| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,731,596 | C→A | 32.2% | intergenic (‑49/+117) | ydhP ← / ← ynhF | putative transporter/stress response membrane |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,731,596 | 0 | C | A | 32.2% | 603.9 / 283.6 | 357 | intergenic (‑49/+117) | ydhP/ynhF | putative transporter/stress response membrane |
| Reads supporting (aligned to +/- strand): ref base C (109/133); new base A (46/69); total (155/202) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.24e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.47e-01 | |||||||||||
Only 100 of 361 total aligned reads displayed.
CCGCGCGCAATGACGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCGAGAGGAAATCAGTGCAGCGCGGCAGTCAAACCCACGGCTAC > CP009273/1731447‑1731745 | ccGCGCGCAATGACGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACTCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGc < 2:4181902/150‑1 (MQ=255)ccGCGCGCAATGACGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGc < 1:1428062/150‑1 (MQ=255) cgcgcAATGACGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGaa < 2:232253/150‑1 (MQ=255) cgcgcAATGACGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGaa < 2:232407/150‑1 (MQ=255) cgcgcAATGACGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGaa > 1:1921751/1‑150 (MQ=255) gcgcAATGACGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGaaa < 1:5173862/150‑1 (MQ=255) cgcAATGACGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAg > 1:1026768/1‑150 (MQ=255) aaTGACGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCAt < 2:3815844/150‑1 (MQ=255) aaTGACGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCAt > 1:1250789/1‑150 (MQ=255) aaTGACGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCAt > 2:1528935/1‑150 (MQ=255) aaTGACGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCAt > 1:2782285/1‑150 (MQ=255) gACGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGAc < 2:1122592/150‑1 (MQ=255) gACGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGAc < 2:892592/150‑1 (MQ=255) cGGGCAACACGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAg < 2:5226142/150‑1 (MQ=255) cGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAg > 1:1510966/1‑150 (MQ=255) cGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAg > 1:2966212/1‑150 (MQ=255) gggCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGc > 1:964581/1‑150 (MQ=255) gggCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGc > 2:2613105/1‑150 (MQ=255) gCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCaa > 2:2374797/1‑150 (MQ=255) caacaaGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAAt < 2:563716/150‑1 (MQ=255) aacaaGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATc < 1:1674766/150‑1 (MQ=255) aacaaGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATc < 2:1766231/150‑1 (MQ=255) aacaaGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTATCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATc > 2:3004014/1‑150 (MQ=255) caaGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATcac > 1:1212090/1‑150 (MQ=255) aaGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTTCGCGATATTCATTAAAGTGGCGAAAGCATGACAGCATTcaca < 2:1980127/150‑1 (MQ=255) aaGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATcaca > 1:3219108/1‑150 (MQ=255) aGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACaa < 1:3047173/150‑1 (MQ=255) aGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACaa < 1:847404/150‑1 (MQ=255) cccATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACaaaa < 1:4755086/150‑1 (MQ=255) cccATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACaaaa < 1:4104717/150‑1 (MQ=255) cATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACaaaaaa < 1:2674359/150‑1 (MQ=255) tGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATg < 2:2459477/150‑1 (MQ=255) gCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAAGCACAAAAAAATGaa > 2:4544173/1‑150 (MQ=255) gagaTCTCCGTTGTCCATATACCAAACGCGCCAATCGACAGCTCCAGCAACGTATAGTTTATTTTCATGCCTTATCTACAACTCTTCGCGTCATTACGCTATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGaaaa < 1:2290188/150‑1 (MQ=255) agaACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAAt < 1:3874700/150‑1 (MQ=255) agaACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAAt < 2:4748014/150‑1 (MQ=255) aaCTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATaa < 2:1944548/150‑1 (MQ=255) aaCTCCGTTGTCCAGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCATTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATaa < 2:5258188/150‑1 (MQ=255) aCTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAAc < 1:5294276/150‑1 (MQ=255) cTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACa < 1:919828/150‑1 (MQ=255) cGTTGTCCCGATACAAAACGCGCCAATCGCCAGCGCCAGCAACTGATATTTTATTTTCATTCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACaaaa < 1:4569472/150‑1 (MQ=255) gTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACaaaaa > 1:702727/1‑150 (MQ=255) ttGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGAGTCATTACGCTATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAag < 2:1595279/150‑1 (MQ=255) tGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACACAAaga > 2:2852940/1‑150 (MQ=255) tGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCATATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACaaaaata > 1:289701/1‑148 (MQ=255) tCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAgaga < 1:4822967/150‑1 (MQ=255) cccGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGaa < 1:4681468/150‑1 (MQ=255) gATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAac < 1:4252753/150‑1 (MQ=255) aTACCAAACGCGACAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATTCCTTATCTCCACCTCTTCGCGTCATTACTCGATATTCATTAAAGTGGCGAAAGCATGACAGAAATCACAAAAAAATGAAAATAACAAAACGAGAAAaca < 1:2346494/150‑1 (MQ=255) tACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAacac > 1:401108/1‑150 (MQ=255) ccAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAACAAGAGAAAACACtt < 2:1421021/150‑1 (MQ=255) aaaCGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACtttt < 2:1693476/150‑1 (MQ=255) aaaCGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACtttt > 2:788377/1‑150 (MQ=255) aaCGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTg < 2:5043974/150‑1 (MQ=255) cgcgCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGcc < 1:1140780/150‑1 (MQ=255) gcCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCAtt < 2:1351760/150‑1 (MQ=255) aaTCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTg > 2:3229332/1‑150 (MQ=255) aTCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGc < 2:2131035/150‑1 (MQ=255) tCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCt < 1:2214090/150‑1 (MQ=255) tCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCt < 1:4931103/150‑1 (MQ=255) gccagcgccagcAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTaa < 2:1110735/150‑1 (MQ=255) gccagcgccagcAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTaa < 1:544332/150‑1 (MQ=255) ccagcgccagcAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTaac < 2:2533081/150‑1 (MQ=255) ccagcgccagcAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTaac < 1:3650761/150‑1 (MQ=255) ccagcgccagcAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTaac < 2:1683385/150‑1 (MQ=255) cagcgccagcAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTaaca > 1:1080371/1‑150 (MQ=255) agcgccagcAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTaacaa > 1:4599445/1‑150 (MQ=255) cagcAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACagg < 2:489902/150‑1 (MQ=255) gcAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCCCAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACaggaa < 2:1217810/150‑1 (MQ=255) gcAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACaggaa < 1:3321978/150‑1 (MQ=255) gcAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACaggaa < 2:4308562/150‑1 (MQ=255) cAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACaggaag > 1:1987994/1‑150 (MQ=255) aaCGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACaggaagg < 1:4364081/150‑1 (MQ=255) aaCGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACaggaagg > 1:4034813/1‑150 (MQ=255) aaCGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCAC‑AAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACaggaagga > 1:3728855/1‑150 (MQ=255) gATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGAt < 1:3503772/150‑1 (MQ=255) aTAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATg > 2:3380852/1‑150 (MQ=255) aTAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATg < 2:3775292/150‑1 (MQ=255) aGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCg > 2:3510635/1‑150 (MQ=255) aGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCg > 2:2640134/1‑150 (MQ=255) ttAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAg > 2:3468912/1‑150 (MQ=255) tAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAgg < 1:136747/150‑1 (MQ=255) aTTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAATGAGATGCGAGGga > 1:17696/1‑150 (MQ=255) aTTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGga < 1:2587420/150‑1 (MQ=255) aTTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGga > 2:2700719/1‑150 (MQ=255) cATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAAcg > 1:1827953/1‑150 (MQ=255) tGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAAcgcg > 2:4660982/1‑150 (MQ=255) ccTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCt < 2:3329796/150‑1 (MQ=255) ttATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTcc > 2:3734726/1‑150 (MQ=255) aTCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCt > 1:212012/1‑150 (MQ=255) ctcCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCg > 1:5147675/1‑150 (MQ=255) ctctTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCGAGAGGa > 2:2233844/1‑150 (MQ=255) ttCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCGAGAGGAAAt > 1:585957/1‑150 (MQ=255) tCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCGAGAGGAAATc < 2:1042726/150‑1 (MQ=255) cgcgTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAACAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCGAGAGGAAATCa < 2:3594320/150‑1 (MQ=255) cgATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCGAGAGGAAATCAGTGCAGCGCGGc < 2:4994163/150‑1 (MQ=255) gtCATTACAGTGGCGAAAGCATGACAGCTATCACAATAAAATGATATGAACAACAAGAGAAAACTCTTGTGCCAGTTTGCTTACTAACAGGACGGAGATGCGAGGGAGTACGCGCGCCCTCGAGAGGAAATCAGTGCAGCGCGGCAGTCa < 2:19326/149‑1 (MQ=255) aTTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCGAGAGGAAATCAGTGCAGCGCGGCAGTCAAAc < 1:3399873/150‑1 (MQ=255) aaGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCGAGAGGAAATCAGTGCAGCGCGGCAGTCAAACCCAc < 2:391348/150‑1 (MQ=255) tGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCGAGAGGAAATCAGTGCAGCGCGGCAGTCAAACCCACGGc > 2:692445/1‑150 (MQ=255) | CCGCGCGCAATGACGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCGAGAGGAAATCAGTGCAGCGCGGCAGTCAAACCCACGGCTAC > CP009273/1731447‑1731745 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |