| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,874,924 | T→A | 100% | V31V (GTA→GTT) | leuE ← | leucine efflux protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,874,924 | 0 | T | A | 99.4% | 1015.4 / ‑3.4 | 308 | V31V (GTA→GTT) | leuE | leucine efflux protein |
| Reads supporting (aligned to +/- strand): ref base T (0/2); new base A (142/164); total (142/166) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 311 total aligned reads displayed.
ACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGTACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTATCTTTCGATCATGCGCGATTAAAGGTGAATATGCTAA > CP009273/1874777‑1875070 | cGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACa > 1:975484/1‑150 (MQ=255) aTGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAgg > 1:2539656/1‑150 (MQ=255) gTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGt > 2:1671631/1‑150 (MQ=255) tGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTAt > 2:304030/1‑150 (MQ=255) tGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTAt < 2:2778843/150‑1 (MQ=255) gAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTAtt < 1:1923900/150‑1 (MQ=255) aataatATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTCCTGACGCTATTTTTGAGAACAAACAGGGTAttt > 2:4483373/1‑150 (MQ=255) aataatATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTAttt < 1:146959/150‑1 (MQ=255) gtaataTCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATACATGCACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTCGGTTTGAGACCAAACTGGGTAtgtg > 1:4772835/2‑150 (MQ=255) ataataTCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTg > 2:1137979/1‑150 (MQ=255) taataTCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTgg < 2:1629582/150‑1 (MQ=255) atatCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGcc > 1:5224136/1‑150 (MQ=255) tatCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATAGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGccc > 2:2608691/1‑150 (MQ=255) tCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTg > 2:13695/1‑150 (MQ=255) tCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTg < 1:4435897/150‑1 (MQ=255) ggggTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGc > 1:5180393/1‑150 (MQ=255) ggtCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCaa > 2:2727236/1‑150 (MQ=255) gtCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAac > 2:4864888/1‑150 (MQ=255) tCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAaca < 2:658793/150‑1 (MQ=255) cTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAacac > 1:1241609/1‑150 (MQ=255) taattaatGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACaa > 2:3639235/1‑150 (MQ=255) aattaatGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAAt < 1:1671631/150‑1 (MQ=255) aattaatGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAAt < 2:5059484/150‑1 (MQ=255) aattaatGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAAt > 1:676971/1‑150 (MQ=255) aattaatGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAAt < 2:4195697/150‑1 (MQ=255) attaatGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATa > 2:3227568/1‑150 (MQ=255) ttaatGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACCCCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGATATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATaa < 2:4791466/150‑1 (MQ=255) aatGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATaaaa > 2:3620397/1‑150 (MQ=255) tGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAAt > 1:2137171/1‑150 (MQ=255) cACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGcccc > 1:3513287/1‑150 (MQ=255) aCTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCa < 1:2202535/150‑1 (MQ=255) aCTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCa < 1:2806163/150‑1 (MQ=255) tCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGAAGGCCGAAAGATAACCGCCTTTCATTCCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACAAACACAATAAAAATGGCCCCAAc < 1:1378835/150‑1 (MQ=255) ccAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGGATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAAcc > 2:2331872/1‑150 (MQ=255) cAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCa < 2:4438582/150‑1 (MQ=255) cAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCa > 2:4893769/1‑150 (MQ=255) cAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCa > 2:2676744/1‑150 (MQ=255) aGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAg > 2:3922171/1‑150 (MQ=255) aGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAg > 2:3873580/1‑150 (MQ=255) cccATGCCAGAAACATCAATACCGCATCGCCAATCAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACACTAAAAATGGCCCCAACCAGAt > 2:5288166/1‑150 (MQ=255) ccATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATa < 2:3701476/150‑1 (MQ=255) aGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAg > 2:2060395/1‑150 (MQ=255) tCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCa > 1:3296274/1‑150 (MQ=255) cAATACCGCATCGCCAATAACTACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAg < 2:51320/150‑1 (MQ=255) aaTACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGa < 2:1713709/150‑1 (MQ=255) ccGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAAccc < 2:1021586/150‑1 (MQ=255) cGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACTCTATTTTTGAGAACTAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCATCCAGATAGGTCCAGTAATTCAGAAcccc < 2:4625660/150‑1 (MQ=255) cGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGGATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAAcccc < 1:2331872/150‑1 (MQ=255) cATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGt > 1:3319241/1‑150 (MQ=255) aTCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTa > 1:140333/1‑150 (MQ=255) aTCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTa < 1:2833276/150‑1 (MQ=255) cGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTTATTCAGAACCCCGTAtt < 1:4054335/150‑1 (MQ=255) gCCAATAACTACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTc < 2:3554866/150‑1 (MQ=255) ccAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCa > 1:4201275/1‑150 (MQ=255) cAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAg > 1:16055/1‑150 (MQ=255) ataaataCACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCg > 2:5303336/1‑150 (MQ=255) ataCACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAaca < 1:1974838/150‑1 (MQ=255) ataCACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAaca < 1:2646450/150‑1 (MQ=255) acCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACAtt < 2:3348774/150‑1 (MQ=255) acCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACAtt > 2:1212563/1‑150 (MQ=255) gCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACTCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAAc < 2:2159524/150‑1 (MQ=255) gCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAAc < 1:871931/150‑1 (MQ=255) gCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAAc < 1:1957934/150‑1 (MQ=255) ggCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACctc > 1:3859756/1‑150 (MQ=255) gCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACctct < 1:1151800/150‑1 (MQ=255) cGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCttt > 1:1423937/1‑150 (MQ=255) gCAAGATAACCGCCTTTCATACCTCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTa < 1:3749598/150‑1 (MQ=255) gCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTa > 1:4848364/1‑150 (MQ=255) cAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTaa < 2:5182421/150‑1 (MQ=255) aaGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAAt > 2:2862696/1‑150 (MQ=255) aGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAAtt < 2:5002175/150‑1 (MQ=255) gATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTa < 1:3654977/150‑1 (MQ=255) aCCGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTATCtt < 1:2965605/150‑1 (MQ=255) cGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTATCTTTc < 2:2094911/150‑1 (MQ=255) cGCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTATCTTTc < 2:538961/150‑1 (MQ=255) gCCTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTATCTTTCg < 1:1005415/150‑1 (MQ=255) ccTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTATCTTTCGa > 2:1456462/1‑150 (MQ=255) cTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTATCTTTCGAt < 1:640008/150‑1 (MQ=255) cTTTCATACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTATCTTTCGAt < 1:2372721/150‑1 (MQ=255) aTACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTATCTTTCGATCATgc < 2:2539656/150‑1 (MQ=255) aTACCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTATCTTTCGATCATgc < 1:50966/150‑1 (MQ=255) aCCGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTATCTTTCGATCATgcgc > 2:961512/1‑150 (MQ=255) ccGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTATCTTTCGATCATGcgcg < 2:1338290/150‑1 (MQ=255) cGCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTATAATTATCTTTCGATCATGCGCGa > 1:3236111/1‑150 (MQ=255) gCTACTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTATCTTTCGATCATGCGCGAt < 2:2353403/150‑1 (MQ=255) cTGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTATCTTTCGATCATGCGCGATTaaa < 2:559706/150‑1 (MQ=255) tGACGCTATTTTTGAGTACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTATCTTTCGATCATGCGCGATTAAAg < 2:853802/150‑1 (MQ=255) tGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTATCTTTCGATCATGCGCGATTAAAg < 1:113529/150‑1 (MQ=255) tGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTATCTTTCGATCATGCGCGATTAAAg > 1:4717757/1‑150 (MQ=255) tGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTATCTTTCGATCATGCGCGATTAAAg < 2:1987905/150‑1 (MQ=255) tGACGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTATCTTTCGATCATGCGCGATTAAAg < 2:2897120/150‑1 (MQ=255) gaagCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTGTAATTATCTTTCGATCATGCGCGATTAAAgg > 2:1880588/4‑150 (MQ=255) cGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATACAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTATCTTTCGATCATGCGCGATTAAAGGTg < 2:3783981/150‑1 (MQ=255) cGCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTATCTTTCGATCATGCGCGATTAAAGGTg < 1:5328901/150‑1 (MQ=255) gCTATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTATCTTTCGATCATGCGCGATTAAAGGTGa < 2:3445690/150‑1 (MQ=255) tATTTTTGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTATCTTTCGATCATGCGCGATTAAAGGTGAat > 2:3369348/1‑150 (MQ=255) ttttGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTATCTTTCGATCATGCGCGATTAAAGGTGAATATg < 1:3579605/150‑1 (MQ=255) tttGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTATCTTTCGATCATGCGCGATTAAAGGTGAATATGc > 2:409088/1‑150 (MQ=255) ttGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTATCTTTCGATCATGCGCGATTAAAGGTGACTATGCt > 2:4362369/1‑150 (MQ=255) ttGAGAACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTATCTTTCGATCATGCGCGATTAAAGGTGAATATGCt < 1:4163798/150‑1 (MQ=255) | ACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACCGCCTTTCATACCGCTACTGACGCTATTTTTGAGTACAAACAGGGTATTTGGCCCTGGCACCAACACAATAAAAATGGCCCCAACCAGATAGGTCCAGTAATTCAGAACCCCGTATTCAGCGAACACATTAACCTCTTTAATTATCTTTCGATCATGCGCGATTAAAGGTGAATATGCTAA > CP009273/1874777‑1875070 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |