| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,170,724 | G→T | 23.4% | intergenic (‑41/+267) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,170,724 | 0 | G | T | 23.4% | 576.1 / 37.9 | 272 | intergenic (‑41/+267) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base G (79/114); new base T (48/23); total (131/141) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.57e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 278 total aligned reads displayed.
TTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATAC > CP009273/2170575‑2170873 | tttCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑Tg < 1:1554646/150‑1 (MQ=255) tACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAat < 2:317358/150‑1 (MQ=255) accaccACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAatt < 1:3153065/150‑1 (MQ=255) accaccACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAatt < 1:3097388/150‑1 (MQ=255) accaccACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAatt < 2:2401983/150‑1 (MQ=255) ccaccaCTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAatta < 1:1088708/150‑1 (MQ=255) ccaccaCTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACAGTTTCATATCCTGTCGTGTGTTTTAGATTTAAAAATATAA‑‑TTAAaata > 2:2712032/1‑150 (MQ=255) accacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAattatt < 1:600452/150‑1 (MQ=255) ccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAATTAttt < 2:4736784/150‑1 (MQ=255) ccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAATTAttt < 2:2119631/150‑1 (MQ=255) cacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAATTATTTg < 1:2562379/150‑1 (MQ=255) acTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAATTATTTGt < 1:5119907/150‑1 (MQ=255) gCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAATTATTTGttttt < 1:3783970/150‑1 (MQ=255) gCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAAAATAA‑‑ATAAATTATtttttttt > 1:1184794/1‑150 (MQ=255) cATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTCGATTTAAAAAAATAA‑‑TTAAATTATTTGTTTTTa > 2:2546418/1‑150 (MQ=255) cGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAat < 1:2628622/150‑1 (MQ=255) cGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTGGATTTAAAAAAAAAA‑‑TTAAAATTTTTTTTTTTTAat > 1:16084/1‑150 (MQ=255) gTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGGTTTAAAAAAAAAAATTAAAAATATTTTTTTTTaaa > 1:1389083/1‑150 (MQ=255) gTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAata < 1:282279/150‑1 (MQ=255) tttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAatat < 1:3888591/150‑1 (MQ=255) ttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATc < 1:4770536/150‑1 (MQ=255) ttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATc < 2:4382555/150‑1 (MQ=255) tCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCAGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCg < 2:2128420/150‑1 (MQ=255) cGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTCGCATTCAAAAAATAA‑‑TGAAAATATTTTTTTTTAAATATCga > 2:5002391/1‑150 (MQ=255) cGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCga < 1:733262/150‑1 (MQ=255) gagaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCgag < 1:790653/150‑1 (MQ=255) gagaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCgag < 1:1241669/150‑1 (MQ=255) agaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTAAAAATATAA‑‑ATAAAATATTTTTTTTTTAATATAgata > 1:2907432/1‑148 (MQ=255) agaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTAAAAAAAAAA‑‑TTAAAAAAATTTTTTTTTAatatatata > 1:3627541/1‑145 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATa < 1:964754/150‑1 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATa < 2:172624/150‑1 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACAGTTTCATATCCTGTCGTTTGGTTTCGAATTCAAAATATAA‑‑AGAAATAATTTTTTTTTAAATATAGAtata > 2:3024741/1‑150 (MQ=255) tgtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAAc < 1:4167344/150‑1 (MQ=255) aaTATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATc < 1:1469474/150‑1 (MQ=255) aaTATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTAATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATc < 1:3041298/150‑1 (MQ=255) atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATca < 1:3496473/150‑1 (MQ=255) tatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTAAAAATATAA‑‑TTAAATTATTTTTTTTTTTATATATATATAAAGATcaa > 1:1999593/1‑149 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATcaca < 2:1294926/150‑1 (MQ=255) tGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACg < 2:3883191/150‑1 (MQ=255) cGGAACCGCATACCCGCCGCGGTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACa < 2:1105357/150‑1 (MQ=255) cGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAATATAA‑‑TTAAATTATTTTTTTTTTAATATAGAGATTAAGATAACAAAAACGACa > 1:5225769/1‑150 (MQ=255) ggAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTAGATTTAAAAAAATAA‑‑TGAAATTAATTTTTTTTTAATATGGAGGTAACGATCACaacaacttcaa > 1:1880928/1‑145 (MQ=255) gcttAACCGCCGCGCTTTGCGGTGTTCAGCATCTGCTTTGTCGATACCACTTACTTTTTCATATCCTGTCGTTTGTTTTCTTTTTCAAAATATAT‑‑TGAAATTATTTGTTTTTAAATATCGTGATAACGATCAAAAAAACGACAATATGaa < 2:4431494/147‑1 (MQ=255) cATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGTTTTAAAAAAATAA‑‑ATAAAATAATTTTTTTTTTATATATGGATAAAGATAAAAAAAAAAACAAAAAGaaa > 1:459676/1‑150 (MQ=255) aTAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTGATTTGAAAAAAAAA‑‑ATAAATTATTTTTTTTTTTATATAGTTATGACAGTAAAAAAAAAAACAAAATGaaaa > 1:4108384/1‑150 (MQ=255) ccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCTATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCg < 2:3694869/150‑1 (MQ=255) cgcTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCgagg < 2:426732/150‑1 (MQ=255) cTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAAAATAA‑‑TGAAATTATTTTTTTTTAAATATAGAGATAAAGATAACAAAAAAGACAAAATTTAAATAATTGgaggtg > 2:3124542/1‑148 (MQ=255) cTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTGATTTAAAAAAATAA‑‑TTTAAATATTTTTTTTTTAATATAGAGATAAAGATAAAAAAAAAGAAAAAATTAAAaatattagtggtg > 1:5169399/1‑143 (MQ=255) tgtgCGTTTTTCAGCATCTGCTTTGTCGATACCCCGTACATTTACATATCCGGTCTTTTGTTTTCGATTTCAAAATATAA‑‑TGAAATTATTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGt < 2:3627541/150‑1 (MQ=255) tgtgCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTGAAAATATAA‑‑TTAAATTATTTTTTTTTTAAAATAGAGGTAAAGATAACAAAAACTAAAAGATGTAAATTATTAgaggagg > 2:1937263/1‑149 (MQ=255) tgCGTTGTCCCGCATCTGCTTTGTCGATACCCCTTACTTTTTAATATCCTGTCTTTTGTTTTCTATTACAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATACCGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGa < 1:4354656/150‑1 (MQ=255) gttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTAAAAAAATAA‑‑ATAAAATATTTTTTTTTAAATATAGAGATAAAGATAACAAAAAAGACAATATGAAAATTATTAGAGGAGGGAAAGGCa > 2:2503819/1‑150 (MQ=255) aTCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAATATAA‑‑TTTAATTTTTTTTTTTTTAATATAGAGATAAAGATAAAAAAAAAGACAATATTAAAAATATTAGAGGTGTGAAAGGCaaaaaaaa > 2:2655251/1‑149 (MQ=255) aTCTGCTTTGCCTATACCACGTACATTTTAATATCCTGTCTTTTTTTTTCTATTTCAAAATATAA‑‑TTAATTTATTTTTTTTTAAATATCGAGATAACGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAAc < 1:228523/150‑1 (MQ=255) cTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAAAAAACAAAAAAAAA‑‑TGAAAATATTAGTTTTTAAAAATCAAAATAAAAGTCACAAAAAAGAAAATAAGAAAAAAATTAAAAGAATGAAATGaaaaaaaaacg > 2:2451845/1‑147 (MQ=255) tGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTAAAAAAATAA‑‑ATAAAATATTTTTTTTTTAATATATAGATAAACATAAAAAAAAACAAAAAATTAAAAATATTAGAGGAGGGTAAGGCaaaaaaaaagc > 2:2291482/1‑146 (MQ=255) gatttGTCGATACAACTTAAATTTTCATATATTGTGGTTTTTTTTCTTTTTAAAAATTTAA‑‑TGAATTTTTTTTTTTTTAAATTGCTATATAACGATCACAAAAACGAAAATATGAAAATTATTCGAGGAGTTAAAGGCAAAAAAACGGcc < 2:3993747/148‑1 (MQ=255) tttGTCTATACCACTTAATTTTTCATATCTTTTTTTTTTTTTTCTTTTAAAAATTATAT‑‑TTATTTTTTTTTTTTTTAAATTTCTTTATAACTAACAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTc < 1:1706476/150‑1 (MQ=255) gTCGATACCACGTAAATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TTAAATTATTTGTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCg < 2:4677139/150‑1 (MQ=255) gATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTACAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATa < 2:3973570/150‑1 (MQ=255) aTACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGGTTTAAAAATATAA‑‑ATAAAATATTTTTTTTTTAATATAGAGATAAAGATAACAAAAACGACAATATTAAAATTATTAGAGGGGTGAAAGGGAAAAAAAAGGCCACCCGATAg > 1:407978/1‑150 (MQ=255) cACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTTAAAAAATAA‑‑ATTAAATATTTTTTTTTTAATAAAGAGGTAAAGGTCAACAAAAAGACAAAAATAAAATTATTAGAGGGGTGGAAGGGAAAAAAAAGGCCGCCCCAGAgggga > 2:4026818/1‑148 (MQ=255) cACGTACATTTACATATCCTGTCGTTTGTTTTCTATTACAAAATATAA‑‑TGAAATTTTTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGaa < 1:4442698/150‑1 (MQ=255) cGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAATATAA‑‑TGAAATTATTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATTAAAAATATTAGAGGAGTGAAAGGCAAAAAAACGGCCACCCCAGAGGGAAGc > 2:1651993/1‑150 (MQ=255) gTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAATATAA‑‑TTTAAATATTTTTTTTTTAATATAGAGATAAAGATAACAAAAAAGACAATATTAAATATATTAGTGGAGTGTAATGCAAAAAAAAGGCCGCCCGATAGGGTAGcc > 2:82567/1‑150 (MQ=255) atttttCATATCGTGTTTTTTTTTTTCTTTTAAAAAATATAA‑‑TTAATTTTTTTGTTTTTAAATATCTACAAACCGAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTa < 1:2409162/148‑1 (MQ=255) ttttCATATCCTGACGTTTGTTTTCGATTACAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGc < 2:4873296/150‑1 (MQ=255) atatCCTGTCGTTTGTTTTCGATTTAAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGt < 2:790337/150‑1 (MQ=255) tatCCTGTCGTTTGTTTTATAATTAAAAAAAAAA‑‑ATAAAATATTTTTTTTTTAATATAGATATAAAGATAAAAAAAAAAAAAAAAATAAAATTAATAGAGGAGTGAAAGGCAAAAAAACGGCCACCCGCTAGGGAAACCCAAGCacaatg > 2:3278839/1‑145 (MQ=255) tGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgt > 2:3674895/1‑150 (MQ=255) gTCGTTTGTTTTCGAATTCAAAATATAA‑‑TTAAAATAATTTTTTTTAAATATAGATATAACGATAAAAAAAACGACAAAAATAAAATTATTAGATGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGGAGCCGTAGCAAAGTGCGCgtg > 1:3714477/1‑150 (MQ=255) gcGTTTGTTTTCTATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgtgt < 2:5265570/149‑1 (MQ=255) gtttgtttTCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 2:1120913/1‑150 (MQ=255) tttgtttTCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtttt > 2:3159929/1‑150 (MQ=255) ttgtttTCGATTTCAAAATATAC‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttttt < 2:2828806/150‑1 (MQ=255) tgtttTCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTa > 1:3307865/1‑150 (MQ=255) gtttTCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTAt > 1:3135306/1‑150 (MQ=255) gtttTCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTAt > 2:3395845/1‑150 (MQ=255) ttttataTTTAAAAATATAA‑‑TTATATTATTTTTTTTTAAATATCTATAAAACGAAAAAAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATg < 1:2372437/144‑1 (MQ=255) ttttCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATg > 2:4487551/1‑150 (MQ=255) ttCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGcc > 2:3355812/1‑150 (MQ=255) gATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATCGGGAAGCCGTAGCAAAGTGCGCGTGTTGTTATGCCGGa > 2:1527815/1‑150 (MQ=255) aTTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGAt > 2:4588695/1‑150 (MQ=255) aTTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCGCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGAt < 2:575826/150‑1 (MQ=255) aaaaaaaaTAA‑‑TTAAATTTTTTGTTTTTAAATTTCTATATAACTAACACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCg < 1:720619/148‑1 (MQ=255) cAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTGTTTATGCCGGATGCgg > 1:4686599/1‑150 (MQ=255) aaaaTATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgt > 2:49611/1‑150 (MQ=255) aaaaTATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgt > 1:4484344/1‑150 (MQ=255) aaaTATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtg > 2:3555256/1‑150 (MQ=255) aaTATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtgt > 2:608361/1‑150 (MQ=255) atatAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAATGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGAGAGAGAGTGTTTAAGCCGGATGCGGTGTa > 1:3966065/1‑150 (MQ=255) atatAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTa > 2:3715755/1‑150 (MQ=255) atatAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTa > 1:1481591/1‑150 (MQ=255) ataA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTaaa > 2:1235013/1‑150 (MQ=255) taA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAAc > 2:1348289/1‑150 (MQ=255) taA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAAc > 1:1842344/1‑150 (MQ=255) aa‑‑ttaattTTTTTTTTTTAAAATATCTATATAACTATAACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACa < 1:2709170/150‑1 (MQ=255) tGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATa > 2:979339/1‑150 (MQ=255) gAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATAc < 2:407978/150‑1 (MQ=255) | TTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAA‑‑TGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATAC > CP009273/2170575‑2170873 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |