| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,126,771 | C→A | 13.7% | E36D (GAG→GAT) | wcaA ← | putative glycosyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,126,771 | 0 | C | A | 13.7% | 1137.1 / 96.5 | 360 | E36D (GAG→GAT) | wcaA | putative glycosyl transferase |
| Reads supporting (aligned to +/- strand): ref base C (184/126); new base A (23/26); total (207/153) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.20e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 383 total aligned reads displayed.
CCTTGCGCCAGCATAATCGCCTGGTTACGTACCGCGCACGCCCCGCTGTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATG > CP009273/2126622‑2126920 | ccTTGCGCCAGCATAATCGCCTGGTTACGTACCGCGCACGCCCCGCTGTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGatcatc < 2:4674780/150‑1 (MQ=255)ccTTGCGCCAGCATAATCGCCTGGTTACGTACCGCGCACGCCCCGCTGTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGatcatc < 1:1327223/150‑1 (MQ=255) cTTGCGCCAGCATAATCGCCTGGTTACGTACCGCGCACGCCCCGCTGTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCAtct < 2:3040646/150‑1 (MQ=255) ttGCGCCAGCATAATCGCCTGGTTACGTACCGCGCACGCCCCGCTGTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCAtctc < 2:1076132/150‑1 (MQ=255) tGCGCCAGCATAATCGCCTGGTTACGTACCGCGCACGCCCCGCTGTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTcc < 2:1637914/150‑1 (MQ=255) cAGCATAATCGCCTGGTTACGTACCGCGCACGCCCCGCTGTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGtt > 2:2488706/1‑150 (MQ=255) aGCATAATCGCCTGGTTACGTACCGCGCACGCCCCGCTGTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTg > 2:4598787/1‑150 (MQ=255) cATAATCGCCTGGTTACGTACCGCGCACGCCCCGCTGTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCt < 1:540943/150‑1 (MQ=255) cGCCTGGTTACGTACCGCGCACGCCCCGCTGTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTc > 2:3600544/1‑150 (MQ=255) ccTGGTTACGTACCGCGCACGCCCCGCTGTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCt > 2:1608120/1‑150 (MQ=255) ccTGGTTACGTACCGCGCACGCCCCGCTGTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCt < 1:3486681/150‑1 (MQ=255) ccTGGTTACGGACCGCGCACGCCCCGCTGTTAATGTCGTTGTGAATGTTAGTGATACGCGGATCGTTGTGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCATTCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCt < 1:3291144/150‑1 (MQ=255) cTGGTTACGTACCGCGCACGCCCCGCTGTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTg > 1:4293320/1‑150 (MQ=255) cTGGTTACGTACCGCGCACGCCCCGCTGTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTg < 1:2619617/150‑1 (MQ=255) tGGTTACGTACCGCGCACGCCCCGCTGTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTgg > 2:789912/1‑150 (MQ=255) tGGTTACGTACCGCGCACGCCCCGCTGTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTgg > 1:3550769/1‑150 (MQ=255) gTACCGCGCACGCCCCGCTGTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCaaaa > 2:4505389/1‑150 (MQ=255) aCCGCGCACGCCCCGCTGTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATATCCCAGTTGCTGTAGTCCTGGCGCAAAAcc > 1:4495827/1‑150 (MQ=255) ccGCGCACGCCCCGCTGTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCg < 1:4929662/150‑1 (MQ=255) cgcgCACGCCCCGCTGTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATATCCCAGTTGCTGTAGTCCTGGCGCAAAACCGa > 2:1371382/1‑150 (MQ=255) gcgcACGCCCCGCTGTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGAt < 2:5213621/150‑1 (MQ=255) gcgcACGCCCCGCTGGGCAGGTCGTGGTGACTGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTGGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGAt > 2:354280/1‑150 (MQ=255) cgcACGCCCCGCTGTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGAtt > 2:736973/1‑150 (MQ=255) cgcACGCCCCGCTGTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGAtt < 1:4770785/150‑1 (MQ=255) cGCCCCGCTGTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTAt < 1:1005199/150‑1 (MQ=255) cccGCTGTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGc > 1:2708159/1‑150 (MQ=255) gCTGTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCg > 2:4951928/1‑150 (MQ=255) tGTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCTTTGAGGGCGGTGACGTAATGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTTCTTTAGTCCTTGCTCAAAACCGATTTTATTGCCAGaa > 1:852189/1‑150 (MQ=255) gTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAAt < 2:3075569/150‑1 (MQ=255) gTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAAt > 1:1690401/1‑150 (MQ=255) tAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCg > 2:2600938/1‑150 (MQ=255) gTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAg > 2:3483793/1‑150 (MQ=255) tCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAgt < 1:2355516/150‑1 (MQ=255) cGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTTTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAgtt > 2:2437031/1‑150 (MQ=255) gTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAgttg < 1:4004750/150‑1 (MQ=255) gTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAgttg < 2:4445976/150‑1 (MQ=255) gTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAgttg > 1:5120223/1‑150 (MQ=255) tgtgAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCACAACCGATTTTATTGCCCGAATCGCCAgttgtt > 2:4832730/1‑150 (MQ=255) gtgAATGTAAGTGATCCGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGttgttg < 2:5098234/150‑1 (MQ=255) aTGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCgg > 1:2181771/1‑150 (MQ=255) tGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAgg < 2:1842602/150‑1 (MQ=255) gATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATATCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGt > 1:4106743/1‑150 (MQ=255) gANACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGt > 1:623581/1‑150 (MQ=255) aTAAGCGGATCGTTGAGGTCGGTGACGTACAGAAGCAGTTGTACCCAGGAGGTGGAGCAATCAACCACGAAGATCAACACCCACTTGAAGTAGTCCTGGCGCAAAACCGATATTATAGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTc > 2:1021384/1‑150 (MQ=255) ggATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACTATGATCATATCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCata < 1:3956389/150‑1 (MQ=255) ggATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGATCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCata > 1:1279262/1‑150 (MQ=255) tCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAg < 1:14466/150‑1 (MQ=255) ttGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGAtt > 2:2318875/1‑150 (MQ=255) tGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTg < 2:2808212/150‑1 (MQ=255) tGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATATCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTg < 2:4063754/150‑1 (MQ=255) gAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATATCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTga > 1:3649200/1‑150 (MQ=255) aGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTgag > 2:1182914/1‑150 (MQ=255) aGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTgag > 2:2860190/1‑150 (MQ=255) aGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATATCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTgag > 2:2991394/1‑150 (MQ=255) gggCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTgaga > 1:1925498/1‑150 (MQ=255) gggCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATATCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTgaga < 2:1275896/150‑1 (MQ=255) gCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATc < 2:445837/150‑1 (MQ=255) gACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCgg > 1:4732890/1‑150 (MQ=255) cGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGAt > 2:3908819/1‑150 (MQ=255) cGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGAt > 2:4004125/1‑150 (MQ=255) aCTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGt > 1:353386/1‑150 (MQ=255) cTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGtt > 2:573046/1‑150 (MQ=255) tGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGttt < 2:2782085/150‑1 (MQ=255) tGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGttt > 2:1529755/1‑150 (MQ=255) tGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATATCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGttt < 1:1959415/150‑1 (MQ=255) ttGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGttttt < 2:5263620/150‑1 (MQ=255) tGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATATCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTc < 1:3324766/150‑1 (MQ=255) cAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATATCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCAt < 2:2054289/150‑1 (MQ=255) aGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTTAGATCAGCGGATTGTTTTTCATa > 1:2045591/1‑150 (MQ=255) tgttCCCAGGATGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGgt < 1:3007191/150‑1 (MQ=255) gttCCCAGGAGNTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGgtt > 1:2761625/1‑150 (MQ=255) cccAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGgttgtt < 1:2086888/150‑1 (MQ=255) cccAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGgttgtt > 2:4316795/1‑150 (MQ=255) ccAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTtc > 2:1823164/1‑150 (MQ=255) aggaggTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAATCCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTtctc > 2:1970020/1‑150 (MQ=255) aggaggTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTtctc > 2:3793917/1‑150 (MQ=255) gaggTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTccc < 1:1553721/150‑1 (MQ=255) aggTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGGTGTTGGCGGTTCCAGGTCGGCAGATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCg > 2:2758627/1‑150 (MQ=255) aggTGGAGCAATCATCCACGATGATCATATCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCg > 1:2002684/1‑150 (MQ=255) gTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGc > 2:4218886/1‑150 (MQ=255) tGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCt < 1:4957554/150‑1 (MQ=255) ggAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCtt > 2:4149801/1‑150 (MQ=255) gAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTa < 1:1141492/150‑1 (MQ=255) aGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTAt > 1:1744937/1‑150 (MQ=255) gCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATg > 2:2190634/1‑150 (MQ=255) cAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGa > 1:5039883/1‑150 (MQ=255) aaTCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAg > 2:3236381/1‑150 (MQ=255) atcatcCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGc > 1:588205/1‑150 (MQ=255) atcCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTgg < 1:390202/150‑1 (MQ=255) atcCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTgg > 1:2313732/1‑150 (MQ=255) cACGCTGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGttt < 2:609464/150‑1 (MQ=255) cACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGttt > 1:91856/1‑150 (MQ=255) aCGATGATCATATCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTttg > 2:4440211/1‑150 (MQ=255) gatgatCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTttgct > 1:3219894/1‑150 (MQ=255) atgatCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTttgctt > 1:4021152/1‑150 (MQ=255) tgatCATCTCCCAGTTGCTGAAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTttgcttg < 2:2244474/150‑1 (MQ=255) gatCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTttgcttgc > 1:1022433/1‑150 (MQ=255) gatCATATCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGTTTGTTCTCCCGGCTTATGAGCTGGTttgcttgc > 1:2521457/1‑150 (MQ=255) atcataTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGcc > 1:52555/1‑150 (MQ=255) tcataTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCg > 1:2882689/1‑150 (MQ=255) | CCTTGCGCCAGCATAATCGCCTGGTTACGTACCGCGCACGCCCCGCTGTTAATGTCGTTGTGAATGTAAGTGATACGCGGATCGTTGAGGGCGGTGACGTACTGTTGCAGTTGTTCCCAGGAGGTGGAGCAATCATCCACGATGATCATCTCCCAGTTGCTGTAGTCCTGGCGCAAAACCGATTTTATTGCCCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATG > CP009273/2126622‑2126920 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |