| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,963,622 | A→T | 19.7% | intergenic (‑1/+18) | cheR ← / ← tap | chemotaxis regulator, protein‑glutamate methyltransferase/methyl‑accepting protein IV |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,963,622 | 0 | A | T | 19.7% | 755.5 / 169.5 | 324 | intergenic (‑1/+18) | cheR/tap | chemotaxis regulator, protein‑glutamate methyltransferase/methyl‑accepting protein IV |
| Reads supporting (aligned to +/- strand): ref base A (127/132); new base T (27/37); total (155/169) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.33e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 327 total aligned reads displayed.
ACCATGTCGCGTTTATGGTCAGCCAGAACGATCCCGGCTCGTTGATAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGC > CP009273/1963473‑1963771 | aCCATGTCGCGTTTATGGTCAGCCAGAACGATCCCGGCTCGTTGATAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATa < 2:3272787/150‑1 (MQ=255) cATGTCGCGTTTATGGTCAGCCAGAACGATCCCGGCTCGTTGATAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATTgc < 2:2278999/150‑1 (MQ=255) aTGTCGCGTTTATGGTCAGCCAGAACGATCCCGGCTCGTTGATAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTACCAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAgcg < 2:1797115/150‑1 (MQ=255) gTCGCGTTTATGGTCAGCCAGAACGATCCCGGCTCGTTGATAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGcc < 1:1640137/150‑1 (MQ=255) cgTTTATGGTCAGCCAGAACGATCCCGGCTCGTTGATAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTtct > 2:1327388/1‑150 (MQ=255) gTTTATGGTCAGCCAGAACGATCCCGGCTCGTTGATAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATTGCGCCTtctc < 2:3640442/150‑1 (MQ=255) gTTTATGGTCAGCCAGAACGATCCCGGCTCGTTGATAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTtctc < 2:3752181/150‑1 (MQ=255) tttATGGTCAGCCAGAACGATCCCGGCTCGTTGATAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCa > 1:938710/1‑150 (MQ=255) tGGTCAGCCAGAACGATCCCGGCTCGTTGATAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCa < 2:5229414/150‑1 (MQ=255) cAGCCAGAACGATCCCGGCTCGTTGATAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTc < 1:4055082/150‑1 (MQ=255) aGCCAGAACGATCCCGGCTCGTTGATAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCa < 1:4724880/150‑1 (MQ=255) aGCCAGAACGATCCCGGCTCGTTGATAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCa > 2:687063/1‑150 (MQ=255) gCCAGAACGATCCCGGCTCGTTGATAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAg < 2:4864084/150‑1 (MQ=255) aGAACGATCCCGGCTCGTTGATAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGAt > 2:4155484/1‑150 (MQ=255) cGATCCCGGCTCGTTGATAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCa < 2:2191271/150‑1 (MQ=255) gATCCCGGCTCGTTGATAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATTGCGCCTTCTCAATCACTTCAGGATACCAc > 1:4431751/1‑150 (MQ=255) gATCCCGGCTCGTTGATAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCAc > 2:3166934/1‑150 (MQ=255) gATCCCGGCTCGTTGATAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCAc > 2:285839/1‑150 (MQ=255) aTCCCGGCTCGTTGATAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACt > 1:2428232/1‑150 (MQ=255) gCTCGTTGATAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCa > 1:56444/1‑150 (MQ=255) cGTTGATAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAAtt > 1:543477/1‑150 (MQ=255) cGTTGATAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAAtt > 1:1672910/1‑150 (MQ=255) ttGATAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATTGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTg < 1:4010267/150‑1 (MQ=255) tGATAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGt < 1:3891751/150‑1 (MQ=255) gATAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTa > 1:5109412/1‑150 (MQ=255) aTAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATTGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTaa > 1:1859787/1‑150 (MQ=255) aTAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCACTTTGTaa > 2:4541004/1‑150 (MQ=255) aTAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTaa > 2:459167/1‑150 (MQ=255) aTAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTaa > 2:469198/1‑150 (MQ=255) tAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAAc < 1:3786095/150‑1 (MQ=255) gATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTg < 2:2729934/150‑1 (MQ=255) cAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCAc > 1:4160368/1‑150 (MQ=255) aaTTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCAcc < 2:5045612/150‑1 (MQ=255) aTTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCg > 2:1643714/1‑150 (MQ=255) gACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACt > 2:4518235/1‑150 (MQ=255) ttATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCAt < 2:1439359/150‑1 (MQ=255) ttATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCAt < 2:2941951/150‑1 (MQ=255) tATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATTGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATg > 1:2316262/1‑150 (MQ=255) aTCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGt > 2:2211695/1‑150 (MQ=255) tCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTc > 1:1161873/1‑150 (MQ=255) tCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTc < 1:2216582/150‑1 (MQ=255) ccgccgAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCg < 1:3474500/150‑1 (MQ=255) cgccgAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGt < 2:2508172/150‑1 (MQ=255) cgAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATCGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCt > 2:1983168/1‑150 (MQ=255) gAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTa < 1:1197497/150‑1 (MQ=255) gcgcGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCAt < 1:2551467/150‑1 (MQ=255) cGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGttctt < 2:56232/150‑1 (MQ=255) cGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGttctt > 1:3041778/1‑150 (MQ=255) cGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGttctt < 2:3798606/150‑1 (MQ=255) ggAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATTGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGttcttc < 2:802152/150‑1 (MQ=255) ggAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGttcttc < 2:4976136/150‑1 (MQ=255) gcCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATTGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTa > 1:4134778/1‑150 (MQ=255) gcCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTa > 1:130560/1‑150 (MQ=255) ccAGGCGCTCTGTCATCTGTAACAATAAAGACGTTTTCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCAATGGCGCAATTTGTAACTGCACCGACTCATGTAGTGCTACTTCATGTTCTTCAAGGGTaa > 2:341892/1‑150 (MQ=255) cgcTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATTGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATAcc < 1:3396155/150‑1 (MQ=255) tCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATTGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGcc < 1:1756667/150‑1 (MQ=255) tCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGcc < 1:1531272/150‑1 (MQ=255) ggTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATTGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCcac > 1:2652177/1‑150 (MQ=255) ggTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATTGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCcac < 2:60262/150‑1 (MQ=255) gTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCcaca < 1:4828410/150‑1 (MQ=255) tCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCacac > 2:90173/1‑150 (MQ=255) aTCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACAcgc > 2:1264591/1‑150 (MQ=255) aTCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACAcgc < 1:5216151/150‑1 (MQ=255) cTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGcga > 2:3005621/1‑150 (MQ=255) tGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGcgac > 2:966295/1‑150 (MQ=255) tAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGcgacga > 2:2294113/1‑150 (MQ=255) aCAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATTGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGaaa > 1:3264118/1‑150 (MQ=255) cAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAg < 1:1008453/150‑1 (MQ=255) aTAAAGTCGTTTGCCCACCGGGCAGAGCTGTAGTCATAGCGCCTTCACAATCACTTCAGGTTACCACTGGCGCAATTTGTAACTGCACCGACACATGTCGTGCTACTTCATGTTCATCAACGGTAAATACCGCCACACGCGACGAAAGAt < 2:4449474/150‑1 (MQ=255) aTAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGAt < 1:428148/150‑1 (MQ=255) aTAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGAt > 2:838733/1‑150 (MQ=255) tAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATTGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATg < 2:13819/150‑1 (MQ=255) tAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCACCACACGCGACGAAAGATg < 2:2096286/150‑1 (MQ=255) aaGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGt < 1:4861808/150‑1 (MQ=255) aGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTTATGTTCTTCAAGGGTAAATACCGCCACACGCGACTAAAGATGGTc < 2:1685113/150‑1 (MQ=255) aCGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCgg < 2:2668377/150‑1 (MQ=255) gTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGcc > 1:2782195/1‑150 (MQ=255) gTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGcc > 1:730596/1‑150 (MQ=255) tttGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCt < 2:3468476/150‑1 (MQ=255) tttGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCt < 1:3081603/150‑1 (MQ=255) cccACAGGGCAGAGATGAAGTCATTGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGAtt < 2:2395507/150‑1 (MQ=255) cacaGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCg > 2:1876519/1‑150 (MQ=255) gggCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAg < 1:3655124/150‑1 (MQ=255) ggCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAgt < 2:938710/150‑1 (MQ=255) gCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAgtt < 1:2105234/150‑1 (MQ=255) cAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAgttg < 1:859575/150‑1 (MQ=255) cAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAgttg < 2:4363191/150‑1 (MQ=255) agagATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAgttgt > 1:4485456/1‑150 (MQ=255) agagATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAgttgt > 2:1119401/1‑150 (MQ=255) agagATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAgttgt > 2:2978135/1‑150 (MQ=255) gagaTGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAgttgtt > 2:361044/1‑150 (MQ=255) agaTGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTc < 2:2111122/150‑1 (MQ=255) aTGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCg > 1:984254/1‑150 (MQ=255) gAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGtt < 2:2750306/150‑1 (MQ=255) gAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGtt > 2:5258462/1‑150 (MQ=255) aaGTCATTGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTg < 1:4636237/150‑1 (MQ=255) aaGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTg > 1:3621598/1‑150 (MQ=255) tCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCa > 2:3024853/1‑150 (MQ=255) cATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCAc < 2:2600825/150‑1 (MQ=255) tAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCAccg > 2:3973632/1‑150 (MQ=255) | ACCATGTCGCGTTTATGGTCAGCCAGAACGATCCCGGCTCGTTGATAGATCAATTGACTTATCCGCCGAAAATGCGCGTCGGAAAGCGCCAGGCGCTCGGTCATCTGTAACAATAAAGACGTTTGCCCACAGGGCAGAGATGAAGTCATAGCGCCTTCTCAATCACTTCAGGATACCACTGGCGCAATTTGTAACTGCACCGACTCATGTCGTGCTACTTCATGTTCTTCAAGGGTAAATACCGCCACACGCGACGAAAGATGGTCGGCCTGATTCGCCAGTTGTTCCGTTGCCACCGC > CP009273/1963473‑1963771 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |