| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,760,702 | G→T | 24.8% | I747I (ATC→ATA) | ydiJ ← | putative FAD‑linked oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,760,702 | 0 | G | T | 24.8% | 692.3 / 170.4 | 303 | I747I (ATC→ATA) | ydiJ | putative FAD‑linked oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base G (109/118); new base T (33/43); total (142/161) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.09e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 306 total aligned reads displayed.
GTAAAGGGGTCCTGCACCACCAACACTGTGCGCGCTTTCTGCTCTGCATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAGGTGGTCGCGCAGCGGGCGTAAATAACGGGTGTGATAGAGCTG > CP009273/1760553‑1760851 | gTAAAGGGGTCCTGCACCACCAACACTGTGCGCGCTTTCTGCTCTGCATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCg > 2:3868995/1‑150 (MQ=255) gggTCCTGCACCACCAACACTGTGCGCGCTTTCTGCTCTGCATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGt < 1:2375052/150‑1 (MQ=255) ggTCCTGCACCACCAACACTGTGCGCGCTTTCTGCTCTGCATTGAGAGATTCAATCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGtt > 1:3936272/1‑150 (MQ=255) gTCCTGCACCACCAACACTGTGCGCGCTTTCTGCTCTGCATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCTATATGttt < 2:2637360/150‑1 (MQ=255) gTCCTGCACCACCAACACTGTGCGCGCTTTCTGCTCTGCATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGttt < 2:2980685/150‑1 (MQ=255) accaccAACACTGTGCGCGCTTTCTGCTCTGCATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCTATATGTTTTTCCgag < 2:2877245/150‑1 (MQ=255) accaccAACACTGTGCGCGCTTTCTGCTCTGCATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCTATATGTTTTTCCgag > 1:2877245/1‑150 (MQ=255) caACACTGTGCGCGCTTTCTGCTCTGCATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGttt < 2:4634923/150‑1 (MQ=255) caACACTGTGCGCGCTTTCTGCTCTGCATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGttt < 1:4255712/150‑1 (MQ=255) acacTGTGCGCGCTTTCTGCTCTGCATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTgc < 1:2259296/150‑1 (MQ=255) cacTGTGCGCGCTTTCTGCTCTGCATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTgcg > 1:5176337/1‑150 (MQ=255) tgtgCGCGCTTTCTGCTCTGCATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCAc > 2:5272019/1‑150 (MQ=255) tgCGCGCTTTCTGCTCTGCATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTgcgc < 2:2660823/146‑1 (MQ=255) tgCGCGCTTTCTGCTCTGCATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCa < 1:1744309/150‑1 (MQ=255) tgCGCGCTTTCTGCTCTGCATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCa < 2:524629/150‑1 (MQ=255) gcTTTCTGCTCTGCATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCTATATGTTTTTCCGAGAGTTTGCGCACCAGCGGc > 1:4060756/1‑150 (MQ=255) tttCTGCTCTGCATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCTATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTg < 2:3593158/150‑1 (MQ=255) ttCTGCTCTGCATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTgg < 1:3351280/150‑1 (MQ=255) tctgctctgcATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGt < 2:3326902/150‑1 (MQ=255) tcagctctgcATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGt < 2:4845614/147‑1 (MQ=255) ctgctctgcATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCTATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGtt < 1:1830355/150‑1 (MQ=255) ctgctctgcATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGTGCACCAGCGGCTGGtt < 1:1435816/150‑1 (MQ=255) gctctgcATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCTATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTaa > 1:3600954/1‑150 (MQ=255) gctctgcATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTaa > 2:5024390/1‑150 (MQ=255) ctctgcATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAAt < 1:1004624/150‑1 (MQ=255) tctgcATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCTATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATg < 1:2822418/150‑1 (MQ=255) tctgcATTGAGAGATTCAAGCTGGTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATTTGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATg < 2:197041/150‑1 (MQ=255) ctgcATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATga > 1:5323815/1‑150 (MQ=255) tgcATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGTGCACCAGCGGCTGGTTAATgaa > 1:1567200/1‑150 (MQ=255) tgcATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGTGCACCAGCGGCTGGTTAATgaa > 1:1262219/1‑150 (MQ=255) gcATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCTATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATgaag < 2:4902222/150‑1 (MQ=255) gcATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATgaag > 1:4742665/1‑150 (MQ=255) cATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCTATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATgaaga < 2:1437271/150‑1 (MQ=255) cATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATgaaga > 1:936738/1‑150 (MQ=255) ttGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGaagaag > 2:2214632/1‑150 (MQ=255) tGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCTATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGt > 2:2472511/1‑150 (MQ=255) gagagaTTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGtt > 1:1615746/1‑150 (MQ=255) gagagaTTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGtt > 1:1136943/1‑150 (MQ=255) agagaTTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCTATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTa < 1:2329375/150‑1 (MQ=255) gagaTTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGTGCACCAGCGGCTGGTTCATGAAGACGTTaa > 2:4049249/1‑150 (MQ=255) gaTTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAg < 2:699824/150‑1 (MQ=255) aTTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCTATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAgg < 2:4387059/150‑1 (MQ=255) aTTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAgg > 2:1108926/1‑150 (MQ=255) aTTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAgg > 2:115009/1‑150 (MQ=255) cAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGttt < 2:3671155/150‑1 (MQ=255) aaGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGtttt < 2:4299745/150‑1 (MQ=255) aaGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGtttt > 2:4723235/1‑150 (MQ=255) aaGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGtttt > 1:1475491/1‑150 (MQ=255) aaGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGtttt < 2:1639895/150‑1 (MQ=255) aGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTc < 1:5222459/150‑1 (MQ=255) aGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTc < 1:2750425/150‑1 (MQ=255) gCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCTATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCg < 2:2812399/150‑1 (MQ=255) gCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCTATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCg < 2:612918/150‑1 (MQ=255) gTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGgcg < 1:2512691/150‑1 (MQ=255) ttCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCTATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTTATGAAGAAGTTAAAGGTTTTCGgcgc < 2:3934353/150‑1 (MQ=255) tacatcGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCTACAGCAGCGGCAAATCAACCATGCCGATATGTATTTCCGAGAGTTTGCGCACCATCGGCTGGTTAATGAAGAAGTTAAAGGTATTAGgcgcg > 2:134561/6‑150 (MQ=255) cATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCTATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCAt < 2:121737/150‑1 (MQ=255) tGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCa < 2:1606880/150‑1 (MQ=255) cGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGgcgc > 1:2726612/1‑150 (MQ=255) cGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCTATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAg > 2:4500794/1‑150 (MQ=255) cGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAg > 2:1301734/1‑150 (MQ=255) gATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGc > 1:1976242/1‑150 (MQ=255) cccACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCg > 2:4164001/1‑150 (MQ=255) ccaccaTTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGa > 2:3517726/1‑150 (MQ=255) ccaTTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCCCCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCg > 1:810603/1‑150 (MQ=255) ccaTTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCg < 1:4365453/150‑1 (MQ=255) caTTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCTATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGt > 2:1851479/1‑150 (MQ=255) tgttgttgtAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGcg < 1:3521256/150‑1 (MQ=255) tgttgttgtAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGcg > 1:2627123/1‑150 (MQ=255) gttgttgtAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCTATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGcga > 1:892297/1‑150 (MQ=255) ttgttgtAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGcgac < 1:3709809/150‑1 (MQ=255) gttgtAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGcgacga > 1:4475413/1‑150 (MQ=255) aGCGAGGGGACCGACAGCAGCGGCAAATCAACCCTGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAggtgg < 2:1387457/150‑1 (MQ=255) aGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCTATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAggtgg > 2:2538263/1‑150 (MQ=255) aGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAGGTGGTcgc < 1:3998013/150‑1 (MQ=255) ggACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAGGTGGTCGCGCa < 1:4850513/150‑1 (MQ=255) aCAGCAGCGGCAAATCAACCATGCCTATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAGGTGGTCGCGCAGCGGGc > 2:874391/1‑150 (MQ=255) aCAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCCTCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAGGTGGTCGCGCAGCGGGc > 2:3451613/1‑150 (MQ=255) agcagcGGCAAATCAACCATGCCTATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAGGTGGTCGCGCAGCGGGCGt < 2:2130262/150‑1 (MQ=255) agcagcGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAGGTGGTCGCGCAGCGGGCGt > 1:210434/1‑150 (MQ=255) agcagcGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAGGTGGTCGCGCAGCGGGCGt < 1:4650370/150‑1 (MQ=255) gcGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAGGTGGTCGCGCAGCGGGCGTAAAt < 1:3495123/150‑1 (MQ=255) gcGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAGGTGGTCGCGCAGCGGGCGTAAAt < 1:3789257/150‑1 (MQ=255) ggCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCTGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAGGTGGTCGCGCAGCGGGCGTAAATaa > 1:2184373/1‑150 (MQ=255) gCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAGGTGGTCGCGCAGCGGGCGTAAATAAc < 1:1245008/150‑1 (MQ=255) gCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAGGTGGTCGCGCAGCGGGCGTAAATAAc > 2:1760604/1‑150 (MQ=255) cAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAGGTGGTCGCGCAGCGGGCGTAAATAACg < 2:3837528/150‑1 (MQ=255) aaaTCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAGGTGGTCGCGCAGCGGGCGTAAATAACgg > 2:940266/1‑150 (MQ=255) aTCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAGGTGGTCGCGCAGCGGGCGTAAATAACGGgt > 1:694536/1‑150 (MQ=255) aTCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAGGTGGTCGCGCAGCGGGCGTAAATAACGGgt < 2:3611344/150‑1 (MQ=255) aTCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAGGTGGTCGCGCAGCGGGCGTAAATAACGGgt > 1:498797/1‑150 (MQ=255) cAACCATGCCGATTTTTTTTACCGAGAGTTTGCGCACCAGCGGCTGGTTATTGAAGATGTTAATGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAGGTGGTCGCGCAGCGGGCGTAAATAACGGgtgt < 1:507809/150‑1 (MQ=255) cAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAGGTGGTCGCGCAGCGGGCGTAAATAACGGgtgt > 2:5161701/1‑150 (MQ=255) aaCCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAGGTGGTCGCGCAGCGGGCGTAAATAACGGGtgtg > 2:2042909/1‑150 (MQ=255) aaCCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAGGTGGTCGCGCAGCGGGCGTAAATAACGGGtgtg < 1:1199901/150‑1 (MQ=255) aTGCCGATATTTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAGGTGGTCGCGCAGCGGGCGTAAATAACGGGTGTGATag < 2:3748750/150‑1 (MQ=255) tGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAGGTGGTCGCGCAGCGGGCGTAAATAACGGGTGTGATaga < 1:3028803/150‑1 (MQ=255) gCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAGGTGGTCGCGCAGCGGGCGTAAATAACGGGTGTGATagag < 2:237959/150‑1 (MQ=255) cGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAGGTGGTCGCGCAGCGGGCGTAAATAACGGGTGTGATAGAGCt < 2:3142597/150‑1 (MQ=255) cGATATGTTTTTCCGAGAGTGTGCGCACCTGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAGGTGGTCGCGCAGCGGGCGTAAATAACGGGTGTGATAGAGCt < 1:3214174/150‑1 (MQ=255) | GTAAAGGGGTCCTGCACCACCAACACTGTGCGCGCTTTCTGCTCTGCATTGAGAGATTCAAGCTGTTCCAGCGTCATGTTTGCCGAGCGATGCCCCACCATTTGTTGTTGTAGCGAGGGGACCGACAGCAGCGGCAAATCAACCATGCCGATATGTTTTTCCGAGAGTTTGCGCACCAGCGGCTGGTTAATGAAGAAGTTAAAGGTTTTCGGCGCGCGTGCCATCAGCGGCGCGTAGCTCTCGACCGTAGCGACGAGGTGGTCGCGCAGCGGGCGTAAATAACGGGTGTGATAGAGCTG > CP009273/1760553‑1760851 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |