| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 375,478 | (G)10→11 | intergenic (‑141/+47) | frmR ← / ← yaiO | regulator protein that represses frmRAB operon/outer membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 375,468 | 1 | . | G | 84.5% | 317.8 / 56.3 | 97 | intergenic (‑131/+57) | frmR/yaiO | regulator protein that represses frmRAB operon/outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base . (12/3); new base G (79/3); total (91/6) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.56e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 114 total aligned reads displayed.
CTTCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGCCGTCAGCCCGAG > CP009273/375319‑375617 | cttcCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGaaa < 2:3489314/150‑1 (MQ=255) ttcCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑g < 1:3744309/150‑1 (MQ=255) ttcCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑g > 1:2631708/1‑150 (MQ=255) ttcCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑g < 1:1483265/150‑1 (MQ=255) ttcCGGAGAACTGGGCATTTCGCACCTCATCATCAGCATGCAATAAACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATATATCCGGTGACTGTGGTCGGAAAACAAAGAGGATA‑‑g > 2:3332939/1‑150 (MQ=255) tcCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑gg < 2:2366891/150‑1 (MQ=255) tcCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAAGATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑gg < 2:2366910/150‑1 (MQ=255) cGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑gg‑gg < 1:1985775/150‑1 (MQ=255) cGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑gg‑gg < 1:2834471/150‑1 (MQ=255) cGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑gg‑gg < 1:929219/150‑1 (MQ=255) cGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑gg‑gg < 2:1195677/150‑1 (MQ=255) aGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAC‑‑gg‑ggggg > 2:3044346/1‑150 (MQ=255) aGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑gg‑ggggg < 1:828314/150‑1 (MQ=255) tGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGACA‑‑gg‑gggggggggc > 2:1898806/1‑148 (MQ=255) aTTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATc > 2:3556721/1‑150 (MQ=255) cGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCa > 2:196033/1‑150 (MQ=255) gCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAAGGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGACTGTGGTCGGAAAACAACGAGGAAA‑‑GG‑GGGGGGGG‑CTAATCGGCAgg < 2:2977705/150‑1 (MQ=255) caccacATCATCTGCATGCAATATACTACCGGGGGGTATTCTAAATGACAATGCATACCCCCCTATAGTATATAACACGGTTGAATAAAATTTATCCGGTGAATGTGGTCTGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAgg < 2:194601/150‑1 (MQ=255) aCCTCATCATCTGCATGCAATATACTATTTTGGGGTATTCTATATGTCAATGCATACACACCTATTTTATATAACACTGGAGAATAAAATTTATCCTGTGAATGTGGTCTTAAACAAACGAGGAAA‑‑GG‑TGGTGGGT‑CTAATCGGCAGGGa < 2:3542428/150‑1 (MQ=255) ccTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GG‑GGGGGGGG‑CTAATCGGCAGGGaa > 1:407003/1‑150 (MQ=255) cTCATCATCAGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACAGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGaa > 2:910454/1‑150 (MQ=255) taataaccTGCTTGAAATATACTATCGGGGGTTATTCAATATGCCAAGGCAGACCCCCCTTTAGTATAAACCCCTGGAGAATAAAATTTAGCCGGTGAAGGGGGCCGCAAAACAAACAGCAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAg < 2:1330526/143‑1 (MQ=255) catcTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAATGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGgccg > 2:459488/1‑150 (MQ=255) catcTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGgccg > 2:395799/1‑150 (MQ=255) catcTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGgccg > 2:901038/1‑150 (MQ=255) catcTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATAGGGAGGGAAGgccg > 2:395589/1‑150 (MQ=255) catcTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGgccgc > 1:1224073/1‑150 (MQ=255) tgcatgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGcccc > 1:1017374/1‑150 (MQ=255) tgcatgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATAGGCAGGGAAGGCGGcccc > 1:1017363/1‑150 (MQ=255) gcatgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCg > 1:2509700/1‑150 (MQ=255) atgcaATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGa > 2:2406849/1‑150 (MQ=255) tgcaATATACCCTAGGGGTGTATTCTCTATGTCACTGCATACCCCCCTTTAGAATATAACACTGGAGAATAAAATTTCGCCGGTGAATGTGGTCGGAAAACACCGCGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGAt < 2:3332701/150‑1 (MQ=255) aaTATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCAGAAGGGAAGGACGCCCCGGATAgc > 1:2907783/1‑150 (MQ=255) atatACTACAGGCGTGTATTCTCTATGACACTGCATACCCCCCTCTAGTATATCACACGGCACAACACCATCTCCCCGGTCACTGGCGCCCCACAACACCCAGCACA‑‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAgcgg < 2:1440720/150‑1 (MQ=255) aCTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GG‑GGGGGGGGACTAATCGGCAGGGAAGGCCGCCCCGGATCgcgggcg > 2:3406991/1‑150 (MQ=255) cTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggcgg > 1:1097859/1‑150 (MQ=255) cTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggcgg > 1:3640200/1‑150 (MQ=255) cTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggcgg > 1:941268/1‑150 (MQ=255) tataGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGggcggc > 1:3373793/1‑150 (MQ=255) tataGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGggcggc > 1:3373732/1‑150 (MQ=255) tataGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGggcggc > 1:1063261/1‑150 (MQ=255) ataGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAAACGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCa > 2:262081/1‑150 (MQ=255) aGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGaa > 2:887927/1‑150 (MQ=255) aTTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCa > 1:44697/1‑150 (MQ=255) aTTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCa > 1:1828648/1‑150 (MQ=255) tCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGa > 2:546074/1‑150 (MQ=255) atGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTc > 2:3741368/1‑150 (MQ=255) tCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAg > 1:2477680/1‑150 (MQ=255) cAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGACTCAGAATTTCCAgg > 2:3390209/1‑150 (MQ=255) cAATGCAAACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAgg > 2:849918/1‑150 (MQ=255) aaTGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAgg > 1:1299150/1‑150 (MQ=255) aaTGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGt > 1:2807842/1‑150 (MQ=255) aaTGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGt > 1:2105428/1‑150 (MQ=255) aaTGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGAAAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGt > 1:2106898/1‑150 (MQ=255) aTGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCa > 1:1181176/1‑150 (MQ=255) tGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCa > 2:2589277/1‑150 (MQ=255) cATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGa > 1:879322/1‑150 (MQ=255) cATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGAc > 1:3153208/1‑150 (MQ=255) aCCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACgg > 2:1906214/1‑150 (MQ=255) cccctcTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGTGGGGGGGG‑CTAATCGGCGGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACggg > 2:1370104/1‑150 (MQ=255) cccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTg > 1:2355048/1‑150 (MQ=255) cccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTg > 2:2590798/1‑150 (MQ=255) cccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGc > 1:1716226/1‑150 (MQ=255) ccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑GCAATAGGGCGGGAACGCCCCCCCGGATAGCCGGGGGCCCAAGGGAGCAGAAATTGCCGGTCACACGggcggc > 2:2355678/1‑150 (MQ=255) ccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGc > 2:450088/1‑150 (MQ=255) ccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGc > 2:2714174/1‑150 (MQ=255) ccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGc > 1:950496/1‑150 (MQ=255) ccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGc > 1:950083/1‑150 (MQ=255) aGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGtt > 2:1618144/1‑150 (MQ=255) aGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGtt > 1:2916712/1‑150 (MQ=255) tatataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGc > 1:1480024/1‑150 (MQ=255) atataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCa > 2:1870622/1‑150 (MQ=255) tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAg > 2:165274/1‑150 (MQ=255) ataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGa > 1:1191082/1‑150 (MQ=255) taACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGAc > 2:1328812/1‑150 (MQ=255) aaCACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAAACAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGAcc > 1:3478501/1‑150 (MQ=255) aaCACTGGAGAATAAAATTTATCCGGTGAATGTGGCCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGAcc > 1:3121117/1‑150 (MQ=255) cTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATAGGGAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTACAGGTAAAAAGGGCTGCAAGTTTCAGACCGGTa > 2:3668963/1‑150 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCACGTTGCAGACCGTTaa > 2:2697076/1‑150 (MQ=255) tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTaa > 2:2676136/1‑150 (MQ=255) aTAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCATAATTTACAGGTCAAACGGGCTGCAAGTTGCAGAACGTTAAAatcat > 1:1451656/1‑150 (MQ=255) aaaTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCgg > 1:3533190/1‑150 (MQ=255) aaaTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCgg > 1:1187906/1‑150 (MQ=255) aaTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGt > 1:433104/1‑150 (MQ=255) tttATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTg > 1:2754650/1‑150 (MQ=255) ttATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CAAAACGCCAGGGAAGGCCCCCCCGAAAAGCGGGGGGCAAAAGAAAACAAAATTACCAGGACAAACGGCCGCCAAGTTCCAACCCGTACAAAACAACGGTTgg > 1:2751432/1‑150 (MQ=255) cGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGgtgt > 2:3789513/1‑150 (MQ=255) cGGTGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGACAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGgtgt > 2:2399969/1‑150 (MQ=255) tGAATGTGGTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGt > 2:2973876/1‑150 (MQ=255) gAATGTGGTCGGAAAACAAAGAGGAAA‑‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTAc > 2:1666000/1‑150 (MQ=255) ggTCGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATACGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCacac > 2:794679/1‑150 (MQ=255) cGGAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CAAAACGGCAGGGAAGGCCCCCCCGGAAAGCGGGCGGCAGAAGGAAACAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGAACCACACttt > 2:1612037/1‑150 (MQ=255) ggAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAAACAGAATTACCAGGTCAGACGGGCTGCAAGTTGAATACCGTTAAAAACATCGGTTGGGGTGTCGTACCACACTTTa > 2:634786/1‑150 (MQ=255) gAAAACAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTAc > 1:2204656/1‑150 (MQ=255) aaaaCAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTAcc > 2:2045300/1‑150 (MQ=255) aaaaCAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTAcc > 1:291355/1‑150 (MQ=255) cAAAGAGGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGcc > 1:496104/1‑150 (MQ=255) gagGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGCCGTCa > 1:3089419/1‑150 (MQ=255) gagGAAAG‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGCCGTCa > 1:3088490/1‑150 (MQ=255) a‑‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGCCGTCAGCCCgag > 2:1461725/1‑150 (MQ=255) | CTTCCGGAGTACTGGGCATTTCGCACCTCATCATCTGCATGCAATATACTATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GG‑GGGGGGGG‑CTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGCCGTCAGCCCGAG > CP009273/375319‑375617 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |