| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,812,514 | C→A | 100% | D82Y (GAT→TAT) | chbF ← | phospho‑chitobiase; general 6‑phospho‑beta‑glucosidase activity |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,812,514 | 0 | C | A | 97.1% | 868.0 / 13.1 | 278 | D82Y (GAT→TAT) | chbF | phospho‑chitobiase; general 6‑phospho‑beta‑glucosidase activity |
| Reads supporting (aligned to +/- strand): ref base C (3/5); new base A (145/124); total (148/130) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 278 total aligned reads displayed.
TCAAAAATCACCGGAATGGTACGCAGACCTTTAAACAAACCGCCCGCGCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATCAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAGTTTCGGTTTACCACCTTCGACATCCACCAGCCATAATTCGCTGA > CP009273/1812366‑1812660 | tCAAAAATCACCGGAATGGTACGCAGACCTTTAAACAAACCGCCCGCGCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATCa < 2:1386527/150‑1 (MQ=255) aaaaTCACCGGAATGGTACGCAGACCTTTAAACAAACCGCCCGCGCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCa > 1:4893487/1‑150 (MQ=255) aaTCACCGGAATGGTACGCAGACCTTTAAACAAACCGCCCGCGCCGTTGGTTTCCAGACCAAGATAACCATGAATTAATGGAATACGAACATCCAGTTCACGCGCCGGTAAATGGCCAACGCGCAGTTGGGTAGGAACGAAATAAGCATc > 1:2172795/1‑150 (MQ=255) aTCACCGGAATGGTACGCAGACCTTTAAACAAACCGCCCGCGCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACTCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCt < 1:778807/150‑1 (MQ=255) aTCACCGGAATGGTACGCAGACCTTTAAACAAACCGCCCGCGCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCt < 2:5152871/150‑1 (MQ=255) aTCACCGGAATGGTACGCAGACCTTTAAACAAACCGCCCGCGCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCt > 2:3066882/1‑150 (MQ=255) tCACCGGAATGGTACGCAGAACTTTAAACAAACCGCCCGCGCCGTTGGTTTACTGACCAAGATAAAAATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCtt < 1:2981588/150‑1 (MQ=255) ccGGAATGGTACGCAGACCTTTAAACAAACCGCCCGCGCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCa < 2:2095701/150‑1 (MQ=255) ggAATGGTACGCAGACCTTTAAACAAACCGCCCGCGCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAAt < 2:4634726/150‑1 (MQ=255) ggAATGGTACGCAGACCTTTAAACAAACCGCCCGCGCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAAt < 2:3302409/150‑1 (MQ=255) ggAATGGTACGCAGACCTTTAAACAAACCGCCCGCGCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAAt < 1:2697462/150‑1 (MQ=255) gAATGGTACGCAGACCTTTAAACAAACCGCCCGCGCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATg < 1:1267009/150‑1 (MQ=255) gTACGCAGACCTTTAAACAAACCGCCCGCGCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTcg < 2:82293/150‑1 (MQ=255) cGCAGACCTTTAAACAAACCGCCCGCGCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCgcgg < 2:700930/150‑1 (MQ=255) aGACCTTTAAACAAACCGCCCGCGCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGa > 2:3628113/1‑150 (MQ=255) aGACCTTTAAACAAACCGCCCGCGCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGa > 2:4973022/1‑150 (MQ=255) aCCTTTAAACAAACCGCCCGCGCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATc < 2:4375647/150‑1 (MQ=255) cTTTAAACAAACCGCCCGCGCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCa < 2:2186310/150‑1 (MQ=255) tttAAACAAACCGCCCGCGCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAg < 1:4815320/150‑1 (MQ=255) aacaaacCGCCCGCGCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGtt > 2:1606867/1‑150 (MQ=255) caaacCGCCCGCGCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGtttt < 2:1480776/150‑1 (MQ=255) aaacCGCCCGCGCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTta > 2:398655/1‑150 (MQ=255) aacCGCCCGCGCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTtat > 2:4291232/1‑150 (MQ=255) aacCGCCCGCGCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTtat > 2:3494950/1‑150 (MQ=255) cccgcGCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGc < 2:379041/150‑1 (MQ=255) ccgcGCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCt > 1:665027/1‑150 (MQ=255) cgcgCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCtt < 1:1029792/150‑1 (MQ=255) cgcgCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCtt > 2:5025642/1‑150 (MQ=255) cgcgCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCtt > 2:4078886/1‑150 (MQ=255) tgTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCg > 1:4474666/2‑150 (MQ=255) cGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCg > 2:2603691/1‑150 (MQ=255) cGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCg > 1:3433321/1‑150 (MQ=255) gTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCgg > 1:3939250/1‑150 (MQ=255) gTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGGAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCATTCAATGCTACGCGGCGATCCAGCGTTTTATAAAGCTTCATCgg > 2:615894/1‑150 (MQ=255) ttGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCggg > 2:3578007/1‑150 (MQ=255) ggTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGAc < 2:1101176/150‑1 (MQ=255) gTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACg < 1:245384/150‑1 (MQ=255) tttCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGc > 2:2496845/1‑150 (MQ=255) tttCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGc > 2:180885/1‑150 (MQ=255) ttCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGcc > 1:1839812/1‑150 (MQ=255) ttCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGcc < 2:4414761/150‑1 (MQ=255) cTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGc > 1:3593153/1‑150 (MQ=255) ccAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTa > 2:4916757/1‑150 (MQ=255) cAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGTGTATTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTat < 1:4243885/150‑1 (MQ=255) cAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTat < 2:5299597/150‑1 (MQ=255) aaGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTatc > 1:3685091/1‑150 (MQ=255) aGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTatca > 1:740524/1‑150 (MQ=255) aGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTatca < 2:642377/150‑1 (MQ=255) aGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTatca < 2:308405/150‑1 (MQ=255) aGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTatca > 1:4455512/1‑150 (MQ=255) tAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTatcaatc > 1:1563762/1‑150 (MQ=255) tAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTatcaatc > 1:3230148/1‑150 (MQ=255) aaCCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGATGGGTAGTAACGAAAAAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGATTTATAAAGCTTCATCGGGACGCCAGCGTTatcaatca > 2:2153127/1‑150 (MQ=255) aCCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAatcat < 1:1489589/150‑1 (MQ=255) ccATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAatcatc < 2:2234209/150‑1 (MQ=255) cATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATcc > 1:1770329/1‑150 (MQ=255) cATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATcc < 1:50031/150‑1 (MQ=255) aCTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTg > 2:1847092/1‑150 (MQ=255) aCTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTg < 2:2686064/150‑1 (MQ=255) tAATGGAAGACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCa < 2:1673925/150‑1 (MQ=255) aaTGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCag > 1:2800807/1‑150 (MQ=255) ggAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAgaga < 1:2068147/150‑1 (MQ=255) ggAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAgaga < 1:5166410/150‑1 (MQ=255) gAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGAt < 1:3795991/150‑1 (MQ=255) gAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGAt > 2:3208274/1‑150 (MQ=255) aaTACGTTCAACCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATc < 2:2195087/150‑1 (MQ=255) gTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGaaaa > 1:3537362/1‑150 (MQ=255) aTCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAaataat > 2:4283101/1‑150 (MQ=255) aTCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAaataat > 1:5274556/1‑150 (MQ=255) aTCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAaataat > 2:5116354/1‑150 (MQ=255) ccAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAatat < 2:3408284/150‑1 (MQ=255) cAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATc < 1:4698439/150‑1 (MQ=255) aGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATcc > 2:3747305/1‑150 (MQ=255) ttCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAg < 2:730764/150‑1 (MQ=255) tCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAGt < 2:458328/150‑1 (MQ=255) aCGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAGttt < 1:5139159/150‑1 (MQ=255) gcgcCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAGTTTCg > 2:2060234/1‑150 (MQ=255) cGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAGTTTCGGttt > 2:135663/1‑150 (MQ=255) ggTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAGTTTCGGTTTa > 2:4168572/1‑150 (MQ=255) ggTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAGTTTCGGTTTa > 1:4620338/1‑150 (MQ=255) gTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAGTTTCGGTTTac > 2:712790/1‑150 (MQ=255) aTTGGCCCACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCAGCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAGTTTCGGTTTaccac > 2:4814927/1‑150 (MQ=255) ggCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAGTTTCGGTTTACCACCtt < 1:3992720/150‑1 (MQ=255) gCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAGTTTCGGTTTACCACCTTc < 2:1047203/150‑1 (MQ=255) gCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAGTTTCGGTTTACCACCTTc < 2:1449777/150‑1 (MQ=255) gCCAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAGTTTCGGTTTACCACCTTc < 2:4730048/150‑1 (MQ=255) ccAACGCGCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAGTTTCGGTTTACCACCTTCg < 1:521918/150‑1 (MQ=255) cgcgCAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAGTTTCGGTTTACCACCTTCGACAt > 2:2367364/1‑150 (MQ=255) cgcAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAGTTTCGGTTTACCACCTTCGACATcc < 1:648525/150‑1 (MQ=255) cAGTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAGTTTCGGTTTACCACCTTCGACATccac < 2:4873161/150‑1 (MQ=255) gTTGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAGTTTCTGTTTACCACCTTCGACATccacca > 2:2774690/1‑150 (MQ=255) ttGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAGTTTCGGATTACCACCTTCGACATCCACCAg > 2:4039119/1‑150 (MQ=255) tGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAGTTTCGGTTTACCACCTTCGACATCCACCAGc > 1:143190/1‑150 (MQ=255) tGGGTAGTAACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAGTTTCGGTTTACCACCTTCGACATCCACCAGc > 2:117035/1‑150 (MQ=255) agtaACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAGTTTCGGTTTACCACCTTCGACATCCACCAGCCATac > 2:3907156/1‑149 (MQ=255) gtaACGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAGTTTCGGTTTACCACCTTCGACATCCACCAGCCATAAt < 1:1815452/150‑1 (MQ=255) aaCGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAGTTTCGGTTTACCACCTTCGACATCCACCAGCCATAATTc > 1:169847/1‑150 (MQ=255) cGAAATAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAGTTTCGGTTTACCACCTTCGACATCCACCAGCCATAATTCGc > 2:2715151/1‑150 (MQ=255) aaaTAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAGTTTCGGTTTACCACCTTCGACATCCACCAGCCATAATTCTCTg > 1:201246/1‑150 (MQ=255) aaTAAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAGTTTCGGTTTACCACCTTCGACATCCACCAGCCATAATTCGCTGa > 2:810159/1‑150 (MQ=255) | TCAAAAATCACCGGAATGGTACGCAGACCTTTAAACAAACCGCCCGCGCCGTTGGTTTCCTGACCAAGATAACCATGACTTAATGGAATACGTTCATCCAGTTCACGCGCCGGTAATTGGCCAACGCGCAGTTGGGTAGTAACGAAATCAGCATCTTTCAATGCTTCGCGGCGATCCAGCGTTTTATAAAGCTTCATCGGGACGCCAGCGTTATCAATCATCCGTTGGCAGAGATCGAAAATAATATCCAGTTTCGGTTTACCACCTTCGACATCCACCAGCCATAATTCGCTGA > CP009273/1812366‑1812660 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |