Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009273 4,213,578 C→A intergenic (‑22/‑178) iclR ← / → metH transcriptional repressor/homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092734,213,5780CA100.0% 775.3 / NA 233intergenic (‑22/‑178)iclR/metHtranscriptional repressor/homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (108/125);  total (108/125)

Only 100 of 236 total aligned reads displayed.

GCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAATTTTTAT  >  CP009273/4213431‑4213724
                                                                                                                                                   |                                                                                                                                                  
  cATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTgg                                                                                                                                                <  1:804392/150‑1 (MQ=255)
   aTTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGa                                                                                                                                               <  1:181645/150‑1 (MQ=255)
     tGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGaaa                                                                                                                                             >  2:3667418/1‑150 (MQ=255)
     tGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGaaa                                                                                                                                             >  2:2063415/1‑150 (MQ=255)
      ggATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAAt                                                                                                                                            <  1:3597692/150‑1 (MQ=255)
      ggATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAAt                                                                                                                                            <  2:3778174/150‑1 (MQ=255)
      ggATTCGGCAATCCACTCCAGTAAGTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAAt                                                                                                                                            <  2:2341588/150‑1 (MQ=255)
          tCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAAtcatt                                                                                                                                        <  2:1318048/150‑1 (MQ=255)
              cAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAAtcattttca                                                                                                                                    <  1:156318/150‑1 (MQ=255)
               aaTCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAAtcattttcat                                                                                                                                   <  1:1296642/150‑1 (MQ=255)
               aaTCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAAtcattttcat                                                                                                                                   >  2:1262775/1‑150 (MQ=255)
               aaTCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAAtcattttcat                                                                                                                                   >  1:3504538/1‑150 (MQ=255)
               aaTCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAAtcattttcat                                                                                                                                   <  1:1295833/150‑1 (MQ=255)
                 tCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAAtcattttcattt                                                                                                                                 <  1:3319918/150‑1 (MQ=255)
                  ccACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATcattttcatttt                                                                                                                                >  1:2123966/1‑150 (MQ=255)
                  ccACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATcattttcatttt                                                                                                                                <  1:2898787/150‑1 (MQ=255)
                   cACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCAttttt                                                                                                                               >  1:3026961/1‑150 (MQ=255)
                   cACTCCAGTAATGTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCAttttt                                                                                                                               <  2:2831128/150‑1 (MQ=255)
                    aCTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGCTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTa                                                                                                                              >  2:1185666/1‑150 (MQ=255)
                     cTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTAt                                                                                                                             >  1:3421043/1‑150 (MQ=255)
                      tCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTAtt                                                                                                                            <  2:847162/150‑1 (MQ=255)
                      tCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTAtt                                                                                                                            <  2:3190828/150‑1 (MQ=255)
                       ccAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTg                                                                                                                           <  1:3412893/150‑1 (MQ=255)
                       ccAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTg                                                                                                                           >  1:300841/1‑150 (MQ=255)
                       ccAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTg                                                                                                                           <  2:532032/150‑1 (MQ=255)
                       ccAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTg                                                                                                                           >  2:1371182/1‑150 (MQ=255)
                        cAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGt                                                                                                                          >  2:2581505/1‑150 (MQ=255)
                        cAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGt                                                                                                                          <  1:1149195/150‑1 (MQ=255)
                         aGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGtt                                                                                                                         <  1:1209246/150‑1 (MQ=255)
                           tAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAg                                                                                                                       >  2:609597/1‑150 (MQ=255)
                             aTTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCt                                                                                                                     >  1:1849666/1‑150 (MQ=255)
                                tCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAAt                                                                                                                  >  1:3667086/1‑150 (MQ=255)
                                tCAGGCCACGAGTTAAAGACTGAACCTGTACAGTCGTTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGAGGGAATGGGTGCGACTATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAAt                                                                                                                  <  1:2772977/150‑1 (MQ=255)
                                 cAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATg                                                                                                                 <  2:2086308/150‑1 (MQ=255)
                                 cAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATg                                                                                                                 <  2:3776496/150‑1 (MQ=255)
                                 cAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATg                                                                                                                 >  2:303546/1‑150 (MQ=255)
                                     ccACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAAt                                                                                                             >  1:1540185/1‑150 (MQ=255)
                                      cACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATa                                                                                                            >  2:1072058/1‑150 (MQ=255)
                                          cgTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTa                                                                                                        <  2:2620146/150‑1 (MQ=255)
                                            ttAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTact                                                                                                      >  1:2588418/1‑150 (MQ=255)
                                            ttAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTact                                                                                                      <  2:2361071/150‑1 (MQ=255)
                                             tAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTactg                                                                                                     >  2:1071016/1‑150 (MQ=255)
                                             tAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTactg                                                                                                     <  1:1367975/150‑1 (MQ=255)
                                                aGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTactgaac                                                                                                  <  2:602671/150‑1 (MQ=255)
                                                aGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTactgaac                                                                                                  <  1:2666773/150‑1 (MQ=255)
                                                aGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTactgaac                                                                                                  >  1:2224208/1‑150 (MQ=255)
                                                 gACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTactgaact                                                                                                 <  1:404831/150‑1 (MQ=255)
                                                 gACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTactgaact                                                                                                 <  2:1161118/150‑1 (MQ=255)
                                                  aCTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTactgaactg                                                                                                <  2:997331/150‑1 (MQ=255)
                                                      aaCCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATcc                                                                                            <  2:177157/150‑1 (MQ=255)
                                                      aaCCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTATCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATcc                                                                                            <  2:2687591/150‑1 (MQ=255)
                                                       aCCTGTCCAGTCGCTGGTGCGTTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGTAATGGTTGCGACCATGACAGTCTCTTTTTTCTTTTTAGTTTATATCATTTTCATTTTTATTGTTTGCTATTGCAATAGTTACTGAACTGATCCg                                                                                           <  2:2981954/150‑1 (MQ=255)
                                                        cctgtcctgtCGCTGGTGCGGTGGCATCGGCGGGTTGTCTGCCGCTTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTGTGTTTAGTGGAACTCATTTTCTTTTTTATTGTTAGGTTAGGCAATAGTTACTGTTCTGATCCgt                                                                                          <  2:3268512/150‑2 (MQ=255)
                                                        ccTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGa                                                                                          <  2:1688491/150‑1 (MQ=255)
                                                          tGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATg                                                                                        <  1:3545214/150‑1 (MQ=255)
                                                          tGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATg                                                                                        <  2:2241836/150‑1 (MQ=255)
                                                          tGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATg                                                                                        <  1:852742/150‑1 (MQ=255)
                                                               aGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTa                                                                                   >  1:3339234/1‑150 (MQ=255)
                                                               aGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTa                                                                                   <  2:48772/150‑1 (MQ=255)
                                                                 tCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAAt                                                                                 <  2:648392/150‑1 (MQ=255)
                                                                   gCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGt                                                                               >  1:94381/1‑150 (MQ=255)
                                                                    cTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGtt                                                                              <  2:3110421/150‑1 (MQ=255)
                                                                    cTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGtt                                                                              <  2:590140/150‑1 (MQ=255)
                                                                     tGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTg                                                                             <  2:3525035/150‑1 (MQ=255)
                                                                      ggTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGa                                                                            <  2:1430255/150‑1 (MQ=255)
                                                                           ggTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACaaa                                                                       <  2:1279801/150‑1 (MQ=255)
                                                                                    ggcggGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGtt                                                              <  2:2123966/150‑1 (MQ=255)
                                                                                     gcggGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTg                                                             <  1:1262775/150‑1 (MQ=255)
                                                                                        ggTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCgt                                                          >  2:2018123/1‑150 (MQ=255)
                                                                                        ggTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCgt                                                          >  2:623404/1‑150 (MQ=255)
                                                                                           tttCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCgtggt                                                       <  2:944809/150‑1 (MQ=255)
                                                                                            ttCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCgtggtg                                                      >  1:2669729/1‑150 (MQ=255)
                                                                                            ttCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCgtggtg                                                      <  1:2091122/150‑1 (MQ=255)
                                                                                            ttCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCgtggtg                                                      >  1:3054576/1‑150 (MQ=255)
                                                                                               tGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTc                                                   >  2:429571/1‑150 (MQ=255)
                                                                                                      tttCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTa                                            >  1:2034205/1‑150 (MQ=255)
                                                                                                           cgGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACcaca                                       >  2:3420397/1‑150 (MQ=255)
                                                                                                              gAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGAt                                    <  1:503516/150‑1 (MQ=255)
                                                                                                               aaTGGGTGCGTCCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATg                                   <  1:2063415/150‑1 (MQ=255)
                                                                                                               aaTGGGTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATg                                   <  2:1442132/150‑1 (MQ=255)
                                                                                                                   ggTGCGACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGtt                               >  2:2893216/1‑150 (MQ=255)
                                                                                                                        gACCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGc                          >  2:3635076/1‑150 (MQ=255)
                                                                                                                         aCCATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGcc                         >  1:2550870/1‑150 (MQ=255)
                                                                                                                           cATGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAg                       >  1:919889/1‑150 (MQ=255)
                                                                                                                             tGACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTa                     >  2:2845970/1‑150 (MQ=255)
                                                                                                                              gACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTAt                    <  2:1149150/150‑1 (MQ=255)
                                                                                                                              gACAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTAt                    >  2:2753431/1‑150 (MQ=255)
                                                                                                                                cAGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATgg                  >  1:1553579/1‑150 (MQ=255)
                                                                                                                                 aGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGt                 >  1:1030375/1‑150 (MQ=255)
                                                                                                                                 aGTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGt                 >  1:3775808/1‑150 (MQ=255)
                                                                                                                                  gTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGtt                >  1:2772224/1‑150 (MQ=255)
                                                                                                                                  gTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGtt                >  1:216213/1‑150 (MQ=255)
                                                                                                                                  gTCTCTTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGtt                >  1:1082793/1‑150 (MQ=255)
                                                                                                                                      ctTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTttgtt            <  2:3437422/150‑1 (MQ=255)
                                                                                                                                      ctTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTttgtt            <  2:1542437/150‑1 (MQ=255)
                                                                                                                                      ctTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTttgtt            >  1:444933/1‑150 (MQ=255)
                                                                                                                                      ctTTTTTCTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTttgtt            >  1:2353227/1‑150 (MQ=255)
                                                                                                                                             cTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAAtttt     >  1:747959/1‑150 (MQ=255)
                                                                                                                                             cTGTATAGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAAtttt     <  1:1072058/150‑1 (MQ=255)
                                                                                                                                                tataGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAATTTttat  >  2:3127138/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
GCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCATGTTGCGTGGTGGTCGCTTTTACCACAGATGCGTTTATGCCAGTATGGTTTGTTGAATTTTTAT  >  CP009273/4213431‑4213724

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑