Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009273 3,842,467 C→A G344W (GGG→TGG)  uhpB ← sensory histidine kinase in two‑component regulatory sytem with UhpA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092733,842,4670CA100.0% 768.6 / NA 228G344W (GGG→TGG) uhpBsensory histidine kinase in two‑component regulatory sytem with UhpA
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (102/126);  total (102/126)

Only 100 of 228 total aligned reads displayed.

TACCGCGCCCTTCCAGCTCCATTTCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGCTCTCTTCGGTTTCCAGCAACCGTT  >  CP009273/3842320‑3842613
                                                                                                                                                   |                                                                                                                                                  
 aCCGCGCCCTTCCAGCTCCATTTCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGct                                                                                                                                                 >  1:694636/1‑150 (MQ=255)
   cgcgCCCTTCCAGCTCCATTTCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGctct                                                                                                                                               <  2:344542/150‑1 (MQ=255)
    gcgcCCTTCCAGCTCCATTTCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTg                                                                                                                                              <  2:2809151/150‑1 (MQ=255)
     cgcCCTTCCAGCTCCATTTCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGc                                                                                                                                             >  2:1245719/1‑150 (MQ=255)
      gcCCTTCCAGCTCCATTTCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCt                                                                                                                                            >  1:1476197/1‑150 (MQ=255)
       cccTTCCAGCTCCATTTCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCtt                                                                                                                                           <  2:2441188/150‑1 (MQ=255)
          ttCCAGCTCCATTTCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCAc                                                                                                                                        >  1:2541405/1‑150 (MQ=255)
             cAGCTCCATTTCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCt                                                                                                                                     <  1:1071382/150‑1 (MQ=255)
              aGCTCCATTTCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTg                                                                                                                                    <  1:1763644/150‑1 (MQ=255)
                   cATTTCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGtt                                                                                                                               >  1:784615/1‑150 (MQ=255)
                    aTTTCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTa                                                                                                                              <  2:49927/150‑1 (MQ=255)
                    aTTTCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTa                                                                                                                              <  1:2849103/150‑1 (MQ=255)
                      gtCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATc                                                                                                                            <  2:1689524/149‑1 (MQ=255)
                       tCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCt                                                                                                                           <  1:3225249/150‑1 (MQ=255)
                       tCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCt                                                                                                                           <  1:2430275/150‑1 (MQ=255)
                        cccGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTg                                                                                                                          >  1:938243/1‑150 (MQ=255)
                          cGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTgcc                                                                                                                        <  2:2444057/150‑1 (MQ=255)
                          cGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTgcc                                                                                                                        <  2:2225750/150‑1 (MQ=255)
                          cGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTgcc                                                                                                                        <  1:1988399/150‑1 (MQ=255)
                          cGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTgcc                                                                                                                        <  2:3639531/150‑1 (MQ=255)
                             aTCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTgccgcc                                                                                                                     >  2:833609/1‑150 (MQ=255)
                             aTCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCACGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTgccgcc                                                                                                                     >  2:2588467/1‑150 (MQ=255)
                              tCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCa                                                                                                                    <  2:2876613/150‑1 (MQ=255)
                               cAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAg                                                                                                                   >  1:45372/1‑150 (MQ=255)
                               cAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAg                                                                                                                   <  1:3423272/150‑1 (MQ=255)
                                  tGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCg                                                                                                                >  2:753452/1‑150 (MQ=255)
                                   gAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGc                                                                                                               >  2:1698297/1‑150 (MQ=255)
                                     gCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTg                                                                                                             <  2:3007977/150‑1 (MQ=255)
                                     gCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTg                                                                                                             <  2:3476452/150‑1 (MQ=255)
                                       ggATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGaa                                                                                                           <  2:1897480/150‑1 (MQ=255)
                                            gCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATg                                                                                                      <  1:1245719/150‑1 (MQ=255)
                                             ccTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGc                                                                                                     >  1:1167714/1‑150 (MQ=255)
                                                    cAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTg                                                                                              >  2:1914195/1‑150 (MQ=255)
                                                    cAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTg                                                                                              <  2:653891/150‑1 (MQ=255)
                                                    cAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTCCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTg                                                                                              >  2:2774218/1‑150 (MQ=255)
                                                     aGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGa                                                                                             >  1:2599377/1‑150 (MQ=255)
                                                     aGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGa                                                                                             >  2:881365/1‑150 (MQ=255)
                                                       ggTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGt                                                                                           >  1:3206706/1‑150 (MQ=255)
                                                       ggTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGt                                                                                           <  2:1478646/150‑1 (MQ=255)
                                                        gTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTa                                                                                          >  1:2243710/1‑150 (MQ=255)
                                                        gTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTa                                                                                          <  2:1613046/150‑1 (MQ=255)
                                                          gagaTCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACg                                                                                        >  1:1559137/1‑150 (MQ=255)
                                                             atcatcCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAAt                                                                                     <  2:269034/150‑1 (MQ=255)
                                                              tcatcCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATa                                                                                    <  2:674277/150‑1 (MQ=255)
                                                               catcCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAg                                                                                   >  1:3390264/1‑150 (MQ=255)
                                                                atcCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGc                                                                                  >  1:601111/1‑150 (MQ=255)
                                                                atcCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGc                                                                                  >  2:1606405/1‑150 (MQ=255)
                                                                  ccAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAg                                                                                <  1:3528864/150‑1 (MQ=255)
                                                                    aaCTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTg                                                                              <  2:3423078/150‑1 (MQ=255)
                                                                    aaCTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTg                                                                              >  2:1092706/1‑150 (MQ=255)
                                                                     aCTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGa                                                                             >  2:3376694/1‑150 (MQ=255)
                                                                      cTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGAt                                                                            >  2:3006476/1‑150 (MQ=255)
                                                                      cTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGAt                                                                            <  1:127609/150‑1 (MQ=255)
                                                                       tGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATg                                                                           <  2:3752491/150‑1 (MQ=255)
                                                                        ggCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATgg                                                                          <  2:1450502/150‑1 (MQ=255)
                                                                           gcgGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCt                                                                       <  2:1859113/150‑1 (MQ=255)
                                                                               aCGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGAcc                                                                   <  2:380524/150‑1 (MQ=255)
                                                                                cGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCg                                                                  <  2:1402777/150‑1 (MQ=255)
                                                                                    aCCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGatat                                                              >  1:1620075/1‑150 (MQ=255)
                                                                                      cGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATatca                                                            >  1:2379484/1‑150 (MQ=255)
                                                                                        aCCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATatcatc                                                          <  1:2874749/150‑1 (MQ=255)
                                                                                        aCCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATatcatc                                                          >  1:3040947/1‑150 (MQ=255)
                                                                                         cccAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATAtcatca                                                         <  1:177105/150‑1 (MQ=255)
                                                                                         cccAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATAtcatca                                                         <  1:2080861/150‑1 (MQ=255)
                                                                                         cccAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATAtcatca                                                         <  2:1199380/150‑1 (MQ=255)
                                                                                           caacaaACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATg                                                       >  2:2475077/1‑150 (MQ=255)
                                                                                            aacaaACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGc                                                      >  2:1351951/1‑150 (MQ=255)
                                                                                            aacaaACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGc                                                      <  2:2798690/150‑1 (MQ=255)
                                                                                               aaaCGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGc                                                   >  1:2797363/1‑150 (MQ=255)
                                                                                                       cACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACgcgc                                           >  1:2649044/1‑150 (MQ=255)
                                                                                                          cgcgTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCcac                                        >  2:2921285/1‑150 (MQ=255)
                                                                                                           gcgTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCcaca                                       <  1:3746518/150‑1 (MQ=255)
                                                                                                            cgtcgtAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACAt                                      >  1:1354130/1‑150 (MQ=255)
                                                                                                             gtcgtAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATc                                     >  1:2168924/1‑150 (MQ=255)
                                                                                                             gtcgtAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATc                                     >  2:2068885/1‑150 (MQ=255)
                                                                                                             gtcgtAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATc                                     >  1:1063884/1‑150 (MQ=255)
                                                                                                             gtcgtAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATc                                     >  1:3179437/1‑150 (MQ=255)
                                                                                                                gtAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACg                                  >  2:3086553/1‑150 (MQ=255)
                                                                                                                  aaaCGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGgc                                <  2:176629/150‑1 (MQ=255)
                                                                                                                  aaaCGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGgc                                >  2:483896/1‑150 (MQ=255)
                                                                                                                  aaaCGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGgc                                >  2:1141956/1‑150 (MQ=255)
                                                                                                                  aaaCGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGgc                                >  1:3672837/1‑150 (MQ=255)
                                                                                                                   aaCGCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGgcg                               >  1:3268824/1‑150 (MQ=255)
                                                                                                                      gCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCAc                            <  2:3079940/150‑1 (MQ=255)
                                                                                                                      gCCCAGCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCAc                            <  1:3376694/150‑1 (MQ=255)
                                                                                                                           gCGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGctct                       >  2:1403041/1‑150 (MQ=255)
                                                                                                                           gCGATAGTTGTTCGATGAGCTGCCAGCTCAGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGctct                       >  2:2397095/1‑150 (MQ=255)
                                                                                                                            cGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGctctc                      >  2:2856496/1‑150 (MQ=255)
                                                                                                                            cGATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGctctc                      <  1:1831393/150‑1 (MQ=255)
                                                                                                                             gATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGctctct                     >  2:2693990/1‑150 (MQ=255)
                                                                                                                             gATAGTTGTTCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGctctct                     <  1:2317213/150‑1 (MQ=255)
                                                                                                                                     ttCGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGCTCTCTTCGGTTTc             >  1:951740/1‑150 (MQ=255)
                                                                                                                                       cGATGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGCTCTCTTCGGTTTCCa           <  2:2143337/150‑1 (MQ=255)
                                                                                                                                          tGAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGCTCTCTTCGGTTTCCAGCa        <  1:2747397/150‑1 (MQ=255)
                                                                                                                                           gAGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGCTCTCTTCGGTTTCCAGCaa       >  1:2351296/1‑150 (MQ=255)
                                                                                                                                            aGCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGCTCTCTTCGGTTTCCAGCAAc      <  2:3206706/150‑1 (MQ=255)
                                                                                                                                             gCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGCTCTCTTCGGTTTCCAGCAAcc     <  1:833609/150‑1 (MQ=255)
                                                                                                                                             gCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGCTCTCTTCGGTTTCCAGCAAcc     <  1:1308782/150‑1 (MQ=255)
                                                                                                                                             gCTGCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGCTCTCTTCGGTTTCCAGCAAcc     <  1:1638560/150‑1 (MQ=255)
                                                                                                                                                gCCAGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGCTCTCTTCGGTTTCCAGCAACCGtt  <  2:1962642/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
TACCGCGCCCTTCCAGCTCCATTTCCCGCATCAGTGAGCGGATGGCCTGCTCCAGGGTGAGATCATCCAACTGGCGCGGACGTAACCGACCCAACAAACGGCGCACCGCGTCGTAAACGCCCAGCGATAGTTGTTCGATGAGCTGCCCGCTCTGCTTCACGCTGGCGTTATCTGCCGCCAGCCGCTGAACAATGCCCGCCTGAGTACGAATAGCAGTGATGGTCTGACCGATATCATCATGCAGCTCACGCGCCACATCACGGCGCACGCTCTCTTCGGTTTCCAGCAACCGTT  >  CP009273/3842320‑3842613

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑