| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,649,465 | T→C | 5.3% | intergenic (‑67/+139) | rspA ← / ← ynfA | bifunctional D‑altronate/D‑mannonate dehydratase/UPF0060 family inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,649,465 | 0 | T | C | 5.3% | 980.6 / 33.2 | 317 | intergenic (‑67/+139) | rspA/ynfA | bifunctional D‑altronate/D‑mannonate dehydratase/UPF0060 family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (126/173); new base C (4/13); total (130/187) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.04e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.37e-01 | |||||||||||
Only 100 of 328 total aligned reads displayed.
ATACCGTCCTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGATTTATGTTCCTACGTGCGCC > CP009273/1649316‑1649614 | ccGTCCTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGtata < 2:1656650/150‑1 (MQ=255) ccGTCCTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGtata < 2:3795267/150‑1 (MQ=255) tcatCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAg < 1:2769713/147‑1 (MQ=255) cTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGGATAAAGAt < 1:108093/150‑1 (MQ=255) tCAGTGGTGATTTTTAATGTGACGATATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATc < 2:3038894/150‑1 (MQ=255) gtggtgATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑aa > 2:4276050/1‑150 (MQ=255) tggtgATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑aaa < 1:5191214/150‑1 (MQ=255) gtgATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑aaaaa < 1:3826742/150‑1 (MQ=255) tAATGTGACGAAATTACGCCCCGGACATGTAACAAAATCTTCAGCCTTGACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCTACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAg < 2:2929279/150‑1 (MQ=255) aaTGTGACGAAATTACGCCCTGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AGAAAAGCCGGAGt < 1:2539806/150‑1 (MQ=255) aaTGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGt < 2:936321/150‑1 (MQ=255) aaTGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGt > 2:803165/1‑150 (MQ=255) aaTGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGt < 2:4087140/150‑1 (MQ=255) tgtgACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGCATAAAGATCG‑AAAAAAGCCGGAGTGa < 1:4228826/150‑1 (MQ=255) tgACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATc < 1:450389/150‑1 (MQ=255) aCGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATcac > 2:3285845/1‑150 (MQ=255) aCGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCCTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATcac < 2:5094627/150‑1 (MQ=255) gAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACaa > 2:247362/1‑150 (MQ=255) aaaTTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACaaa > 1:1313891/1‑150 (MQ=255) aaTTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACaaaa > 1:828986/1‑150 (MQ=255) aCGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAg < 1:2851920/150‑1 (MQ=255) cGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAgg < 2:215880/150‑1 (MQ=255) cGCCCCGGACAGGTAACAAAAACTTCAGACTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCTTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAgg < 1:3161687/150‑1 (MQ=255) gCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGc < 1:1417043/150‑1 (MQ=255) cccGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGt < 2:211030/150‑1 (MQ=255) cGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGtat < 1:429112/150‑1 (MQ=255) cAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATAttt < 2:3462997/150‑1 (MQ=255) gTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGCATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTgcg < 2:4985251/150‑1 (MQ=255) aaCAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCt < 2:3073825/150‑1 (MQ=255) aaCAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCt > 2:3720700/1‑150 (MQ=255) aCAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCtg > 2:4889137/1‑150 (MQ=255) aaaaaCTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGTGCtgtg < 1:213275/150‑1 (MQ=255) aaaaaCTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCtgtg > 1:3550825/1‑150 (MQ=255) aaaaaCTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCtgtg > 2:1781468/1‑150 (MQ=255) aaaCTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGaa < 1:2196842/150‑1 (MQ=255) aaCTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCTCTGTGAAt < 1:1241726/150‑1 (MQ=255) tcatcatttACGATCTTCATGTTCTATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCTGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGtt < 2:4961442/144‑1 (MQ=255) tCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGtt < 1:700750/150‑1 (MQ=255) cAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTg > 2:4656088/1‑150 (MQ=255) aGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGa > 2:714031/1‑150 (MQ=255) cTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACaa < 2:4521498/150‑1 (MQ=255) ttACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACaaaa < 2:2619969/150‑1 (MQ=255) ttACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACaaaa > 1:800236/1‑150 (MQ=255) tACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAg < 1:3031392/150‑1 (MQ=255) aCGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGa < 1:3682626/150‑1 (MQ=255) cGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGAt < 2:1748808/150‑1 (MQ=255) gATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATg > 1:1925877/1‑150 (MQ=255) gATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATg > 1:4354607/1‑150 (MQ=255) gATCTTCATGTTCGAGTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATg < 2:529192/150‑1 (MQ=255) aTCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGa < 2:3321205/150‑1 (MQ=255) aTCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCAC‑AAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGaa > 1:3058280/1‑150 (MQ=255) aTCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGCATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGa < 1:4740876/150‑1 (MQ=255) tCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATAc < 1:2914159/150‑1 (MQ=255) gATTCCTTTCATCGCTTTTCGTTATGCATGAAATATACTCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCt < 2:3368593/150‑1 (MQ=255) gATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGTGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCt > 1:2594831/1‑150 (MQ=255) gATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCt < 2:22799/150‑1 (MQ=255) aTTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCtt < 2:3985630/150‑1 (MQ=255) aTTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATATGCGCTGTGAATGTTTGACAAAAGATGAAATAGAATACCtt > 1:1451279/1‑150 (MQ=255) tCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCtttt > 2:1438910/1‑150 (MQ=255) ccTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTg > 1:914319/1‑150 (MQ=255) gCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGCATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAg < 1:4675893/150‑1 (MQ=255) gCATCGATTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATAATTTTTTATAGATCG‑AATAAAGCCGTAGTTATCTCAAAATTAGGCTTATATTTGCGCTGTGTATGGTTGAATAAAGATTAATTAGAATACCTTTTGTCAg < 2:1986587/150‑1 (MQ=255) cATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGc > 2:1878247/1‑150 (MQ=255) cGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGa < 1:3986017/150‑1 (MQ=255) cTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGaca < 2:2582969/150‑1 (MQ=255) gTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACtt > 2:4456579/1‑150 (MQ=255) gTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCct < 2:4315644/150‑1 (MQ=255) gCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCtcttat < 2:2234856/150‑1 (MQ=255) cATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCtcttatc < 2:5193535/150‑1 (MQ=255) cATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCtcttatc < 1:3480133/150‑1 (MQ=255) aTGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCtcttatct > 2:55727/1‑150 (MQ=255) tGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCtcttatctt > 1:2695066/1‑150 (MQ=255) gAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCtcttatctta > 1:2520822/1‑150 (MQ=255) aaaTCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTcttatcttat < 1:1260924/150‑1 (MQ=255) aTCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTg < 1:2040470/150‑1 (MQ=255) cTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGAt < 1:5263996/150‑1 (MQ=255) cTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGAt < 2:4050652/150‑1 (MQ=255) cTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGAt < 1:2307942/150‑1 (MQ=255) cTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGAt < 1:4655400/150‑1 (MQ=255) tACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATa > 1:1721347/1‑150 (MQ=255) aCGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AGAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATaa > 1:4811169/1‑150 (MQ=255) cAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAAt < 1:962930/150‑1 (MQ=255) aCTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATgg < 2:1313891/150‑1 (MQ=255) tGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACACAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGAt < 2:618110/150‑1 (MQ=255) gAGCTGCTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGAtt < 1:3784801/150‑1 (MQ=255) gAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGTAtt < 1:3181510/150‑1 (MQ=255) gAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGAtt > 1:3407762/1‑150 (MQ=255) gAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGAtt < 1:55727/150‑1 (MQ=255) aGCTACTACCATACAAGTATAAAGATCGAAAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGAtt < 1:3840134/150‑1 (MQ=255) aGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGAttt < 1:3215266/150‑1 (MQ=255) ctactaCCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGATTTAt < 1:4611936/150‑1 (MQ=255) tactacCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCGTCTTATCTTATTGATAAAATGGATTTATg < 2:1636783/150‑1 (MQ=255) actacCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGATTTATGt > 2:1942919/1‑150 (MQ=255) tacCATACAAGTATAAAGATCG‑AAAATAGCCTGAGTGCTCTCAAAAAAAGGCGTATATTTGCGCTGTGTATTGTTGACAAAAGATGAATTAGAATACCTTTTGTCAGCTGACACTTCCTGTTATCTTATTGATAATATGGATTTATGTTc < 2:2416627/150‑1 (MQ=255) acCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGATTTATGTTcc > 2:3566864/1‑150 (MQ=255) cATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGATTTATGTTCCTa < 2:3146465/150‑1 (MQ=255) cATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGATTTATGTTCCTa < 2:2691886/150‑1 (MQ=255) aTACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCAAAAAAAAAGGAGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTATTGACAGCTGACACTTCCTCTTATCTTATAGATAAAAATGATTTATTTTCCTAc > 1:3120921/1‑150 (MQ=255) tataAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGATTTATGTTCCTACGTGCGcc > 2:4161575/1‑150 (MQ=255) tataAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGATTTATGTTCCTACGTGCGcc > 2:45679/1‑150 (MQ=255) | ATACCGTCCTCAGTGGTGATTTTTAATGTGACGAAATTACGCCCCGGACAGGTAACAAAAACTTCAGCCTTTACGATCTTCATGTTCGATTCCTTGCATCGCTTGTCGTGATGCATGAAATCTACGCAACTGAGCTACTACCATACAAGTATAAAGATCG‑AAAAAAGCCGGAGTGATCACAAAAAAAGGCGTATATTTGCGCTGTGAATGGTTGACAAAAGATGAAATAGAATACCTTTTGTCAGCTGACACTTCCTCTTATCTTATTGATAAAATGGATTTATGTTCCTACGTGCGCC > CP009273/1649316‑1649614 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |