| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,852,274 | C→A | 100% | D273Y (GAT→TAT) | ydjJ ← | putative Zn‑dependent NAD(P)‑binding oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,852,274 | 0 | C | A | 99.4% | 1103.6 / ‑2.6 | 339 | D273Y (GAT→TAT) | ydjJ | putative Zn‑dependent NAD(P)‑binding oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base A (167/170); total (168/171) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 339 total aligned reads displayed.
GATAATCGTAAATATGCGTCACCATCGATTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGCCCATGTCTTCGGTAAATTGCTGACAGCGTGCAATAGTGT > CP009273/1852127‑1852420 | gATAATCGTAAATATGCGTCACCATCGATTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGc > 1:5000706/1‑150 (MQ=255) aaTCGTAAATATGCGTCACCATCGATTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCgg > 2:3213490/1‑150 (MQ=255) gTAAATATGCGTCACCATCGATTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTAc > 2:3031765/1‑150 (MQ=255) aaaTATGCGTCACCATCGATTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAg > 2:1800995/1‑150 (MQ=255) aaaTATGCGTCACCATCGATTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAg < 1:1327334/150‑1 (MQ=255) aaTATGCGTCACCATCGATTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGt < 2:1642650/150‑1 (MQ=255) atatGCGTCACCATCGATTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTa > 1:2201056/1‑150 (MQ=255) atatGCGTCACCATCGATTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTa > 2:5147835/1‑150 (MQ=255) atatGCGTCACCATCGATTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACGTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTa > 2:4524146/1‑150 (MQ=255) tatGCGTCACCATCGATTTCACATCGAATCGCCCTGAATAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTAc > 1:346877/1‑150 (MQ=255) gCGTCACCATCGATTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATTACGATTGGCATAGCGGTATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACcaa < 1:3603716/150‑1 (MQ=255) gCGTCACCATCGATTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACcaa < 1:2453027/150‑1 (MQ=255) cACCATCGATTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAAt < 1:54/150‑1 (MQ=255) aCCATCGATTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATc > 2:61332/1‑150 (MQ=255) ccATCGATTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCa < 1:2582180/150‑1 (MQ=255) cATCGATTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCAt < 1:3829332/150‑1 (MQ=255) cATCGATTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCAt < 1:5278418/150‑1 (MQ=255) cATCGATTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCAt > 1:2876007/1‑150 (MQ=255) cATCGATTTCACATCGAAACGCCCTGAATAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCTCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCAt > 1:3951769/1‑150 (MQ=255) aTCGATTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATa > 2:1174412/1‑150 (MQ=255) cGATTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAAt < 2:5297855/150‑1 (MQ=255) cGATTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAAt < 1:1541154/150‑1 (MQ=255) gATTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAAtt < 1:1178247/150‑1 (MQ=255) gATTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAAtt > 1:123656/1‑150 (MQ=255) tttCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAAtttt < 1:4803572/150‑1 (MQ=255) aTCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTAccgcc > 2:65668/1‑150 (MQ=255) gAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCcgcg > 2:359958/1‑150 (MQ=255) aTCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCa > 1:4819108/1‑150 (MQ=255) cGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCAtt < 2:2480008/150‑1 (MQ=255) gCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTa < 1:5062930/150‑1 (MQ=255) ccTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTAcc > 2:1121123/1‑150 (MQ=255) ccTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTAcc > 1:3523678/1‑150 (MQ=255) ccTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTAcc > 2:4807256/1‑150 (MQ=255) gaataaATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGa > 2:2374158/1‑150 (MQ=255) aagaaATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGAt > 1:881329/1‑150 (MQ=255) aaTAGCTTCAATCGTGACCTGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAgg < 1:2129072/150‑1 (MQ=255) tAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTg > 1:1753119/1‑150 (MQ=255) gCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGcc > 2:5246373/1‑150 (MQ=255) cTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCt < 2:840380/150‑1 (MQ=255) aaTCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTTACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGttt < 2:1983282/150‑1 (MQ=255) cGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAAc > 1:4413873/1‑150 (MQ=255) cGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAAc < 2:2113314/150‑1 (MQ=255) cGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAAc < 2:4159162/150‑1 (MQ=255) tGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACgg > 1:5255873/1‑150 (MQ=255) gACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGt > 1:4514553/1‑150 (MQ=255) ccGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGa < 2:3448392/150‑1 (MQ=255) ccGGATAACGATTGGCAGAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGa < 2:2911865/150‑1 (MQ=255) cGGATTACGTTTGGCATAGCGGAATAGCGTGTGGATAGTGACTTCGCGATTGATTTTGTGGAAATTGTTTGCCGAATAGCCGGGTACAGTACCAACAATCTTAATTTTACCGCCGCGCATTTCCAGTTAAGGTGCCTGTTTTACGGTGAc < 2:4469797/150‑1 (MQ=255) aaCGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAg < 2:2623904/150‑1 (MQ=255) aaCGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAg < 1:1391522/150‑1 (MQ=255) aCGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGa < 1:612547/150‑1 (MQ=255) aTTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAAcc > 1:1051782/1‑150 (MQ=255) aTTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAAcc > 2:4288936/1‑150 (MQ=255) ttGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAAccc < 2:2850997/150‑1 (MQ=255) cATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTg > 1:1928449/1‑150 (MQ=255) cATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTg > 2:4624490/1‑150 (MQ=255) tAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGtt < 2:362771/150‑1 (MQ=255) aGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGttt < 2:2789203/150‑1 (MQ=255) aGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGttt > 2:4358716/1‑150 (MQ=255) aGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGttt > 2:5229629/1‑150 (MQ=255) aGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGttt < 1:4371328/150‑1 (MQ=255) cGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCg < 2:1808856/150‑1 (MQ=255) cGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCg < 2:3415710/150‑1 (MQ=255) cGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCg > 1:4255622/1‑150 (MQ=255) gAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATATGGTGACTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGaa < 2:3567794/150‑1 (MQ=255) aCCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACa > 2:3763437/1‑150 (MQ=255) cGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAat < 1:2525584/150‑1 (MQ=255) tCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAatat < 1:3213490/150‑1 (MQ=255) tCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAatat < 1:2359082/150‑1 (MQ=255) ggATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTg < 2:1490326/150‑1 (MQ=255) atatTGAATTCGCGATTGATTTTGATTAAATTTATTGACGAATAGACGGTTAAATTACCAACAATCATAATTTTACCGCCGAGAATTAACAGATAAGGTGCAATTTTAACGGTGACCTCAGAAACAGCTGTTTCGAAAACAATATCTgcg > 2:4848405/1‑150 (MQ=255) aTAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTgcg < 1:2648681/150‑1 (MQ=255) tAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTgcgc > 1:3067333/1‑150 (MQ=255) aGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGcc > 2:1382159/1‑150 (MQ=255) tGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGCCCa > 1:2271352/1‑150 (MQ=255) tGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGCCCa > 1:1661993/1‑150 (MQ=255) aCTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGCCCATg < 2:3821931/150‑1 (MQ=255) gcgATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGCCCATGTCTTc < 1:3031765/150‑1 (MQ=255) gcgATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGCCCATGTCTTc < 1:1839821/150‑1 (MQ=255) cgATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGCCCATGTCTTct > 1:971076/1‑149 (MQ=255) cgATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGCCCATGTCTTCg < 1:3680165/150‑1 (MQ=255) cgATTGATTTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGCCCATGTCTTCg > 1:4195655/1‑150 (MQ=255) attgattTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGCCCATGTCTTCGGt < 2:440164/150‑1 (MQ=255) attTTGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGCCCATGTCTTCGGTAAAt < 2:3788484/150‑1 (MQ=255) ttttGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGCCCATGTCTTCGGTAAAtt < 1:1800995/150‑1 (MQ=255) ttttGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGCCCATGTCTTCGGTAAAtt < 2:3274770/150‑1 (MQ=255) tttGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGCCCATGTCTTCGGTAAATTg > 1:567434/1‑150 (MQ=255) tGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGCCCATGTCTTCGGTAAATTGCt < 2:2251255/150‑1 (MQ=255) tGAGGAAATTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGCCCATGTCTTCGGTAAATTGCt < 1:1747480/150‑1 (MQ=255) aaaTTGATTGCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGCCCATGTCTTCGGTAAATTGCTGACAg > 1:4672813/1‑150 (MQ=255) attgattgCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGCCCATGTCTTCGGTAAATTGCTGACAGCg > 1:2931672/1‑150 (MQ=255) tgattgCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGAGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGCCCATGTCTTCGGTAAATTGCTGACAGCGTg > 2:4758205/1‑150 (MQ=255) tgCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGCCCATGTCTTCGGTTAATTGCTGACAGCGTGCAAt < 1:818825/150‑1 (MQ=255) tgCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGCCCATGTCTTCGGTAAATTGCTGACAGCGTGCAAt < 2:2991346/150‑1 (MQ=255) gCCGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGCCCATGTCTTCGGTAAATTGCTGACAGCGTGCAATa > 2:2961787/1‑150 (MQ=255) ccGAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGCCCATGTCTTCGGTAAATTGCTGACAGCGTGCAATAg > 2:1134390/1‑150 (MQ=255) gAATAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGCCCATGTCTTCGGTAAATTGCTGACAGCGTGCAATAgtg < 1:1715673/150‑1 (MQ=255) aaTAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGCCCATGTCTTCGGTAAATTGCTGACAGCGTGCAATAgtgt > 1:3864203/1‑150 (MQ=255) aaTAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGCCCATGTCTTCGGTAAATTGCTGACAGCGTGCAATAgtgt > 1:411692/1‑150 (MQ=255) aaTAGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGCCCATGTCTTCGGTAAATTGCTGACAGCGTGCAATAgtgt > 2:2037970/1‑150 (MQ=255) | GATAATCGTAAATATGCGTCACCATCGATTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTGCGCCCATGTCTTCGGTAAATTGCTGACAGCGTGCAATAGTGT > CP009273/1852127‑1852420 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |