Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009273 4,040,044 A→C intergenic (‑82/‑282) yihG ← / → polA inner membrane protein, inner membrane acyltransferase/fused DNA polymerase I 5'‑>3' polymerase/3'‑>5' exonuclease/5'‑>3' exonuclease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092734,040,0440AC100.0% 1002.9 / NA 255intergenic (‑82/‑282)yihG/polAinner membrane protein, inner membrane acyltransferase/fused DNA polymerase I 5'‑>3' polymerase/3'‑>5' exonuclease/5'‑>3' exonuclease
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base C (146/109);  total (146/109)

Only 100 of 261 total aligned reads displayed.

TCAGCAAAAGGGTTATCGCAGCGAGTATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTAAAAGCGATGTAAATAATTTATGCACA  >  CP009273/4039899‑4040190
                                                                                                                                                 |                                                                                                                                                  
  aGCAAAAGGGTTATCGCAGCGAGTATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAAtcattcat                                                                                                                                              <  2:1530242/150‑1 (MQ=255)
  aGCAAAAGGGTTATCGCAGCGAGTATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAAtcattcat                                                                                                                                              <  1:521062/150‑1 (MQ=255)
      aaaGGGTTATCGCAGCGAGTATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCAtatct                                                                                                                                          <  1:741386/150‑1 (MQ=255)
       aaGGGTTATCGCAGCGAGTATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCAtatcta                                                                                                                                         >  2:44289/1‑150 (MQ=255)
          ggTTATCGCAGCGAGTATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATcc                                                                                                                                      >  2:3314438/1‑150 (MQ=255)
            ttATCGCAGCGAGTATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCcac                                                                                                                                    >  1:2720118/1‑150 (MQ=255)
             tATCGCAGCGAGTATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCcaca                                                                                                                                   >  2:2455393/1‑150 (MQ=255)
             tATCGCAGCGAGTATTCTCGTCATAATGAATTTATTCAAAAGGATAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTAAGCAGAAAACGACCCAAAAAACGGATGATCCTTAAGGAGAAAAATCATTCAAATCAATCcaca                                                                                                                                   >  2:1968478/1‑150 (MQ=255)
                 gCAGCGAGTATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAg                                                                                                                               <  2:1064923/150‑1 (MQ=255)
                 gCAGCGAGTATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAg                                                                                                                               >  1:2011632/1‑150 (MQ=255)
                       aGTATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCACGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGaaaaaa                                                                                                                         >  1:3531746/1‑150 (MQ=255)
                        gTATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAAt                                                                                                                        <  1:3391240/150‑1 (MQ=255)
                         tATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTCTCCACATTAGAAAAAATc                                                                                                                       >  2:310833/1‑150 (MQ=255)
                         tATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATc                                                                                                                       <  2:3685755/150‑1 (MQ=255)
                           ttCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATccc                                                                                                                     >  1:1389246/1‑150 (MQ=255)
                             ctcGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCAt                                                                                                                   <  1:1122963/150‑1 (MQ=255)
                              tcGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCAtt                                                                                                                  <  2:1698306/150‑1 (MQ=255)
                                gTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCACGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTAACCACATTAGAAAAAATCCCATTAt                                                                                                                >  1:2436473/1‑150 (MQ=255)
                                 tCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTAtc                                                                                                               >  1:2294052/1‑150 (MQ=255)
                                  cATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTAtct                                                                                                              <  1:3087749/150‑1 (MQ=255)
                                   aTAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTAtctc                                                                                                             <  2:3562552/150‑1 (MQ=255)
                                       tGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAatt                                                                                                         <  2:3182990/150‑1 (MQ=255)
                                        gAATTTATTAAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAatta                                                                                                        <  1:3556865/150‑1 (MQ=255)
                                         aaTTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAattat                                                                                                       >  2:221698/1‑150 (MQ=255)
                                         aaTTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCAATATCTCAattat                                                                                                       >  1:2338858/1‑150 (MQ=255)
                                         aaTTTATTCAAAACGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAattat                                                                                                       >  1:1848450/1‑150 (MQ=255)
                                         aaTTTATTCAAAACGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAattat                                                                                                       >  1:3741472/1‑150 (MQ=255)
                                          aTTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAattatt                                                                                                      <  2:209399/150‑1 (MQ=255)
                                                 cAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGggatg                                                                                               >  2:3617283/1‑150 (MQ=255)
                                                  aaaaGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGggatgg                                                                                              >  2:2891324/1‑150 (MQ=255)
                                                   aaaGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGggatgga                                                                                             >  2:316738/1‑150 (MQ=255)
                                                   aaaGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGggatgga                                                                                             >  2:3134295/1‑150 (MQ=255)
                                                   aaaGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGggat                                                                                                <  2:1445253/147‑1 (MQ=255)
                                                   aaaGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGggat                                                                                                >  1:1445253/1‑147 (MQ=255)
                                                    aaGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGtgatggat                                                                                            >  1:3048026/1‑150 (MQ=255)
                                                    aaGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGggatggat                                                                                            >  1:1539595/1‑150 (MQ=255)
                                                    aaGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGggatggat                                                                                            <  1:17335/150‑1 (MQ=255)
                                                       gTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGattta                                                                                         >  1:3285590/1‑150 (MQ=255)
                                                          aGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGatttattt                                                                                      >  2:808581/1‑150 (MQ=255)
                                                            ccATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTAttttt                                                                                    <  2:2368624/150‑1 (MQ=255)
                                                             cATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTa                                                                                   <  1:2067800/150‑1 (MQ=255)
                                                                aGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACt                                                                                >  2:2687977/1‑150 (MQ=255)
                                                                aGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACt                                                                                >  1:958933/1‑150 (MQ=255)
                                                                aGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACt                                                                                >  2:678646/1‑150 (MQ=255)
                                                                aGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCAAATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACt                                                                                >  1:2249762/1‑150 (MQ=255)
                                                                 gACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTg                                                                               <  1:251876/150‑1 (MQ=255)
                                                                 gACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTg                                                                               >  1:3339617/1‑150 (MQ=255)
                                                                   cAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCa                                                                             >  2:2535536/1‑150 (MQ=255)
                                                                   cAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCa                                                                             >  1:2609175/1‑150 (MQ=255)
                                                                    aGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCAt                                                                            <  2:2918702/150‑1 (MQ=255)
                                                                    aGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCAt                                                                            >  1:2717042/1‑150 (MQ=255)
                                                                     gTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATg                                                                           <  1:1530399/150‑1 (MQ=255)
                                                                      tGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGa                                                                          <  2:1476515/150‑1 (MQ=255)
                                                                        cgcTAAAGAAGCGCACGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGaaa                                                                        >  1:3671902/1‑150 (MQ=255)
                                                                           tAAAGAATCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGTATTTATTTTTAACTGCATGAAAAAc                                                                     <  2:3419763/150‑1 (MQ=255)
                                                                           tAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAAc                                                                     >  2:1226097/1‑150 (MQ=255)
                                                                             aagaagCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACaa                                                                   >  2:2284649/1‑150 (MQ=255)
                                                                               gaagCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAg                                                                 <  2:2720118/150‑1 (MQ=255)
                                                                                  gcgcAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACa                                                              <  2:1709571/150‑1 (MQ=255)
                                                                                       aGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAAcat                                                         <  2:3003056/150‑1 (MQ=255)
                                                                                        ggCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAAcatc                                                        >  2:828520/1‑150 (MQ=255)
                                                                                         gcgcAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAAcatca                                                       <  2:226139/150‑1 (MQ=255)
                                                                                          cgcAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAAcatcat                                                      <  1:2650087/150‑1 (MQ=255)
                                                                                           gcAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATg                                                     >  2:2482052/1‑150 (MQ=255)
                                                                                           gcAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATg                                                     <  1:2765420/150‑1 (MQ=255)
                                                                                           gcAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATg                                                     <  2:3479734/150‑1 (MQ=255)
                                                                                             aGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCt                                                   <  1:612843/150‑1 (MQ=255)
                                                                                             aGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCt                                                   >  2:3785327/1‑150 (MQ=255)
                                                                                             aGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCt                                                   >  2:2587303/1‑150 (MQ=255)
                                                                                             aGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCt                                                   <  1:830088/150‑1 (MQ=255)
                                                                                              gATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTg                                                  <  2:1998564/150‑1 (MQ=255)
                                                                                              gATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTg                                                  >  2:2813729/1‑150 (MQ=255)
                                                                                               aTTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGt                                                 >  2:1137034/1‑150 (MQ=255)
                                                                                                ttttAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTa                                                <  2:2962472/150‑1 (MQ=255)
                                                                                                 tttAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTaa                                               >  1:147226/1‑150 (MQ=255)
                                                                                                     gCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAg                                           <  2:1539595/150‑1 (MQ=255)
                                                                                                       aGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCa                                         >  1:1973626/1‑150 (MQ=255)
                                                                                                        gAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCAt                                        <  1:2773795/150‑1 (MQ=255)
                                                                                                          aaaCGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGa                                      <  2:885800/150‑1 (MQ=255)
                                                                                                           aaCGACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGat                                     >  2:1905884/1‑150 (MQ=255)
                                                                                                              gACCCAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGataat                                  >  1:645946/1‑150 (MQ=255)
                                                                                                               aCCCAAATAACGGATGATCCTTAAGGAGAAAAATCAGTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATGAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGataata                                 <  2:2738186/150‑1 (MQ=255)
                                                                                                                  cAAATAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAAt                              >  1:2950528/1‑150 (MQ=255)
                                                                                                                   aaaTAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAAtt                             >  1:1927232/1‑150 (MQ=255)
                                                                                                                   aaaTAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAAtt                             <  1:2121451/150‑1 (MQ=255)
                                                                                                                    aaTAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTa                            >  2:1375753/1‑150 (MQ=255)
                                                                                                                     aTAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTaa                           >  1:1752090/1‑150 (MQ=255)
                                                                                                                      tAACGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTaaa                          >  2:1561632/1‑150 (MQ=255)
                                                                                                                       aaCGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTaaaa                         <  2:1630215/150‑1 (MQ=255)
                                                                                                                       aaCGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTaaaa                         >  2:1570008/1‑150 (MQ=255)
                                                                                                                       aaCGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTaaaa                         >  2:3465473/1‑150 (MQ=255)
                                                                                                                        aCGGATGATCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAATATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTAAAAg                        <  1:44663/150‑1 (MQ=255)
                                                                                                                            atgatCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTAAAAGCGAt                    <  2:3083882/150‑1 (MQ=255)
                                                                                                                               atCCTTAAGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTAAAAGCGATGTa                 <  1:1948027/150‑1 (MQ=255)
                                                                                                                                      aGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTAAAAGCGATGTAAATAAtt          >  1:1177492/1‑150 (MQ=255)
                                                                                                                                      aGGAGAAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTAAAAGCGATGTAAATAAtt          >  2:2833123/1‑150 (MQ=255)
                                                                                                                                         agaAAAATCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTAAAAGCGATGTAAATAATTTAt       >  2:3228011/1‑150 (MQ=255)
                                                                                                                                            aaaaTCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTAAAAGCGATGTAAATAATTTATGca    >  2:2863548/1‑150 (MQ=255)
                                                                                                                                             aaaTCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTAAAAGCGATGTAAATAATTTATGcac   >  1:500577/1‑150 (MQ=255)
                                                                                                                                             aaaTCATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTAAAAGCGATGTAAATAATTTATGcac   <  2:2163795/150‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                  
TCAGCAAAAGGGTTATCGCAGCGAGTATTCTCGTCATAATGAATTTATTCAAAAGGTTAGCCATAGACAGTGCGCTAAAGAAGCGCAAGGCGCAGATTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACATCATGCTGTAAAAAGCATGATAATAAATTAAAAGCGATGTAAATAATTTATGCACA  >  CP009273/4039899‑4040190

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑