255) tATCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACAt < 1:5204088/150‑1 (MQ=255) aTCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACAtt < 1:513298/150‑1 (MQ=255) aTCGAACGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACAtt < 1:366769/150‑1 (MQ=255) aCGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTAt < 2:888902/150‑1 (MQ=255) cGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTAtt < 2:3865902/150‑1 (MQ=255) cGATGATGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTAtt < 1:3563415/150‑1 (MQ=255) cGATGATGTCGCATCCTTCAGGTTCAGTGTGCAGATACCGCTTGCTTTAACGCCCAAAAAATTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTAtt < 2:1809597/150‑1 (MQ=255) gatgatGTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTg < 2:4363428/150‑1 (MQ=255) atgatgTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATATACATTCTTATTGa > 1:2802402/1‑150 (MQ=255) tgatgTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGAc > 1:2550472/1‑150 (MQ=255) gTCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATATACATTCTTATTGACCTcc > 2:1958318/1‑150 (MQ=255) tCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTccc > 2:306398/1‑150 (MQ=255) tCGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCACCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTccc < 2:2978389/150‑1 (MQ=255) cGCATCCTTCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCca < 1:1954633/150‑1 (MQ=255) catccttcAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCcaca < 2:3905816/150‑1 (MQ=255) atccttcAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAAAGGTGGTATAGACATTCTTATTGACCTCCCACAt > 1:90880/1‑150 (MQ=255) tccttcAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCACAtt < 1:2335916/150‑1 (MQ=255) | TATTAACTATCCCCTTACCGGAGGCATTTCCTCCGATAAATCCATAGCCCGTTGAATTAAGGGTGGCACCATTACTGACATTTACGATACCGCTACCAAAATTACCGACATTGATACCCACAGTATCGAACGATGATGTCGCATCCATCAGGTTCAGTGTGCCGATACCGCTTGCTTTATCGCCCAAAAAAGTAATATTTTGCGATACGAACTTACCGCCATCGCTAATATTGAGGTTTCCGACGCCCGCAACACCAATGGTGGTATAGACATTCTTATTGACCTCCCACATT > CP009273/1590732‑1591024 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |