| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,765,064 | T→A | 7.8% | intergenic (+90/+297) | yfjT → / ← yfjU | CP4‑57 prophage; putative periplasmic protein/CP4‑57 prophage; conserved protein;Phage or Prophage Related |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,765,064 | 0 | T | A | 7.8% | 1074.9 / 61.9 | 360 | intergenic (+90/+297) | yfjT/yfjU | CP4‑57 prophage; putative periplasmic protein/CP4‑57 prophage; conserved protein;Phage or Prophage Related |
| Reads supporting (aligned to +/- strand): ref base T (144/187); new base A (12/16); total (157/203) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.36e-01 | |||||||||||
Only 100 of 362 total aligned reads displayed.
CCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGTTAAAACTCCTGATCACTTTTTGGTCTAAGCGATGGTTTCATATGATCAACCATTCTTGAT > CP009273/2764915‑2765213 | gATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACt < 2:1403862/150‑1 (MQ=255) gTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTc > 2:1670771/1‑150 (MQ=255) gTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTc > 2:656607/1‑150 (MQ=255) gTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTc < 2:3999494/150‑1 (MQ=255) ttCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCg > 2:2751238/1‑150 (MQ=255) ggAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAAc > 2:91070/1‑150 (MQ=255) ggAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAAc > 1:3091812/1‑150 (MQ=255) aaTGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGa > 1:2357403/1‑150 (MQ=255) aTGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGAt > 1:3285922/1‑150 (MQ=255) tGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTCGGCCACGTACTTTCGAACGATg > 2:4356145/1‑150 (MQ=255) tGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATg > 2:1697291/1‑150 (MQ=255) tGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATg > 2:2720110/1‑150 (MQ=255) cacaAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAg < 2:510566/150‑1 (MQ=255) cacaAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAg < 2:2679204/150‑1 (MQ=255) cacaAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGAACTTTCGAACGATGAg > 2:2002101/1‑150 (MQ=255) acaAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAgc < 1:3906557/150‑1 (MQ=255) aaaaGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAgcgc < 1:5242796/150‑1 (MQ=255) ggTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTg < 1:2667263/150‑1 (MQ=255) gTCCTGCCAACATTAGCGGACTGCACTAACGTCTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTgg > 2:4068262/1‑150 (MQ=255) ccTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTc < 1:2530290/150‑1 (MQ=255) ccTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTc < 1:785190/150‑1 (MQ=255) cTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCa < 2:4737180/150‑1 (MQ=255) tGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAg > 2:2517628/1‑150 (MQ=255) ccAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGtt > 1:4994602/1‑150 (MQ=255) ccAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGtt < 1:4582005/150‑1 (MQ=255) cAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATCACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATATCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGttt < 1:1969789/150‑1 (MQ=255) cAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGttt < 1:594335/150‑1 (MQ=255) aaCATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGtttt < 1:701188/150‑1 (MQ=255) aCATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGAGTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGttttt < 1:1051504/150‑1 (MQ=255) cATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGtttttt < 2:3711002/150‑1 (MQ=255) aTTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGttttttt < 1:3434018/150‑1 (MQ=255) tAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATACCCACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTACTCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCa < 2:2334208/150‑1 (MQ=255) tAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCa < 2:1619373/150‑1 (MQ=255) ggACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGata > 2:1895050/1‑150 (MQ=255) gACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGatat < 1:5116405/150‑1 (MQ=255) cTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATACCAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGatatat < 2:5055294/150‑1 (MQ=255) cTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGatatat < 2:319885/150‑1 (MQ=255) cTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGatatat < 2:2408799/150‑1 (MQ=255) cTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGatatat < 2:2347398/150‑1 (MQ=255) cTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGatatat < 1:1419131/150‑1 (MQ=255) tGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATAtt < 1:1331397/150‑1 (MQ=255) tGCACTAACGACTGACGGCTGCGCCTTCCCTACCAAAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATAtt > 1:2219186/1‑150 (MQ=255) gCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATAttt < 1:4137196/150‑1 (MQ=255) gCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATAttt < 1:1664438/150‑1 (MQ=255) gCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATAttt < 1:3153222/150‑1 (MQ=255) aCTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTAt > 2:4684661/1‑150 (MQ=255) aCTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGAGTGCCTCCGGCGGTCGGGGGTTTCTTTGTTCTCCTGCATCTCCAGAGGTAGGCCACGTACGTTCGAACGATGAGCGCAGGGGTCAGTTTTTTTCAGAGATAtttct > 2:2926133/1‑148 (MQ=255) cTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATc < 1:3565609/150‑1 (MQ=255) tAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCt < 2:4906236/150‑1 (MQ=255) tAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGAACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATAATTATCt > 2:762257/1‑150 (MQ=255) aaCGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCtt < 2:3901194/150‑1 (MQ=255) aCGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCtgt > 2:3866469/1‑148 (MQ=255) gACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCttttt < 1:1670754/150‑1 (MQ=255) aCTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCtttttt < 2:4476830/150‑1 (MQ=255) cTGACGGCTGCGCCTTCCCTACCATAACAACCCTGAGTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCttttttt < 1:2437001/150‑1 (MQ=255) tGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTg < 2:1007331/150‑1 (MQ=255) ggCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTg < 2:2823287/150‑1 (MQ=255) ggCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGAGATATTTATCTTTTTTTGGCTg > 1:3475140/1‑150 (MQ=255) cTGCGCCTTCCCTACCATAACAACCCTGAGTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTa < 1:3760153/150‑1 (MQ=255) tGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTATCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGTGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGtta > 1:2297677/1‑148 (MQ=255) cgcCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGc < 1:282861/150‑1 (MQ=255) ccTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTc < 1:3871339/150‑1 (MQ=255) cTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTcc > 1:1799892/1‑150 (MQ=255) ttCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCg > 1:819480/1‑150 (MQ=255) cccTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGAACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCt > 1:3938374/1‑150 (MQ=255) ccATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAg < 1:1222391/150‑1 (MQ=255) cATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAgc > 1:1990562/1‑150 (MQ=255) aTAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAgcg > 2:2164193/1‑150 (MQ=255) caacCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAgg < 1:1547491/150‑1 (MQ=255) aacCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGc > 1:273488/1‑150 (MQ=255) acCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCt < 2:4656745/150‑1 (MQ=255) tGATTGCCTCCGGCGGTC‑GGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGtt < 2:1827547/150‑1 (MQ=255) gATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGtt < 1:4502852/150‑1 (MQ=255) aTTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGTTa < 1:2091947/150‑1 (MQ=255) gCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGTTaaaa > 1:368950/1‑150 (MQ=255) ggcggTCGGGGGTTTCTTTTTTCTCCTGACTCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGTTAAAACTCCTg < 1:420087/150‑1 (MQ=255) ggTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGTTAAAACTCCTGATc < 2:3130229/150‑1 (MQ=255) gTCGGGGGTTTCTTTTTTCTACTTAAACTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGTTAAAACTCCTGAtaa > 1:4343843/1‑148 (MQ=255) cGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGTTAAAACTCCTGATCACt > 2:3353144/1‑150 (MQ=255) gggggTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGAACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGTTAAAACTCCTGATCACtt < 2:4291890/150‑1 (MQ=255) ggggTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGAACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGTTAAAACTCCTGATCACttt < 2:3488058/150‑1 (MQ=255) ttCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGTTAAAACTCCTGATCACTTTTTGGt > 2:3248085/1‑150 (MQ=255) cTTTTTTCTCCTTACTCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGTTAAAACTCCTGATCACTTTTTGGTCt < 2:4792189/150‑1 (MQ=255) ttttttCTCCTTAATCTCCAGAGGTAGGCCACGAACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGTTAAAACTCCTGATCACTTTTTGGTCTa < 1:4559869/150‑1 (MQ=255) tttttCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGTTAAAACTCCTGATCACTTTTTGGTCTaa < 1:4068262/150‑1 (MQ=255) ttttCTCCTTACTCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGTTAAAACTCCTGATCACTTTTTGGTCTAAg < 1:14901/150‑1 (MQ=255) ttttCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGTTAAAACTCCTGATCACTTTTTGGTCTAAg < 1:4892222/150‑1 (MQ=255) ttttCTCCTTAATCTCCAGAGGTAGGCCACGAACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGTTAAAACTCCTGATCACTTTTTGGTCTAAg < 1:1132323/150‑1 (MQ=255) tAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGTTAAAACTCCTGATCACTTTTTGGTCTAAGCGATGGttt < 2:1750479/150‑1 (MQ=255) attctcCAGAGGTTGGCCACGTACTTTCTAACTTTGAGCGCTTTGGTCAGTTTTTTTCAGATATATTTCTCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGTTAAAACTCCTGATCACTTTTTGGTCTAAGCGATGGtttg < 2:3637052/148‑2 (MQ=255) tctcCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGTTAAAACTCCTGATCACTTTTTGGTCTAAGCGATGGTTTCat > 2:1265446/1‑150 (MQ=255) ctcCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGTTAAAACTCCTGATCACTTTTTGGTCTAAGCGATGGTTTCata > 2:1160448/1‑150 (MQ=255) ctcCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTAAGATATATTTAACTTTTATAGGCTTTAAGATCCGCTGTGAGCGCAGTCAGATTTAAAACAACTGATCACTATTATGTCTAACCGATGGTTTCata > 1:3593951/1‑150 (MQ=255) agagGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGTTAAAACTCCTGATCACTTTTTGGTCTAAGCGATGGTTTCATATGAt < 1:294978/150‑1 (MQ=255) gagGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGTTAAAACTCCTGATCACTTTTTGGTCTAAGCGATGGTTTCATATGATc < 1:3242456/150‑1 (MQ=255) gagGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGTTAAAACTCCTGATCACTTTTTGGTCTAAGCGATGGTTTCATATGATc > 1:5302579/1‑150 (MQ=255) agGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGTTAAAACTCCTGATCACTTTTTGGTCTCAGCGATGGTTTCATATGATCa > 2:2596348/1‑150 (MQ=255) cACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGTTAAAACTCCTGATCACTTTTTGGTCTAAGCGATGGTTTCATATGATCAACCATTCt > 1:893524/1‑150 (MQ=255) aCGTAATTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGTTAAAACTCCTGATCACTTTTTGGTCTAAGCGATGGTTTCATATGATCAACCATTCtt < 2:1036436/150‑1 (MQ=255) gTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGTTAAAACTCCTGATCACTTTTTGGTCTAAGCGATGGTTTCATATGATCAACCATTCTTGa > 2:4217749/1‑150 (MQ=255) | CCTGATGTTCGGAATGCACAAAAGGTCCTGCCAACATTAGCGGACTGCACTAACGACTGACGGCTGCGCCTTCCCTACCATAACAACCCTGATTGCCTCCGGCGGTCGGGGGTTTCTTTTTTCTCCTTAATCTCCAGAGGTAGGCCACGTACTTTCGAACGATGAGCGCAGTGGTCAGTTTTTTTCAGATATATTTATCTTTTTTTGGCTGTAAGCTCCGCTGTGAGCGCAGGCTGTGTTAAAACTCCTGATCACTTTTTGGTCTAAGCGATGGTTTCATATGATCAACCATTCTTGAT > CP009273/2764915‑2765213 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |