Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 2,093,160 A→C 8.6% intergenic (‑66/+183) ugd ← / ← gnd UDP‑glucose 6‑dehydrogenase/6‑phosphogluconate dehydrogenase, decarboxylating

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,093,1600AC 8.6% 894.6 / 70.3 337intergenic (‑66/+183)ugd/gndUDP‑glucose 6‑dehydrogenase/6‑phosphogluconate dehydrogenase, decarboxylating
Reads supporting (aligned to +/- strand):  ref base A (113/194);  new base C (10/19);  total (123/214)
Fisher's exact test for biased strand distribution p-value = 8.44e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.80e-01

Only 100 of 354 total aligned reads displayed.

TAATGCCACAACCTCATGATTTTGTGCGATTAGAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGATATTTGGCAAAAAAAAGCCCGGTGCAATATACG  >  CP009273/2093011‑2093309
                                                                                                                                                     |                                                                                                                                                      
 aaTGCCACAACCTCATGATTTTGTGCGATTAGAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAg                                                                                                                                                       <  2:3352197/150‑1 (MQ=255)
      cacaACCTCATGATTTTGTGCGATTAGAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAACGTTTTa                                                                                                                                                  >  2:1590621/1‑150 (MQ=255)
      cacaACCTCATGATTTTGTGCGATTAGAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTa                                                                                                                                                  >  2:3223580/1‑150 (MQ=255)
      cacaACCTCATGATTTTGTGCGATTAGAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTa                                                                                                                                                  >  1:5223133/1‑150 (MQ=255)
      cacaACCTCATGATTTTGTGCGATTAGAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTa                                                                                                                                                  <  2:814368/150‑1 (MQ=255)
        caACCTCATGATTTTGTGCGATTAGAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGGTTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAAc                                                                                                                                                <  1:3583195/150‑1 (MQ=255)
        caACCTCATGATTTTGTGCGATTAGAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAAc                                                                                                                                                >  2:2797286/1‑150 (MQ=255)
        caACCTCATGATTTTGTGCGATTAGAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAAc                                                                                                                                                <  2:3669889/150‑1 (MQ=255)
          aCCTCATGATTTTGTGCGATTAGAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGc                                                                                                                                              >  2:4428369/1‑150 (MQ=255)
                tGATTTTGTGCGATTAGAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACgtt                                                                                                                                        <  1:2499221/150‑1 (MQ=255)
                 gATTTTGTGCGATTAGAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTACCTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACgctg                                                                                                                                       <  1:4974084/150‑1 (MQ=255)
                   ttttGTGCGATTAGAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACgttgtt                                                                                                                                     >  1:584193/1‑150 (MQ=255)
                   ttttGTGCGATTAGAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACgttgtt                                                                                                                                     <  1:3484916/150‑1 (MQ=255)
                    tttGTGCGATTAGAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTc                                                                                                                                    >  1:4962333/1‑150 (MQ=255)
                      tgtgCGATTAGAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGa                                                                                                                                  >  1:91030/1‑150 (MQ=255)
                        tgCGATTAGAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAACGTTTTAACGCTACGTTGTTCGATg                                                                                                                                <  1:3031727/150‑1 (MQ=255)
                        tgCGATTAGAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATg                                                                                                                                <  1:3070518/150‑1 (MQ=255)
                          cGATTAGAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGt                                                                                                                              <  2:2077441/150‑1 (MQ=255)
                            aTTAGAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTTGATGGTca                                                                                                                            <  1:1430236/150‑1 (MQ=255)
                            aTTAGAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTca                                                                                                                            <  2:1509055/150‑1 (MQ=255)
                            aTTAGAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTca                                                                                                                            <  2:3115515/150‑1 (MQ=255)
                             ttAGAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTcaa                                                                                                                           <  1:2971552/150‑1 (MQ=255)
                              tAGAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTcaac                                                                                                                          <  2:4275469/150‑1 (MQ=255)
                              tAGAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTcaac                                                                                                                          <  1:219453/150‑1 (MQ=255)
                                gAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAACGTTTTAACGCTACGTTGTTCGATGGTcaacgc                                                                                                                        >  1:4549771/1‑150 (MQ=255)
                                 aaGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTcaacgca                                                                                                                       >  1:1701403/1‑150 (MQ=255)
                                   gCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTcaacgcaac                                                                                                                     <  1:4227933/150‑1 (MQ=255)
                                          tGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAAc                                                                                                              <  2:3003382/150‑1 (MQ=255)
                                             cAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAAt                                                                                                           <  2:1075731/150‑1 (MQ=255)
                                              aaGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAAtt                                                                                                          >  2:3453715/1‑150 (MQ=255)
                                              aaGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAAtt                                                                                                          <  1:3992289/150‑1 (MQ=255)
                                                gCCTACAGAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCa                                                                                                        <  2:1748222/150‑1 (MQ=255)
                                                   tACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGAt                                                                                                     <  1:3216795/150‑1 (MQ=255)
                                                     cATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGAttt                                                                                                   >  1:4499288/1‑150 (MQ=255)
                                                     cATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGAttt                                                                                                   <  2:3801045/150‑1 (MQ=255)
                                                     cATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGAttt                                                                                                   <  2:1130681/150‑1 (MQ=255)
                                                        aGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCt                                                                                                >  2:211808/1‑150 (MQ=255)
                                                        aGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATACAGATTTTCt                                                                                                >  1:3012492/1‑150 (MQ=255)
                                                         gCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCtt                                                                                               <  1:3798196/150‑1 (MQ=255)
                                                         gCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCtt                                                                                               >  1:3325062/1‑150 (MQ=255)
                                                            aGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTtat                                                                                            >  2:4549348/1‑150 (MQ=255)
                                                            aGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTtat                                                                                            <  1:3850089/150‑1 (MQ=255)
                                                             gTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTTAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTtata                                                                                           <  2:3833003/150‑1 (MQ=255)
                                                             gTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTtata                                                                                           <  2:2478038/150‑1 (MQ=255)
                                                               aCCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAg                                                                                         >  1:1940930/1‑150 (MQ=255)
                                                                ccGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGa                                                                                        <  1:2434608/150‑1 (MQ=255)
                                                                ccGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGa                                                                                        <  1:211808/150‑1 (MQ=255)
                                                                  ggAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAATGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAAt                                                                                      <  1:3709153/150‑1 (MQ=255)
                                                                  ggAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAAt                                                                                      <  1:4925121/150‑1 (MQ=255)
                                                                  ggAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAAt                                                                                      >  2:1370962/1‑150 (MQ=255)
                                                                   gAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAACGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATa                                                                                     <  2:2879511/150‑1 (MQ=255)
                                                                   gAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATa                                                                                     <  1:3247165/150‑1 (MQ=255)
                                                                    aaaTGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAg                                                                                    <  2:2026819/150‑1 (MQ=255)
                                                                      aTGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCt                                                                                  <  2:2594227/150‑1 (MQ=255)
                                                                         gTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGat                                                                               >  2:5176031/1‑150 (MQ=255)
                                                                          tGATTTTCATTTTATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAACGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGata                                                                              <  2:1414264/150‑1 (MQ=255)
                                                                            aTTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGAtatt                                                                            <  2:2145636/150‑1 (MQ=255)
                                                                              tttcatttcaTGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGAtattta                                                                          <  1:4845955/150‑1 (MQ=255)
                                                                                tcatttcatGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGAtatttatt                                                                        <  2:4708423/150‑1 (MQ=255)
                                                                                 catttcatGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATttatta                                                                       >  2:1870011/1‑150 (MQ=255)
                                                                                   tttcatGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAACGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAg                                                                     <  2:851597/150‑1 (MQ=255)
                                                                                    ttcatGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGt                                                                    <  1:2541953/150‑1 (MQ=255)
                                                                                     tcatGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGtt                                                                   <  1:2326918/150‑1 (MQ=255)
                                                                                     tcatGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGtt                                                                   <  2:67331/150‑1 (MQ=255)
                                                                                          ctctCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAatat                                                              <  2:4991104/150‑1 (MQ=255)
                                                                                          ctctCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAatat                                                              <  2:923090/150‑1 (MQ=255)
                                                                                           tctcAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATAtt                                                             <  1:3512008/150‑1 (MQ=255)
                                                                                             tcAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTaa                                                           >  2:4212780/1‑150 (MQ=255)
                                                                                              cAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAg                                                          <  1:1185375/150‑1 (MQ=255)
                                                                                                  aTTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGt                                                      >  1:275188/1‑150 (MQ=255)
                                                                                                  aTTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGt                                                      >  1:3339171/1‑150 (MQ=255)
                                                                                                    taacttaactGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATTTTAAGCAGTGa                                                    <  1:962642/150‑1 (MQ=255)
                                                                                                    taacttaactGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGa                                                    >  1:3731638/1‑150 (MQ=255)
                                                                                                       cttaactGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAAt                                                 >  2:5092313/1‑150 (MQ=255)
                                                                                                       cttaactGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAAt                                                 >  2:2446195/1‑150 (MQ=255)
                                                                                                             tgtgAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTc                                           <  2:465448/150‑1 (MQ=255)
                                                                                                              gtgAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCt                                          <  1:1145023/150‑1 (MQ=255)
                                                                                                                gAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCtat                                        <  2:1971423/150‑1 (MQ=255)
                                                                                                                gAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTATTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCtat                                        >  2:462294/1‑150 (MQ=255)
                                                                                                                 aaTCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCtata                                       <  1:81182/150‑1 (MQ=255)
                                                                                                                 aaTCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCtata                                       <  2:4093035/150‑1 (MQ=255)
                                                                                                                  aTCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATaa                                      <  1:4434640/150‑1 (MQ=255)
                                                                                                                     atgatgTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGat                                   <  1:2831727/150‑1 (MQ=255)
                                                                                                                     atgatgTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGat                                   >  2:4923178/1‑150 (MQ=255)
                                                                                                                      tgatgTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGata                                  >  1:1857212/1‑150 (MQ=255)
                                                                                                                      tgatgTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGata                                  <  2:584193/150‑1 (MQ=255)
                                                                                                                       gatgTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGatat                                 >  1:752364/1‑150 (MQ=255)
                                                                                                                        atgTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGATAtt                                <  1:1370535/150‑1 (MQ=255)
                                                                                                                         tgTTTTTAGCATCCTGATAAGAGCTAAACGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGATAttt                               <  1:4578354/150‑1 (MQ=255)
                                                                                                                            ttttAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGATATTTGGc                            <  1:429430/150‑1 (MQ=255)
                                                                                                                                   aTCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGATATTTGGCaaaaaaa                    <  1:435054/150‑1 (MQ=255)
                                                                                                                                       tGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGATATTTGGCAAAAAAAAGcc                >  1:1665025/1‑150 (MQ=255)
                                                                                                                                         aTAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGATATTTGGCAAAAAAAAGCCCg              >  1:4106939/1‑150 (MQ=255)
                                                                                                                                            agagCTAAAATTTTTAACGCTACGTTGTTCGATGGTCAACGCAACTAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGATATTTGGCAAAAAAAAGCCCGGTg           <  1:5070690/150‑1 (MQ=255)
                                                                                                                                                cTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGATATTTGGCAAAAAAAAGCCCGGTGCAat       >  2:273977/1‑150 (MQ=255)
                                                                                                                                                  aaaaGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGATATTTGGCAAAAAAAAGCCCGGTGCAatat     >  1:1542828/1‑150 (MQ=255)
                                                                                                                                                   aaaGTTTTAACGATACGTTGTTCGATGGTCAACGCAACGAAAAACAATTAAGATTTTCTTTATAATAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTTGTCTATAAGATATTTGGCAAAAAAAAAGCCCGGTGCAatat     <  1:2624203/150‑1 (MQ=255)
                                                                                                                                                    aaGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGATATTTGGCAAAAAAAAGCCCGGTGCAATATAc   <  2:4551500/150‑1 (MQ=255)
                                                                                                                                                    aaGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGATATTTGGCAAAAAAAAGCCCGGTGCAATATAc   <  2:2938596/150‑1 (MQ=255)
                                                                                                                                                     aGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGATATTTGGCAAAAAAAAGCCCGGTGCAATATACg  >  1:1011669/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
TAATGCCACAACCTCATGATTTTGTGCGATTAGAAGCCCGTTTGACAAGCCTACATAGCCAGTACCGGAAATGGTGATTTTCATTTCATGCTCTCAGAATTAACTTAACTGTGAATCATGATGTTTTTAGCATCCTGATAAGAGCTAAAAGTTTTAACGCTACGTTGTTCGATGGTCAACGCAACGAAAAACAATTCAGATTTTCTTTATAAGAATAGCTGATATTTATTAAGTTAATATTAAGCAGTGAAATTTAGTCTATAAGATATTTGGCAAAAAAAAGCCCGGTGCAATATACG  >  CP009273/2093011‑2093309

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: