| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,669,413 | G→T | 11.2% | P402Q (CCG→CAG) | pntB ← | pyridine nucleotide transhydrogenase, beta subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,669,413 | 0 | G | T | 11.2% | 1043.8 / 63.8 | 312 | P402Q (CCG→CAG) | pntB | pyridine nucleotide transhydrogenase, beta subunit |
| Reads supporting (aligned to +/- strand): ref base G (135/142); new base T (19/16); total (154/158) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.80e-01 | |||||||||||
Only 100 of 319 total aligned reads displayed.
TGGCGTCACCAAACAGCATGTGGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATACGTTCATATGTCCA > CP009273/1669264‑1669562 | cACCAAACAGCATGTGGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGatcat < 2:4370546/150‑1 (MQ=255) cACCAAACAGCATGTGGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGatcat < 1:1303325/150‑1 (MQ=255) cACCAAACAGCATGTGGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGatcat > 1:1865858/1‑150 (MQ=255) cAAACAGCATGTGGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCt < 2:4633554/150‑1 (MQ=255) cAAACAGCATGTGGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCt > 2:3017577/1‑150 (MQ=255) aaaCAGCATGTGGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTg > 1:419799/1‑150 (MQ=255) aaaCAGCATGTGGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTg > 2:2881061/1‑150 (MQ=255) aaCAGCATGTGGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTgc > 1:1116580/1‑150 (MQ=255) aCAGCATGTGGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTgcg < 1:5180406/150‑1 (MQ=255) aCAGCATGTGGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTgcg < 1:4686607/150‑1 (MQ=255) cAGCATGTGGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATTGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCTGATCATCCTgcgc > 1:1827901/1‑150 (MQ=255) cAGCATGTGGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTgcgc < 2:211451/150‑1 (MQ=255) aGCATGTGGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGcgcc < 1:2130142/150‑1 (MQ=255) cATGTGGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGcgccgc < 2:1865182/150‑1 (MQ=255) cATGTGGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGcgccgc > 2:5089288/1‑150 (MQ=255) tgGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCggg > 2:1168275/1‑150 (MQ=255) gtTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCTACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAAc > 1:2983136/1‑150 (MQ=255) ttttCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAAcc > 2:1399807/1‑150 (MQ=255) ttttCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAAcc < 1:4020810/150‑1 (MQ=255) tttCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCg < 2:2602640/150‑1 (MQ=255) ttCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGt < 2:1048137/150‑1 (MQ=255) cTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATc < 2:3300645/150‑1 (MQ=255) aagaaCAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTa > 1:1972435/1‑150 (MQ=255) tgggTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAAt > 1:224851/2‑150 (MQ=255) gggTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATc < 2:3384296/150‑1 (MQ=255) ttttGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCAcc < 1:2300474/150‑1 (MQ=255) gCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTa > 1:1047057/1‑150 (MQ=255) cacaCCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCTGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTAc > 2:4839053/1‑150 (MQ=255) cacaCCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCTGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTAc > 1:2031298/1‑150 (MQ=255) cacaCCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTAc > 2:3958845/1‑150 (MQ=255) acacCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATAGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTCcg < 1:1496412/150‑1 (MQ=255) acCAGCATCGCCAGTGTTCATCGCACGTTTAAAGACACTCACGTTCTGCGCTTGCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTAcggt < 2:753737/150‑1 (MQ=255) acCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTAcggt > 2:3790717/1‑150 (MQ=255) acCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTAcggt < 2:3590825/150‑1 (MQ=255) aGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCTGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTAcggtatc < 1:3392742/150‑1 (MQ=255) aGCATAGCCAGTGTTCATCGAACGATTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCTGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTAcggtatc < 1:4268950/150‑1 (MQ=255) gCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTAcggtatcg < 1:254208/150‑1 (MQ=255) cATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTAcggtatcgg > 1:2282520/1‑150 (MQ=255) aTAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTAcggtatcggt < 2:2379129/150‑1 (MQ=255) tAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCACTCACCAGTAcggtatcggta > 2:3731608/1‑150 (MQ=255) cAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAg < 2:253116/150‑1 (MQ=255) gtTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCaaa < 2:562880/150‑1 (MQ=255) gtTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCaaa > 2:488175/1‑150 (MQ=255) tCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCTGTATCAGCAAAGt > 2:3757428/1‑150 (MQ=255) tCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGt > 2:3121759/1‑150 (MQ=255) cATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGtc < 2:2798471/150‑1 (MQ=255) cATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGtc < 1:2095812/150‑1 (MQ=255) cATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGtc < 1:2938687/150‑1 (MQ=255) aTCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGtca > 1:121262/1‑150 (MQ=255) aTCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGtca > 2:2257954/1‑150 (MQ=255) cGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGtcatc > 2:5266591/1‑150 (MQ=255) gAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGtcatca > 1:14590/1‑150 (MQ=255) aCGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCAtt < 1:784324/150‑1 (MQ=255) gTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCTGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGa < 1:1009483/150‑1 (MQ=255) gTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGa > 1:4147532/1‑150 (MQ=255) tttAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGAt > 1:1089113/1‑150 (MQ=255) tAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGAtct > 2:3431664/1‑150 (MQ=255) tAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGAtct < 2:87565/150‑1 (MQ=255) aGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCTGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGt > 1:2313529/1‑150 (MQ=255) gACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTc > 1:4750090/1‑150 (MQ=255) cAATCACGTTCNGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCa > 1:2764734/1‑150 (MQ=255) cGTTCTGCGCTTTCCACTCGTCCAGCACAGGCATACCAGCAATCGGTCTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTTCGGTATCGGTATCAGCAAAGTCATCATTGATATCGTCCATTTCCa < 1:4061880/150‑1 (MQ=255) gTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAg > 2:4418631/1‑150 (MQ=255) gTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAg < 1:3537944/150‑1 (MQ=255) cTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCTGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCAc > 1:3770997/1‑150 (MQ=255) cTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCAc < 2:224851/150‑1 (MQ=255) gcgcTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGa < 1:857760/150‑1 (MQ=255) tCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCAt < 2:4007760/150‑1 (MQ=255) acacTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCATTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACg < 1:4774856/150‑1 (MQ=255) acacTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACg > 2:664848/1‑150 (MQ=255) acacTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACg < 1:1755760/150‑1 (MQ=255) cacTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACgg > 2:3858480/1‑150 (MQ=255) tCCATCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACt < 1:3903735/150‑1 (MQ=255) tCCAGCACAGGCATACCAGCAATCGGACTCTTCTGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACt < 1:346783/150‑1 (MQ=255) tCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACt < 2:4529168/150‑1 (MQ=255) tCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACt < 1:2883557/150‑1 (MQ=255) tCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACt < 2:1303858/150‑1 (MQ=255) ccAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACtt < 1:5026036/150‑1 (MQ=255) cacaGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGc > 2:2094019/1‑150 (MQ=255) acaGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCt > 1:4833237/1‑150 (MQ=255) cATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTcagc > 2:5206003/1‑150 (MQ=255) aTACCAGCAATCGGACTCTTCTGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTcagcc < 1:2847703/150‑1 (MQ=255) aTACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTcagcc > 2:1657177/1‑150 (MQ=255) aTACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTcagcc > 2:411492/1‑150 (MQ=255) tACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTcagcca > 1:3482950/1‑150 (MQ=255) aCCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTcagccag > 1:3619855/1‑150 (MQ=255) gCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAAt < 1:660455/150‑1 (MQ=255) cAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATATCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATa < 1:1962416/150‑1 (MQ=255) aaTCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATAc < 2:1576680/150‑1 (MQ=255) aaTCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATAc < 1:4507789/150‑1 (MQ=255) aTCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATACg < 2:1805641/150‑1 (MQ=255) aTCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATACg > 2:4755020/1‑150 (MQ=255) gACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATACGTTCa > 1:3084640/1‑150 (MQ=255) aCTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATACGTTCat < 1:5299114/150‑1 (MQ=255) ctctTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATACGTTCata > 2:2724546/1‑150 (MQ=255) tctTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATACGTTCatat < 1:4398996/150‑1 (MQ=255) ctTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATACGTTCATATg < 1:4301941/150‑1 (MQ=255) ctTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATACGTTCATATg < 2:946081/150‑1 (MQ=255) ggATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATACGTTCATATGTCCa > 1:962510/1‑150 (MQ=255) ggATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATACGTTCATATGTCCa < 1:1636016/150‑1 (MQ=255) | TGGCGTCACCAAACAGCATGTGGGTGTTTTCCTTGAAGAACAGCGGGTTTTGCACACCAGCATAGCCAGTGTTCATCGAACGTTTAAAGACAATCACGTTCTGCGCTTTCCACACTTCCAGCACAGGCATACCAGCAATCGGACTCTTCGGATCATCCTGCGCCGCCGGGTTAACCGTATCGTTAGCACCAATCACCAGTACGGTATCGGTATCAGCAAAGTCATCATTGATCTCGTCCATTTCCAGCACGATGTCATACGGTACTTTTGCTTCAGCCAGCAATACGTTCATATGTCCA > CP009273/1669264‑1669562 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |