| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,798,195 | A→T | 100% | K8* (AAA→TAA) | proV → | glycine betaine transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,798,195 | 0 | A | T | 99.7% | 1115.7 / ‑4.9 | 336 | K8* (AAA→TAA) | proV | glycine betaine transporter subunit |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base T (168/167); total (168/168) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 342 total aligned reads displayed.
ATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATA > CP009273/2798047‑2798341 | atatTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAAt < 2:4265019/150‑1 (MQ=255) tatTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCATTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATc < 2:4034963/150‑1 (MQ=255) tatTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATc > 1:4244180/1‑150 (MQ=255) tatTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATc > 1:2506211/1‑150 (MQ=255) tCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCttt < 2:4336924/150‑1 (MQ=255) cATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTta < 1:3310627/150‑1 (MQ=255) aTGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATTGCAATTAAATTAGAAATTTAAAATCTTtat < 2:4114264/150‑1 (MQ=255) aTGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTtat < 1:2840753/150‑1 (MQ=255) aTGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTtat < 2:121061/150‑1 (MQ=255) tGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTtata > 2:5008622/1‑150 (MQ=255) gCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATaa < 1:5038237/150‑1 (MQ=255) ccACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATaaa < 2:1074204/150‑1 (MQ=255) cacaTTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATaaaa > 2:420747/1‑150 (MQ=255) caTTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAata < 1:2749293/150‑1 (MQ=255) aTTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAatat > 1:4017780/1‑150 (MQ=255) aTTTGACATCAGTGGTTTCCTCATATTCTAATTATGTTATGGTATAAAAAAGTGACTATTTACATTGGGTAATATATCGACATATAAAAATAAAGGAATCTTTCTATTGCATGTCAATTAAATTAGAAATTTAAAATCTTTATAAAatat < 1:3026269/150‑1 (MQ=255) ttGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATAttt < 1:4724033/150‑1 (MQ=255) gCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTgg > 2:3754465/1‑150 (MQ=255) cATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCg > 2:5276915/1‑150 (MQ=255) cATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCg < 1:4382373/150‑1 (MQ=255) cAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGc < 1:4273438/150‑1 (MQ=255) gggTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATc < 1:5019408/150‑1 (MQ=255) gggTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATc < 2:2309798/150‑1 (MQ=255) ggTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATcc > 2:4925802/1‑150 (MQ=255) ggTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATcc < 1:4181875/150‑1 (MQ=255) gTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCca < 2:74622/150‑1 (MQ=255) gTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCca < 1:5280084/150‑1 (MQ=255) ttGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCTTTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCcac < 2:567886/150‑1 (MQ=255) ttGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCcac > 1:3326743/1‑150 (MQ=255) cTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACagcg < 2:2702977/150‑1 (MQ=255) aTTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGt > 1:1763074/1‑150 (MQ=255) ttCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGtt < 1:2360127/150‑1 (MQ=255) ctcAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCa > 1:4845308/1‑150 (MQ=255) cAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCaaa > 1:3453163/1‑150 (MQ=255) aGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAat > 1:4684319/1‑150 (MQ=255) gTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAata < 2:3864305/150‑1 (MQ=255) tATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAatat < 1:4039713/150‑1 (MQ=255) aTGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATAAATCGACATAGACAAATAAAGGAATCTTTCTATTGCTTGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAagata > 2:4548818/1‑150 (MQ=255) gTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATc < 1:1657689/150‑1 (MQ=255) tAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAGAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGa > 2:29887/1‑150 (MQ=255) tAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGa < 2:3992993/150‑1 (MQ=255) aGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGaa > 1:2982472/1‑150 (MQ=255) tAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAg < 1:256255/150‑1 (MQ=255) aGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAgg > 2:2325875/1‑150 (MQ=255) gAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGa > 2:4097922/1‑150 (MQ=255) aaaGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACttt < 2:2194125/150‑1 (MQ=255) gTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCaa < 2:2178463/150‑1 (MQ=255) tATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGaa > 1:4522139/1‑150 (MQ=255) tATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGaa > 2:2086274/1‑150 (MQ=255) tATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGaa > 1:5188887/1‑150 (MQ=255) aTTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAAc < 2:3350085/150‑1 (MQ=255) aTTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAAc < 2:3608663/150‑1 (MQ=255) aTTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAAc < 2:4876786/150‑1 (MQ=255) tttCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACa < 1:998614/150‑1 (MQ=255) tttCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACa > 1:3685884/1‑150 (MQ=255) ttCCATTGTGTAATATATCGACATAGACAAATAAATGAATCTTTCTATTTCATGGCAATTAAATTAGTAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATTTATCGAAAAAGGAATTTCAAATTAACaa > 2:3688431/1‑150 (MQ=255) ttCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGTGTTCAAATATATCGAACAAGGACTTTCAAAAGAACaa > 2:1905889/1‑150 (MQ=255) aTTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTc < 1:2039080/150‑1 (MQ=255) ttGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCt > 1:1615215/1‑150 (MQ=255) tGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTg > 1:2272179/1‑150 (MQ=255) gggTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTgg > 1:2270168/1‑150 (MQ=255) aaTATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGaaaa > 2:3551697/1‑150 (MQ=255) atCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTg > 1:245243/1‑150 (MQ=255) tCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTgg < 1:10230/150‑1 (MQ=255) tCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTgg < 2:2784544/150‑1 (MQ=255) gACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGc < 1:4341551/150‑1 (MQ=255) aTAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTAt > 1:3550394/1‑150 (MQ=255) tAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATc < 2:4704269/150‑1 (MQ=255) aGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCg < 2:3237260/150‑1 (MQ=255) gACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGc < 1:1527158/150‑1 (MQ=255) gACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATATGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGc > 1:729483/1‑150 (MQ=255) aCAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCt > 2:2444594/1‑150 (MQ=255) aCAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCt > 1:3877162/1‑150 (MQ=255) tAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCg > 1:879224/1‑150 (MQ=255) aaaGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGt > 2:3197282/1‑150 (MQ=255) aaaGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGt > 1:2857015/1‑150 (MQ=255) aaaGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGt < 1:552568/150‑1 (MQ=255) aaGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTa > 1:1939133/1‑150 (MQ=255) aaGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTa < 2:1284461/150‑1 (MQ=255) ggAATCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTaaa > 2:2601127/1‑150 (MQ=255) aaTCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAg > 2:5160093/1‑150 (MQ=255) aaTCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAg > 2:1435356/1‑150 (MQ=255) tatttATATTGAATGTCAATTAAATTAGAAATTTAAAATATTTATAAAATATTTGGCGAGCATCCACAGCGAGAGTTAAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGAc < 1:1392082/148‑1 (MQ=255) tCTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGAc < 1:1437138/150‑1 (MQ=255) cTTTCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACg > 1:1108183/1‑150 (MQ=255) tCTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCa > 2:2545176/1‑150 (MQ=255) cTATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAg > 2:2901849/1‑150 (MQ=255) tATTGCATGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGt > 2:1684896/1‑150 (MQ=255) aTGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGcc > 2:1477823/1‑150 (MQ=255) tGGCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCa > 1:3826904/1‑150 (MQ=255) ggCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCAt > 1:4447855/1‑150 (MQ=255) gCAATTAAATTAGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCAtt > 2:3321386/1‑150 (MQ=255) aaattaGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTgaagaa > 1:587196/1‑150 (MQ=255) aaattaGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTgaagaa > 1:2320633/1‑150 (MQ=255) attaGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAgg < 2:313698/150‑1 (MQ=255) ttaGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGc < 2:2147220/150‑1 (MQ=255) aGAAATTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCga > 2:3015564/1‑150 (MQ=255) aaaTTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGTCgaga > 1:4989827/1‑150 (MQ=255) aaTTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGat < 1:420747/150‑1 (MQ=255) aTTTAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGata < 2:240496/150‑1 (MQ=255) | ATCAATATTCATGCCACATTTGCCATCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATA > CP009273/2798047‑2798341 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |