| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 199,229 | G→T | 100% | E61D (GAG→GAT) | lpxA → | UDP‑N‑acetylglucosamine acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 199,229 | 0 | G | T | 99.3% | 932.7 / ‑2.4 | 288 | E61D (GAG→GAT) | lpxA | UDP‑N‑acetylglucosamine acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (0/2); new base T (169/116); total (170/118) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.68e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 291 total aligned reads displayed.
CATTGTGGAAGAGGGCGCGTCAATTGGCGCGAACGCACACATTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAG > CP009273/199082‑199376 | cATTGTGGAAGAGGGCGCGTCAATTGGCGCGAACGCACACATTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGatat > 1:5089868/1‑150 (MQ=255) aTTGTGGAAGAGGGCGCGTCAATTGGCGCGAACGCACACATTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATAtt < 2:2107519/150‑1 (MQ=255) aTTGTGGAAGAGGGCGCGTCAATTGGCGCGAACGCACACATTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATAtt < 2:3883604/150‑1 (MQ=255) ggAAGAGGGCGCGTCAATTGGCGCGAACGCACACATTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCa > 1:2592985/1‑150 (MQ=255) gAAGAGGGCGCGTCAATTGGCGCGAACGCACACATTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAg < 1:462599/150‑1 (MQ=255) aaGAGGGCGCGTCAATTGGCGCGAACGCACACATTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGt < 1:1347071/150‑1 (MQ=255) gagGGCGCGTCAATTGGCGCGAACGCACACATTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGTCCGCGATAATGATATTTATCAGTTc > 1:1539087/1‑150 (MQ=255) cgcgTCAATTGGCGCGAACGCACACATTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTc < 1:935756/150‑1 (MQ=255) cgTCAATTGGCGCGAACGCACACATTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCa < 1:177640/150‑1 (MQ=255) gTCAATTGGCGCGAACGCACACATTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCAt > 2:1180519/1‑150 (MQ=255) gTCAATTGGCGCGAACGCACACATTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCAt > 2:1635901/1‑150 (MQ=255) tCACTTGGCGCGAACGCACACATTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATc < 2:5160660/150‑1 (MQ=255) tCAATTGGCGCGAACGCACACATTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATc < 2:4914618/150‑1 (MQ=255) tCAATTGGCGCGAACGCACACATTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATc < 1:2430357/150‑1 (MQ=255) tCAATTGGCGCGAACGCACACATTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAAACCTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATc > 2:57510/1‑150 (MQ=255) aTTGGCGCGAACGCACACATTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGc > 1:2092454/1‑150 (MQ=255) tGGCGCGAACGCACACATTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGa > 1:644280/1‑150 (MQ=255) ggCGCGAACGCACACATTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGaa < 2:500227/150‑1 (MQ=255) gcgAACGCACACATTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGtt < 1:3325682/150‑1 (MQ=255) gAACGCACACATTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTaa > 2:4017853/1‑150 (MQ=255) aaCGCACACATTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAAc > 2:3606025/1‑150 (MQ=255) gctcacaTTGTTCCTTTTTGGATCGTTGGCCCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAg < 2:4956603/147‑1 (MQ=255) acacaTTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCCCCATCGGCGAAGTTAACCAGGa > 2:5031576/1‑150 (MQ=255) cacaTTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGAt < 1:4832514/150‑1 (MQ=255) acaTTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATc < 2:5283808/150‑1 (MQ=255) acaTTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATc > 1:4100716/1‑150 (MQ=255) caTTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCt > 1:5259377/1‑150 (MQ=255) caTTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCt < 2:100533/150‑1 (MQ=255) caTTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCt > 1:1218285/1‑150 (MQ=255) aTTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTg < 1:4966285/150‑1 (MQ=255) ggTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGaaa > 1:734252/1‑150 (MQ=255) gTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAat > 1:1570512/1‑150 (MQ=255) ccTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAatat < 1:2578029/150‑1 (MQ=255) ccTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAatat < 2:2334399/150‑1 (MQ=255) ccTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAatat > 1:1726777/1‑150 (MQ=255) ccTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAatat < 1:3071616/150‑1 (MQ=255) cTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATg > 1:2729454/1‑150 (MQ=255) tttttGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGc < 2:2384560/150‑1 (MQ=255) ttttGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCt < 2:3287892/150‑1 (MQ=255) tttGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTg < 2:2064737/150‑1 (MQ=255) tGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGc < 1:3964020/150‑1 (MQ=255) tGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGc < 1:3399548/150‑1 (MQ=255) aTCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGaa > 1:601967/1‑150 (MQ=255) tCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAAc > 1:2005532/1‑150 (MQ=255) tGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAAAGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGAc > 2:901531/1‑150 (MQ=255) ccccATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCgt > 2:815594/1‑150 (MQ=255) cATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGtgtg > 1:4069699/1‑150 (MQ=255) cGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAAt < 2:244976/150‑1 (MQ=255) cGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAAt > 2:2856604/1‑150 (MQ=255) cGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAAt > 2:1609213/1‑150 (MQ=255) cGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGAGAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAAt < 2:294992/150‑1 (MQ=255) gAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATc > 1:831068/1‑150 (MQ=255) aaaTTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCg > 2:4536847/1‑150 (MQ=255) aTTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGc > 2:1613037/1‑150 (MQ=255) gggTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTaa < 2:4239770/150‑1 (MQ=255) ggTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAAc > 2:1755887/1‑150 (MQ=255) gTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCAtt > 1:4511838/1‑150 (MQ=255) gTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCAtt > 2:3098014/1‑150 (MQ=255) tACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTc > 2:2569455/1‑150 (MQ=255) tACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTc < 1:3744370/150‑1 (MQ=255) aCTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTcg > 1:921183/1‑150 (MQ=255) cTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTcgc > 2:4554873/1‑150 (MQ=255) tGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTcgcg < 1:435545/150‑1 (MQ=255) aaaTCTCACGTTGTCGTGAATGGTCCTACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATAGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCAGTGTGGAAATCGGCGATCGTAACCGCATTCTCGaa > 1:2034716/1‑150 (MQ=255) aaTCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGaaa > 2:104613/1‑150 (MQ=255) tctcACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGc < 2:3678291/150‑1 (MQ=255) ctcACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCg < 1:3897145/150‑1 (MQ=255) ctcACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCg > 1:4805841/1‑150 (MQ=255) tGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCAt > 1:778993/1‑150 (MQ=255) cGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCa < 1:2548811/150‑1 (MQ=255) cGTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCa < 1:3534102/150‑1 (MQ=255) gTGAATGGTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCAt > 1:797445/1‑150 (MQ=255) ggTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGTGGc > 2:3535616/1‑150 (MQ=255) gTCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCCTTCATCGTGGca > 2:4114140/1‑150 (MQ=255) tCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGTGGcac < 1:1627171/150‑1 (MQ=255) tCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGTGGcac < 1:2074629/150‑1 (MQ=255) tCATACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGTGGcac < 2:4661069/150‑1 (MQ=255) aTACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAg > 1:1015609/1‑150 (MQ=255) aTACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAg > 1:2819366/1‑150 (MQ=255) tACTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGt > 1:2996374/1‑150 (MQ=255) aCTAAAATTGGCCCCGATAATGATATTTCTCAGTTCGCCTCCCTCGGCGACGTTACCCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGAGCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGACGCACAGTc > 2:1363173/1‑150 (MQ=255) cTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCATGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTcc < 2:4565056/150‑1 (MQ=255) cTAAAATTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTcc < 1:5204593/150‑1 (MQ=255) aaaaTTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAGGCGTCACCATTCATCGTGGCACAGTCCAg > 2:2796255/1‑150 (MQ=255) aaaaTTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAg < 2:2228025/150‑1 (MQ=255) aaaTTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAgg < 1:3576077/150‑1 (MQ=255) aaaTTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAgg > 2:4850757/1‑150 (MQ=255) aaaTTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAgg > 2:3019078/1‑150 (MQ=255) aaTTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAggg > 1:2311162/1‑150 (MQ=255) aaTTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGGGTGGAAATCGGCGATCGTAACCGCATTCGCGAACGCGTCACCATGCAGCGTGGCACAGTCCAggg > 2:3950527/1‑150 (MQ=255) aTTGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGc < 2:2005532/150‑1 (MQ=255) ttGGCCGCGATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCg > 2:3561800/1‑150 (MQ=255) cgcgATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCAACGTGGCACAGTCCAGGGCGGTGGa > 1:2957731/1‑150 (MQ=255) gATAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTg > 2:1656587/1‑150 (MQ=255) aTAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGa > 1:1848010/1‑150 (MQ=255) aTAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGa < 2:1511677/150‑1 (MQ=255) aTAATGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGa > 2:1845029/1‑150 (MQ=255) aaTGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACg > 2:3042993/1‑150 (MQ=255) aTGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGa > 1:4234463/1‑150 (MQ=255) aTGATATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCATTGAGGAAATCGGCGATAGTAACCGCATACGCGAAAGCGTCACAATTCATCGTGGCACAGTCCAGGGCGGTGGATTTACGa > 1:1116969/1‑150 (MQ=255) | CATTGTGGAAGAGGGCGCGTCAATTGGCGCGAACGCACACATTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAG > CP009273/199082‑199376 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |