| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 3,993,566 | A→G | intergenic (+61/+86) | uvrD → / ← yigE | DNA‑dependent ATPase I and helicase II/DUF2233 family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,993,566 | 0 | A | G | 99.4% | 1202.9 / NA | 306 | intergenic (+61/+86) | uvrD/yigE | DNA‑dependent ATPase I and helicase II/DUF2233 family protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (173/131); minor base T (1/1); total (174/132) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 306 total aligned reads displayed.
GGTGAGCATAGCCGTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCTAAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACGGGATTGCC > CP009273/3993419‑3993712 | gTGAGCATAGCCGTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTg > 1:181900/1‑150 (MQ=255) gTGAGCATAGCCGTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTg > 2:1373404/1‑150 (MQ=255) gTGAGCATAGCCGTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTGTGGCCTAAAAAATCATTCAGATTCAATAAGTTg > 2:359320/1‑150 (MQ=255) gAGCATAGCCGTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCa < 2:459713/150‑1 (MQ=255) aGCATAGCCGTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCaa > 2:2848579/1‑150 (MQ=255) aGCATAGCCGTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCaa > 2:1005346/1‑150 (MQ=255) aTAGCCGTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAATTTGCAACGt > 1:2337923/1‑150 (MQ=255) aTAGCCGTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGt > 1:1326498/1‑150 (MQ=255) tAGCCGTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTc < 2:3536349/150‑1 (MQ=255) gCCGTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCAt < 1:1451962/150‑1 (MQ=255) gCCGTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCAt < 1:3736651/150‑1 (MQ=255) ccGTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATg < 2:2689330/150‑1 (MQ=255) gTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTa > 2:1465990/1‑150 (MQ=255) tGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGc < 2:2203934/150‑1 (MQ=255) cAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCg < 2:1871646/150‑1 (MQ=255) cATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAggg > 1:2098108/1‑150 (MQ=255) cATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAggg > 2:1806518/1‑150 (MQ=255) tCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGtt < 1:2779271/150‑1 (MQ=255) tCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGtt > 2:2247527/1‑150 (MQ=255) cAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTTACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGttt < 1:2645599/150‑1 (MQ=255) aGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTa > 1:1653629/1‑150 (MQ=255) ccAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTAcgcc > 2:857607/1‑150 (MQ=255) aGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACTTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTAcgccgc > 1:3228951/1‑150 (MQ=255) gTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATc > 1:1589179/1‑150 (MQ=255) aTTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCg > 2:2577979/1‑150 (MQ=255) tAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGc > 1:3109374/1‑150 (MQ=255) aTGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATc > 1:299151/1‑150 (MQ=255) tGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCt > 1:2263118/1‑150 (MQ=255) tGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCt > 1:3611157/1‑150 (MQ=255) cTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTgcg > 2:123439/1‑150 (MQ=255) cTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTgcg < 2:69210/150‑1 (MQ=255) cTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTgcg > 1:3620165/1‑150 (MQ=255) tggtggCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTgcgc > 1:3247592/1‑150 (MQ=255) tggtggCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTgcgc > 1:2233750/1‑150 (MQ=255) gtggCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCa > 1:3069517/1‑150 (MQ=255) gtggCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCa < 2:1586872/150‑1 (MQ=255) ggcATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTc > 2:1640363/1‑150 (MQ=255) aTACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTGAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGt < 2:1296994/150‑1 (MQ=255) aTACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGt > 2:3449026/1‑150 (MQ=255) aTACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGt > 1:3668370/1‑150 (MQ=255) gCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCt < 2:1976253/150‑1 (MQ=255) cGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGac < 1:3465572/150‑1 (MQ=255) ggCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGaca < 1:1508623/150‑1 (MQ=255) tGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACaa > 2:813518/1‑150 (MQ=255) aGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAAc > 1:879946/1‑150 (MQ=255) gTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACt > 2:3429842/1‑150 (MQ=255) gTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACt < 2:2171957/150‑1 (MQ=255) tCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTa < 1:215553/150‑1 (MQ=255) ggTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATc < 2:239624/150‑1 (MQ=255) tgtAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGt < 2:2511530/150‑1 (MQ=255) tAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGttt > 1:3718838/1‑150 (MQ=255) tAACGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGttt > 2:59398/1‑150 (MQ=255) aaCGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGtttt < 2:1383921/150‑1 (MQ=255) aaCGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGtttt > 1:1162592/1‑150 (MQ=255) aaCGTTGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGtttt < 1:2578614/150‑1 (MQ=255) tGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCt < 1:813518/150‑1 (MQ=255) tGCCGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCt > 1:682022/1‑150 (MQ=255) ccGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCttt > 1:3571476/1‑150 (MQ=255) ccGGATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCttt > 2:1708578/1‑150 (MQ=255) ggATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTcc > 1:3682058/1‑150 (MQ=255) gATGCGGTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCg > 2:2982798/1‑150 (MQ=255) gTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGAc < 2:3232891/150‑1 (MQ=255) gTGCTGCGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGAc < 1:1868270/150‑1 (MQ=255) tgcGCACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGaa > 2:3500426/1‑150 (MQ=255) cgcACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAAt < 1:2247527/150‑1 (MQ=255) gcACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGACATc > 1:47340/1‑150 (MQ=255) cACCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCa > 1:909719/1‑150 (MQ=255) aCCTTGTTTGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCAt > 2:2142165/1‑150 (MQ=255) ttgtttGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGt < 1:123439/147‑1 (MQ=255) tgtttGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTg > 2:413510/3‑150 (MQ=255) tttGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGAc < 1:3285446/150‑1 (MQ=255) tttGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGAc < 1:1385728/150‑1 (MQ=255) tGGCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACaa > 1:42044/1‑150 (MQ=255) gCCTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACaaaa > 1:599880/1‑150 (MQ=255) ccTAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAg < 2:2070469/150‑1 (MQ=255) tAAAAAATCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGa < 2:3069742/150‑1 (MQ=255) aaaaaaTCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGAt > 1:2355878/1‑150 (MQ=255) aaaaaTCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATa < 2:3611157/150‑1 (MQ=255) aaaaTCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAg > 1:2843433/1‑150 (MQ=255) aaaaTCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAg > 1:3262337/1‑150 (MQ=255) aaaaTCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAg > 2:18824/1‑150 (MQ=255) aaaTCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGc < 1:3504127/150‑1 (MQ=255) aaaTCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGc > 1:1030691/1‑150 (MQ=255) aaTCATTCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCg < 1:2493725/150‑1 (MQ=255) tCATTGAGATTAAATAATTTGCAACGTCATGTAGGACGGATAGGGCGTTTACGCCGCATCCGTCATCTGCTCCATATTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCTACGGATATCATGGTGACATATGGATAGCGtt < 2:2337923/150‑1 (MQ=255) ttCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGcc < 2:181900/150‑1 (MQ=255) tCAGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCa < 1:2950868/150‑1 (MQ=255) taGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCAc > 2:3714995/2‑150 (MQ=255) aGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACg < 2:3620165/150‑1 (MQ=255) aGATTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACg < 2:888905/150‑1 (MQ=255) aTTCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACggg < 1:576630/150‑1 (MQ=255) ttCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACGGGa < 2:564060/150‑1 (MQ=255) tCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACGGGAt < 1:1708578/150‑1 (MQ=255) tCAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACGGGAt > 2:3141996/1‑150 (MQ=255) cAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACGGGAtt < 1:1936024/150‑1 (MQ=255) cAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACGGGAtt < 2:3247592/150‑1 (MQ=255) cAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACGGGAtt < 2:3201339/150‑1 (MQ=255) cAATAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACGGGAtt < 1:857607/150‑1 (MQ=255) aTAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACGGGATTGc > 1:1752494/1‑150 (MQ=255) aTAAGTTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACGGGATTGc > 2:154553/1‑150 (MQ=255) | GGTGAGCATAGCCGTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAACGTTGCCGGATGCGGTGCTGCGCACCTTATTTGGCCTAAAAAATCATTCAGATTCAATAAATTGCAACGTCATGTAGGCCGGATAGGGCGTTTACGCCGCATCCGGCATCTGCGCCATCTTCAGTATCTGACACAAAACTATCGTTTTAACCTTTCCGCTCGACGGAAATCATGGTGACAAAAGGATAGCGTTGCCACGGGATTGCC > CP009273/3993419‑3993712 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |