| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,742,155 | C→A | 5.9% | T8K (ACG→AAG) | yfjD → | UPF0053 family inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,742,155 | 0 | C | A | 5.9% | 1298.7 / 29.4 | 350 | T8K (ACG→AAG) | yfjD | UPF0053 family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (144/185); new base A (13/8); total (157/193) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.18e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.71e-01 | |||||||||||
Only 100 of 383 total aligned reads displayed.
ATGAAGGATGGCGTGGACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTCGAAAAATTGCTGCGTA > CP009273/2742006‑2742304 | aTGAAGGATGGCGTGGACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCtactactac > 1:4693071/1‑150 (MQ=255)aTGAAGGATGGCGTGGACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCtactactac < 1:2154644/150‑1 (MQ=255) tGAAGGATGGCGTGGACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACg < 2:4556907/150‑1 (MQ=255) tGAAGGATGGCGTGGACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACg < 2:3659251/150‑1 (MQ=255) aaGGATGGCGTGGACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGtt > 2:923681/1‑150 (MQ=255) aaGGATGGCGTGGACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGtt < 2:3311622/150‑1 (MQ=255) tGGCGTGGACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCa > 1:3658937/1‑150 (MQ=255) tGGACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCattatt > 2:5133484/1‑150 (MQ=255) ggACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTc < 2:4273677/150‑1 (MQ=255) gACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCt > 2:1304377/1‑150 (MQ=255) gACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCt < 1:4887704/150‑1 (MQ=255) gACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCt < 1:4187225/150‑1 (MQ=255) aCGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTg < 2:3158660/150‑1 (MQ=255) gccgcGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGat < 2:1173504/150‑1 (MQ=255) gccgcGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGat < 1:4988452/150‑1 (MQ=255) gccgaGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGat < 2:451416/150‑1 (MQ=255) ccgcGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGatc < 2:287013/150‑1 (MQ=255) gcgTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGatcat < 1:1083698/150‑1 (MQ=255) gtcgtcTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGAtcatca < 1:31327/150‑1 (MQ=255) gtcgtcTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTAAGTTGATCATTATTCTGAtcatca < 1:3989798/150‑1 (MQ=255) tcTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCAtggt > 2:1937901/1‑150 (MQ=255) tcTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCAtggt < 2:1821370/150‑1 (MQ=255) ggTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATggtggt < 1:1004131/150‑1 (MQ=255) ggTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATggtggt > 2:1729859/1‑150 (MQ=255) gTTTAACGTTGCGGGCGCGGTAATTCTGACATTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTc > 1:3922558/1‑150 (MQ=255) gTTTAACGTTGCGGGCGCGGTAATTCTGACATTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATACTGATCATCATGGTGGTc > 1:1330204/1‑150 (MQ=255) gTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTc < 1:3440051/150‑1 (MQ=255) gTTTAACGTAGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTc < 2:1998329/150‑1 (MQ=255) ttAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCAt < 1:5276532/150‑1 (MQ=255) tAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCAtt > 1:480098/1‑150 (MQ=255) aaCGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCAttt > 1:2282028/1‑150 (MQ=255) aCGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATAATCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTc < 1:3542821/150‑1 (MQ=255) tGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGcc < 2:4102759/150‑1 (MQ=255) cGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTa > 1:263042/1‑150 (MQ=255) cGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTa > 1:2375218/1‑150 (MQ=255) ggCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTAtt < 2:3373451/150‑1 (MQ=255) ggCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTAtt < 2:3796329/150‑1 (MQ=255) gcgcGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTAttt < 1:125946/150‑1 (MQ=255) aaTTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGACCACATTTCTACTACTACGTTGATCATTAGTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCggg > 1:3153731/1‑150 (MQ=255) aaTTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCggg > 2:1415433/1‑150 (MQ=255) tCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTcc < 2:1249081/150‑1 (MQ=255) acacTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTAAGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGaaa > 1:2856201/1‑150 (MQ=255) cacTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAAc < 2:2964499/150‑1 (MQ=255) tGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCgg > 2:2629497/1‑150 (MQ=255) cTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAatg > 2:2658604/1‑150 (MQ=255) cGGCAGCCGAATTGTCCAGCAGTTAAACAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGAcc < 1:2471820/150‑1 (MQ=255) ggCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGAccc > 2:3281872/1‑150 (MQ=255) cAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTAAGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTc > 2:52360/1‑150 (MQ=255) gAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCg > 1:1582237/1‑150 (MQ=255) aaTTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGc > 1:4576885/1‑150 (MQ=255) aaTTGTCCAGCAGTTAATCAGCTAAACCAAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGc > 2:64596/1‑150 (MQ=255) tGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTAt < 2:4914815/150‑1 (MQ=255) tGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTAt > 1:2417084/1‑150 (MQ=255) gTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATc < 2:2248035/150‑1 (MQ=255) gTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATc < 1:2193659/150‑1 (MQ=255) tCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCg < 1:697167/150‑1 (MQ=255) cagcagTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTAAGTTGATCATTATTCTGATCATAATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTc > 1:1691834/1‑150 (MQ=255) gcagTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTg < 2:480592/150‑1 (MQ=255) gcagTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTg < 2:5034040/150‑1 (MQ=255) cagTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGc > 2:2149171/1‑150 (MQ=255) cagTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGc < 1:2012510/150‑1 (MQ=255) agTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCg < 2:3787516/150‑1 (MQ=255) agTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTAAGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGACTGATGACCCTCAACCGCTCTCGTCTGCg > 1:4555671/1‑150 (MQ=255) aaTCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACat > 2:722160/1‑150 (MQ=255) tAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGa > 1:1120619/1‑150 (MQ=255) tAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATAATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGa > 2:832399/1‑150 (MQ=255) aaaCCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGaa > 2:2741231/1‑150 (MQ=255) aaaCCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGaa > 2:3043664/1‑150 (MQ=255) cccAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACa < 1:2045400/150‑1 (MQ=255) ccAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAg > 1:1522381/1‑150 (MQ=255) aGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAggg > 1:3384454/1‑150 (MQ=255) aGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAggg > 2:3984399/1‑150 (MQ=255) gAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGt > 1:4404459/1‑150 (MQ=255) aaaaGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTa < 2:4177912/150‑1 (MQ=255) aaGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAAt > 1:181349/1‑150 (MQ=255) aGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATc < 2:1528955/150‑1 (MQ=255) ggAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCg > 2:4216488/1‑150 (MQ=255) ggAGTTTCCCCTGGAACACATGTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTATGCGACATATGGCGAAACAGGGTAATCg < 2:4128239/150‑1 (MQ=255) ggAGTTTCCACTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCg < 1:3717753/150‑1 (MQ=255) aGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCt > 2:465122/1‑150 (MQ=255) ttCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCgg < 1:817261/150‑1 (MQ=255) ccTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGACTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCaa < 1:956227/150‑1 (MQ=255) cTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCaaa > 1:1451846/1‑150 (MQ=255) ggAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAAcg > 2:4418964/1‑150 (MQ=255) cacaTTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTc > 1:61199/1‑150 (MQ=255) cacaTTTCTACNACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTc > 1:2767330/1‑150 (MQ=255) acaTTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACCTATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTCg > 2:1643929/1‑150 (MQ=255) acaTTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTCg < 1:1847586/150‑1 (MQ=255) aTTTCGACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTCGaa > 1:2978733/1‑150 (MQ=255) cttctactacGTTGATCATTATTCTGATCATCATGGAGGTCATTTCAGCCAAATTTTCCGGGTCCGAAACCGGAATGATGACACTCAACCGCTATCTTCTGCGACCTATGGCGAAACAGGGTAAACGCTCGGCCAAACGCGTCGaaaaaa > 2:3525764/4‑149 (MQ=255) ctactactaCGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTCGAAAAAt < 2:3234843/150‑1 (MQ=255) ctactactaCGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTCGAAAAAt < 2:2452602/150‑1 (MQ=255) ctactactaCGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTCGAAAAAt < 2:4696623/150‑1 (MQ=255) actactacGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTCGAAAAATtg > 2:4761543/1‑150 (MQ=255) tactacGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTCGAAAAATtgct < 1:5133484/150‑1 (MQ=255) ctaaGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTCGAAAAATtgctgc > 2:3098394/1‑150 (MQ=255) tacGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTCGAAAAATTGCTGCg > 2:5081101/1‑150 (MQ=255) tacGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTCGAAAAATTGCTGCg < 1:908906/150‑1 (MQ=255) acGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTCGAAAAATTGCTGCGt > 1:3435264/1‑150 (MQ=255) cGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCTGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTCGAAAAATTGCTGCGTa > 2:1020788/1‑150 (MQ=255) | ATGAAGGATGGCGTGGACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAAACCCAGAAAAGGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTCGAAAAATTGCTGCGTA > CP009273/2742006‑2742304 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |