Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009273 4,321,863 A→T intergenic (+42/‑70) proP → / → pmrR proline/glycine betaine transporter/putative membrane‑bound BasS regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092734,321,8630AT100.0% 760.0 / NA 225intergenic (+42/‑70)proP/pmrRproline/glycine betaine transporter/putative membrane‑bound BasS regulator
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (92/133);  total (92/133)

Only 100 of 225 total aligned reads displayed.

TTACGATAATATCGAGCAGAAAATCGATGATATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTGG  >  CP009273/4321716‑4322007
                                                                                                                                                   |                                                                                                                                                
ttACGATAATATCGAGCAGAAAATCGATGATATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTAt                                                                                                                                                <  1:3099884/150‑1 (MQ=255)
 tACGATAATATCGAGCAGAAAATCGATGATATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGCCGCTGTCTTATCAGGCCTAtt                                                                                                                                               >  1:3383395/1‑150 (MQ=255)
 tACGATAATATCGAGCAGAAAATCGATGATATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTAtt                                                                                                                                               <  1:2203425/150‑1 (MQ=255)
    gATAATATCGAGCAGAAAATCGATGATATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGaa                                                                                                                                            <  2:3341575/150‑1 (MQ=255)
    gATAATATCGAGCAGAAAATCGATGATATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGaa                                                                                                                                            <  1:1526060/150‑1 (MQ=255)
     ataataTCGAGCAGAAAATCGATGATATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGTATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAAc                                                                                                                                           <  2:2881236/150‑1 (MQ=255)
      taataTCGAGCAGAAAATCGATGATATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAAct                                                                                                                                          <  1:2945497/150‑1 (MQ=255)
      taataTCGAGCAGAAAATCGATGATATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAAct                                                                                                                                          >  1:2685466/1‑150 (MQ=255)
       aataTCGAGCAGAAAATCGATGATATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAActc                                                                                                                                         >  2:589809/1‑150 (MQ=255)
       aataTCGAGCAGAAAATCGATGATATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAActc                                                                                                                                         >  2:2487282/1‑150 (MQ=255)
         tatCGAGCAGAAAATCGATGATATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCtt                                                                                                                                       <  1:2484625/150‑1 (MQ=255)
            cGAGCAGAAAATCGATGATATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAg                                                                                                                                    <  1:753936/150‑1 (MQ=255)
             gAGCAGAAAATCGATGATATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAgg                                                                                                                                   >  2:1480377/1‑150 (MQ=255)
             gAGCAGAAAATCGATGATATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAgg                                                                                                                                   <  1:3450773/150‑1 (MQ=255)
              aGCAGAAAATCGATGATATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGt                                                                                                                                  >  2:617759/1‑150 (MQ=255)
              aGCAGAAAATCGATGATATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGt                                                                                                                                  >  1:2488126/1‑150 (MQ=255)
               gCAGAAAATCGATGATATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGtt                                                                                                                                 <  2:467033/150‑1 (MQ=255)
               gCAGAAAATCGATGATATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGtt                                                                                                                                 <  1:582097/150‑1 (MQ=255)
               gCAGAAAATCGATGATATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGtt                                                                                                                                 <  2:2333475/150‑1 (MQ=255)
                    aaaTCGATGATATTGACCACGAGATTGCCGATTCGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACtt                                                                                                                            >  2:404939/1‑150 (MQ=255)
                     aaTCGATGATATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTa                                                                                                                           <  1:484874/150‑1 (MQ=255)
                     aaTCGATGATATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTa                                                                                                                           >  1:681057/1‑150 (MQ=255)
                     aaTCGATGATATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTa                                                                                                                           >  2:638503/1‑150 (MQ=255)
                      aTCGATGATATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTaa                                                                                                                          >  1:1494353/1‑150 (MQ=255)
                         gatgatATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAAtct                                                                                                                       <  2:247619/150‑1 (MQ=255)
                         gatgatATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAAtct                                                                                                                       <  2:1974001/150‑1 (MQ=255)
                         gatgatATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAAtct                                                                                                                       >  1:2789229/1‑150 (MQ=255)
                          atgatATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAAtctc                                                                                                                      >  2:2117156/1‑150 (MQ=255)
                           tgatATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATctct                                                                                                                     <  2:146849/150‑1 (MQ=255)
                              tatTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGAc                                                                                                                  <  1:3172231/150‑1 (MQ=255)
                               atTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGAcg                                                                                                                 >  2:3638697/1‑150 (MQ=255)
                               atTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGAcg                                                                                                                 >  1:820343/1‑150 (MQ=255)
                                ttGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGAcgc                                                                                                                <  1:1801721/150‑1 (MQ=255)
                                ttGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGAcgc                                                                                                                <  1:3687592/150‑1 (MQ=255)
                                 tGACCACGAGATTGCCGATGTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGAcgcg                                                                                                               <  2:1709528/150‑1 (MQ=255)
                                    ccACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCAt                                                                                                            <  2:2793248/150‑1 (MQ=255)
                                     cACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATa                                                                                                           >  1:2894322/1‑150 (MQ=255)
                                      aCGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATAc                                                                                                          <  1:3523068/150‑1 (MQ=255)
                                      aCGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATAc                                                                                                          >  1:3630991/1‑150 (MQ=255)
                                      aCGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATAc                                                                                                          >  1:1678921/1‑150 (MQ=255)
                                         agaTTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATActct                                                                                                       >  2:2009392/1‑150 (MQ=255)
                                            ttGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTctcct                                                                                                    <  1:1406090/150‑1 (MQ=255)
                                              gCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCtcctcc                                                                                                  <  2:3355483/150‑1 (MQ=255)
                                              gCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCtcctcc                                                                                                  <  2:3212985/150‑1 (MQ=255)
                                               ccGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCa                                                                                                 <  2:3096344/150‑1 (MQ=255)
                                                cGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAg                                                                                                <  1:2415352/150‑1 (MQ=255)
                                                    ttGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTa                                                                                            <  2:2398042/150‑1 (MQ=255)
                                                        aGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACgg                                                                                        <  2:3787339/150‑1 (MQ=255)
                                                        aGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACgg                                                                                        >  2:921916/1‑150 (MQ=255)
                                                          gCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACggag                                                                                      <  2:67805/150‑1 (MQ=255)
                                                          gCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACggag                                                                                      <  2:2188033/150‑1 (MQ=255)
                                                            gAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACggagga                                                                                    >  1:2029100/1‑150 (MQ=255)
                                                              aaCGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGgaga                                                                                  <  2:1120690/150‑1 (MQ=255)
                                                                cGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGt                                                                                <  1:3611385/150‑1 (MQ=255)
                                                                cGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGt                                                                                >  1:1289906/1‑150 (MQ=255)
                                                                 gTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTg                                                                               >  1:3769141/1‑150 (MQ=255)
                                                                     ccGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAAt                                                                           <  1:1845399/150‑1 (MQ=255)
                                                                     ccGCCTCGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAAt                                                                           >  2:237057/1‑150 (MQ=255)
                                                                      cGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGATACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATg                                                                          <  1:1057684/150‑1 (MQ=255)
                                                                      cGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATg                                                                          >  1:3326110/1‑150 (MQ=255)
                                                                        ccTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGaa                                                                        >  2:338182/1‑150 (MQ=255)
                                                                            gTGCAGCAACATCCGCGAAGTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAAc                                                                    <  2:3598577/150‑1 (MQ=255)
                                                                             tGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAAcc                                                                   <  1:1809053/150‑1 (MQ=255)
                                                                                agcaACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCgtg                                                                >  1:92404/1‑150 (MQ=255)
                                                                                  caACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGtt                                                              <  1:139598/150‑1 (MQ=255)
                                                                                    aCATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTa                                                            >  1:2209397/1‑150 (MQ=255)
                                                                                     cATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTAt                                                           <  2:488452/150‑1 (MQ=255)
                                                                                     cATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTAt                                                           <  2:885783/150‑1 (MQ=255)
                                                                                        ccGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGaa                                                        <  2:3756026/150‑1 (MQ=255)
                                                                                        ccGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGaa                                                        <  2:1862915/150‑1 (MQ=255)
                                                                                         cgcgAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGaaa                                                       >  2:198918/1‑150 (MQ=255)
                                                                                           cgAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGt                                                     <  2:2685466/150‑1 (MQ=255)
                                                                                             aaTTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGttt                                                   <  2:510522/150‑1 (MQ=255)
                                                                                                    gaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTAcc                                            >  1:118670/1‑150 (MQ=255)
                                                                                                    gaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTAcc                                            >  1:103954/1‑150 (MQ=255)
                                                                                                     aaTAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCg                                           >  1:2997993/1‑150 (MQ=255)
                                                                                                       tAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCgtg                                         >  2:1854369/1‑150 (MQ=255)
                                                                                                          gCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTc                                      >  2:2628790/1‑150 (MQ=255)
                                                                                                          gCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTc                                      >  2:207547/1‑150 (MQ=255)
                                                                                                           cTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCa                                     <  2:2784703/150‑1 (MQ=255)
                                                                                                           cTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCa                                     <  2:2270002/150‑1 (MQ=255)
                                                                                                            tGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAg                                    <  1:169511/150‑1 (MQ=255)
                                                                                                                  ggATGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCt                              >  1:3717656/1‑150 (MQ=255)
                                                                                                                    aTGGCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCtgg                            >  1:273797/1‑150 (MQ=255)
                                                                                                                      ggCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCtggtg                          <  2:1433865/150‑1 (MQ=255)
                                                                                                                      ggCCTGATGTGACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCtggtg                          <  1:2846752/150‑1 (MQ=255)
                                                                                                                             tgtgACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTcagca                   <  1:3795033/150‑1 (MQ=255)
                                                                                                                              gtgACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTcagcag                  <  1:3244665/150‑1 (MQ=255)
                                                                                                                              gtgACGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTcagcag                  <  1:1926954/150‑1 (MQ=255)
                                                                                                                                  cGCTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGcttt              >  2:1126561/1‑150 (MQ=255)
                                                                                                                                    cTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTATCTACCGTGTTCAGCGTGCTGGTGGTCAGCAGctttct            <  2:2915590/150‑1 (MQ=255)
                                                                                                                                    cTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGctttct            <  2:1289906/150‑1 (MQ=255)
                                                                                                                                    cTGTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGctttct            <  2:3525777/150‑1 (MQ=255)
                                                                                                                                      gTCTTATCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGctttcttt          >  1:2853633/1‑150 (MQ=255)
                                                                                                                                           aTCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATc     >  2:70801/1‑150 (MQ=255)
                                                                                                                                            tCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCt    <  2:2869561/150‑1 (MQ=255)
                                                                                                                                            tCAGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCt    >  2:1552090/1‑150 (MQ=255)
                                                                                                                                             cAGGCCTATTGAACTCTTAAGGTACACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTg   <  1:2637989/150‑1 (MQ=255)
                                                                                                                                              aGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTgg  <  1:42558/150‑1 (MQ=255)
                                                                                                                                              aGGCCTATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTgg  <  2:1791341/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                
TTACGATAATATCGAGCAGAAAATCGATGATATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTGG  >  CP009273/4321716‑4322007

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑