| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,547,821 | A→C | 7.3% | L241V (TTG→GTG) | eutR ← | eut operon transcriptional activator, AraC family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,547,821 | 0 | A | C | 7.3% | 672.5 / 2.3 | 308 | L241V (TTG→GTG) | eutR | eut operon transcriptional activator, AraC family |
| Reads supporting (aligned to +/- strand): ref base A (139/136); new base C (3/30); total (142/166) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.36e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 313 total aligned reads displayed.
TTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGGAGATTTTCCGGATTCTCGCAAAACGTCG > CP009273/2547672‑2547970 | ttCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAAt < 1:4462939/150‑1 (MQ=255) ttCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAAt < 1:2976346/150‑1 (MQ=255) ttCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAAt < 2:3806719/150‑1 (MQ=255) tCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATc < 1:1163053/150‑1 (MQ=255) tCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATc < 1:1814540/150‑1 (MQ=255) tCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATc > 2:1351052/1‑150 (MQ=255) tCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCAACGGTTCGGACATGTTTTCCAGCACATATTCAAGGTCGCGGGAAAGCAATc > 2:557492/1‑150 (MQ=255) cAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCg < 1:3616427/150‑1 (MQ=255) cAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCg > 2:4120215/1‑150 (MQ=255) ccACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACg < 2:1641891/150‑1 (MQ=255) ccACGCGTTCGGGCCAATGCATAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACg < 1:3586105/150‑1 (MQ=255) cACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACgg < 1:795649/150‑1 (MQ=255) cgcgTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTa > 2:1810272/1‑150 (MQ=255) gcgTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACGGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGTAAAGCAATCGACGTTaa < 2:3611963/150‑1 (MQ=255) gcgTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTaa > 2:1083960/1‑150 (MQ=255) tCGGGCCATTGCATAAAATAGCGTGAAACGCGTTTTGTTGCGTGCGGGGGCTGACATGCTGTTGATTACACAAATCCCGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATTTTCACGGGGGCGGTAAAGCAATCGACGGTAActct < 2:3209628/150‑1 (MQ=255) tCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAActct > 1:4837957/1‑150 (MQ=255) cGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATTTTTTCCAGCACATATTCCCGGGCGCGGGAACGCAATCGACGGTAACTCtg < 2:1059203/150‑1 (MQ=255) cAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGAc > 2:1166560/1‑150 (MQ=255) aaTGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACt > 2:701022/1‑150 (MQ=255) aTGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTg > 1:2252517/1‑150 (MQ=255) aTGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTg > 2:1288159/1‑150 (MQ=255) gCCTAAAATAGCGTGACACGCTTTTTGTCGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATTTTTTCCAGCACATATTCCCGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGAt < 2:4299081/150‑1 (MQ=255) aaaaTAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCtt > 1:3210301/1‑150 (MQ=255) aaaTAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCttt > 2:1573999/1‑150 (MQ=255) atcgCGTTAAACGGTTTTTGTTGGGTGGGGGGGCTTACATGCTGTTGATTACACAAATCCAGCACCTTCACGGTTTGGTAATTTTTTTCCAGCACATTTTCCCGGGCGGGGTAAAGCACTCGACGGTAACTCTGATGACTGATGCTTTcc < 2:4915568/147‑1 (MQ=255) aTAGCGTTAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCATTTGATTACACAAAACCAGCACCGTCACCGGTTCGGACATTTTTTCCAGCACATATTCACGGGCGCGGGAAACCACTCGACGGTAACTCTGATGACTGATGCTTTcc < 2:1015062/150‑1 (MQ=255) gCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTccgcc > 2:5112787/1‑150 (MQ=255) aacggcgTTTTGTTGCGGGCGGCGGCTGACTTGCTGTTGTTTACACAAATCCCCCACCGTCACCGGTTCGGACTTGTTTTCCAGCACATATTCCCGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCAc < 1:1605507/146‑1 (MQ=255) gctttttGTCGCGTGGGGCGGCTGACTTGCTGTTGATTACACAAATCCAGCACCGTCACGGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGTAAACCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCAtt < 2:1872504/147‑1 (MQ=255) cgTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTg > 2:3408343/1‑150 (MQ=255) ttttGTAGCGTGGGGGGGCTGACTTGCTGTTTATTACACAAATCCAGCACCGTCACCGGTTGGGACATGTTTTCCAGCAAATATTCACGGGCGCGGTAAAGAAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGt < 1:3905924/150‑1 (MQ=255) tttGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGtt > 2:1727208/1‑150 (MQ=255) ttGTAGCGTGCGGCGGCTGACAGGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCACTCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTg < 2:3504266/150‑1 (MQ=255) gTAGCGTGCGGCGGCTGACTTGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACTTGTTTTCCAGCACTTATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTgcg < 2:406138/150‑1 (MQ=255) gTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTgcg > 2:2329681/1‑150 (MQ=255) tAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACCTGTTTTCCAGCACATATTCCCGGGCGCGGGAAAGCAATCGACGGTCACTCTGATGACTGATGCTTTCCGCCGTCACCAGTGGTTgcgc > 2:742108/1‑150 (MQ=255) tAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCAGTGGTTgcgc > 1:3464461/1‑150 (MQ=255) cGTGCGGCGGCTTACATGCAGTTGATTACACAAAACCAGCCCCGTCACCGGTTCGTACATTTTTTCCAGCACATATTCACGGGCGCGGTAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGcttc < 2:1926292/150‑1 (MQ=255) gTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGcttct < 2:1482520/150‑1 (MQ=255) gcggcgGCTGACATGAAGTTTATTACACACATCCAGCACCGTCCCCGGTTCGGACATTTTTACCAGAACATTTTCACGGGCGCGGGAAAGAAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCttcttc < 2:4228530/150‑1 (MQ=255) cggcggCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTGGGAAATGTTTTCCAGCAAATATTCCCGGGCGCGGTAAAGCACTCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTcc < 1:222412/150‑1 (MQ=255) gcggcTGACATGCTGTTGATTACCCAAAGCCCGCACCGTCACGGGGTGGGACATGTTTTCCTGCACATTTTCCGGGGCGCGGGAAAGCACTCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAg < 1:5048090/150‑1 (MQ=255) cggcTGACATGCAGTTGATTACACAACTCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGc < 2:664188/150‑1 (MQ=255) ggcTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCa > 1:4559055/1‑150 (MQ=255) gACATGCTGTGTATTACACAAAGCCAGCACCTTCACCGGTTCGTACTTGTTTTCCAGCACATATTCACGGGCGCGGTAAACAAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGc < 2:4649952/150‑1 (MQ=255) aTGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGcccc > 2:3080775/1‑150 (MQ=255) tGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATTTTTTCCAGCAAATATTCACGGGCGCGGGAAAGAACTCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGccccc < 1:5178618/150‑1 (MQ=255) gCATTTGATTACACAAATCCAGCACCGTCACGGGTTCGGACATTTTTTCCAGCAAATATTCACGGGCGGGGTAATGAAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCa < 1:549884/150‑1 (MQ=255) gCAGTTGATTACACAAATCCAGCACCGTCACCGTTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCa < 2:4817700/150‑1 (MQ=255) atttGATTACAAAAATCCAGCACCGTCACCGTTTCGGACATGTTTTCCAGAACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCTCCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATc < 2:2581734/148‑1 (MQ=255) aGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATc < 2:4308210/150‑1 (MQ=255) aGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATc > 1:5269595/1‑150 (MQ=255) aGTTGATAACACAAATCCAGCCCCGTCCCCGGTTCGTACATGTTTTCCAGCCCATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATc < 2:2880466/150‑1 (MQ=255) gTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCg > 1:1446220/1‑150 (MQ=255) gTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCAAGCACATATTCCCGGGCGGGGTAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCg < 1:2505252/150‑1 (MQ=255) ttaTTACACAAATCCAGCACCGTCACGGGTTCGGACATGTTTTCCAGAAAATATTCCCGGGCGCGGTAAAGCACTCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGcc < 1:498299/148‑1 (MQ=255) tGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGcc > 1:3143571/1‑150 (MQ=255) tGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGcc > 2:5157620/1‑150 (MQ=255) gATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCa > 2:3124317/1‑150 (MQ=255) acaAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCa < 2:4387646/150‑1 (MQ=255) caAATCCAGCACCGTCACGGGTTCGGAAATGTTTTCCAGCAAATATTCACGGGCGCGGGAAAGCACTCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCaa < 1:4312958/150‑1 (MQ=255) ccAGCACCGACACCGGTTCGGACATGTTTTCCAGCACATATTCCCGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTAt < 2:4167410/150‑1 (MQ=255) cAGCACCGTCACCGGTTCGGACTTGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATc < 1:3738378/150‑1 (MQ=255) cACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCACTCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATcccc < 1:5112787/150‑1 (MQ=255) aCCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATccccc > 1:4907052/1‑150 (MQ=255) gTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGc > 2:4516586/1‑150 (MQ=255) cACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCAc < 1:4781779/150‑1 (MQ=255) actgtttCGGACTGTTTTTCCAGCACTTTTTCAGGGGCGCGGTAAATCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCAACATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACt < 1:1928189/145‑1 (MQ=255) aCCGGTTCGGACTTTTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACt < 2:2618736/150‑1 (MQ=255) aCCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACt < 2:593759/150‑1 (MQ=255) aCCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACt < 1:3998399/150‑1 (MQ=255) cGGTTCGGACTTGTTTTCCTGCACTTATTCCCGGGGGGGGTATAGAAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACttt < 1:317878/150‑1 (MQ=255) ggTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACtttt > 1:4139669/1‑150 (MQ=255) tagtaCATGTTTTCCAGCACATATTCAAGGGCGCGGGAAACAAATCTACGGTAACTCTGAAGACTGATGCTTTCCGCCGTCACCATTGGTTGAGATTCTTACAGCATGGCCCCAATATCCATTAGAAAATTATCCCCCAGCACTTTTCGc > 2:3410823/5‑150 (MQ=255) cGGACTTGTTTTCCAGCACATATTCCCGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCa < 1:1771122/150‑1 (MQ=255) cGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCa > 1:5020740/1‑150 (MQ=255) gACTTGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACt < 1:1286376/150‑1 (MQ=255) gACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACt > 1:3045361/1‑150 (MQ=255) aCATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTg > 1:1632939/1‑150 (MQ=255) aCATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTg > 1:665143/1‑150 (MQ=255) tagtttttCCTGCACATATTCAGGGGGGGGGGAATGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGc < 1:1038670/146‑1 (MQ=255) gTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAgg > 2:2567319/1‑150 (MQ=255) gTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAgg < 2:4581175/150‑1 (MQ=255) tttCCAGCACATATTCAGGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCt < 1:1090391/150‑1 (MQ=255) tttCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCt > 2:4707189/1‑150 (MQ=255) ttCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTg > 1:2422178/1‑150 (MQ=255) ccAGCACATATTCCCGGGCGCGGGAAAGCACTCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGAt < 1:384138/150‑1 (MQ=255) cAGCACATATTCACGGGCGCGGTAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATg < 2:2810827/150‑1 (MQ=255) acaTATTCCCGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGgaga < 1:291594/150‑1 (MQ=255) caTATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGGAGAt > 1:912662/1‑150 (MQ=255) tatccccGGGCGCGGGAAAGCACTCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGGAGAttt < 2:3896016/144‑1 (MQ=255) atTCACGGGCGCGGTAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGGAGAtttt < 1:2381017/150‑1 (MQ=255) cGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGGAGATTTTCCGGa > 2:1598226/1‑150 (MQ=255) gcgcGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGGAGATTTTCCGGATtc < 1:2026752/150‑1 (MQ=255) cgcgGTAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGGAGATTTTCCGGATtct < 1:2809433/150‑1 (MQ=255) gcgGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGGAGATTTTCCGGATtctc < 2:3735133/150‑1 (MQ=255) cgGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGGAGATTTTCCGGATTCTCg > 2:114220/1‑150 (MQ=255) gaaaTCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGGAGATTTTCCGGATTCTCGCAAAACg < 2:2082549/148‑1 (MQ=255) aaTCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGGAGATTTTCCGGATTCTCGCAAAACGTc < 2:2252517/150‑1 (MQ=255) | TTTCAGCCACGCGTTCGGGCCAATGCCTAAAATAGCGTGAAACGCGTTTTGTAGCGTGCGGCGGCTGACATGCAGTTGATTACACAAATCCAGCACCGTCACCGGTTCGGACATGTTTTCCAGCACATATTCACGGGCGCGGGAAAGCAATCGACGGTAACTCTGATGACTGATGCTTTCCGCCGTCACCATTGGTTGCGCTTCTTCCAGCATGGCCCCCATCGCCATTAGCAAATTATCCCCCAGCACTTTTCGCACTGCAGGCTGATGGAGATTTTCCGGATTCTCGCAAAACGTCG > CP009273/2547672‑2547970 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |