Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009273 4,499,530 G→T pseudogene (705/785 nt) insO → pseudogene, IS911 transposase B;IS, phage, Tn; Transposon‑related functions; extrachromosomal; transposon related

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092734,499,5300GT100.0% 649.0 / NA 196pseudogene (705/785 nt)insOpseudogene, IS911 transposase B;IS, phage, Tn; Transposon‑related functions; extrachromosomal; transposon related
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (99/97);  total (99/97)

Only 100 of 196 total aligned reads displayed.

CTGCTGGGATAACAGCCCAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCAGC  >  CP009273/4499385‑4499676
                                                                                                                                                 |                                                                                                                                                  
ctgctgGGATAACAGCCCAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAata                                                                                                                                                >  1:1323798/1‑150 (MQ=255)
    tgGGATAACAGCCCAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAAt                                                                                                                                            <  1:3367212/150‑1 (MQ=255)
     gggATAACAGCCCAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAAtg                                                                                                                                           >  1:2513204/1‑150 (MQ=255)
       gATAACAGCCCAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAAtggt                                                                                                                                         <  1:619953/150‑1 (MQ=255)
        aTAACAGCCCAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAAtggtg                                                                                                                                        >  1:3366784/1‑150 (MQ=255)
         tAACAGCCCAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAAtggtgg                                                                                                                                       >  1:2891327/1‑150 (MQ=255)
          aaCAGCCCAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTggg                                                                                                                                      <  2:1787233/150‑1 (MQ=255)
            cAGCCCAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGtt                                                                                                                                    <  1:883340/150‑1 (MQ=255)
             aGCCCAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGt                                                                                                                                     >  1:278038/1‑148 (MQ=255)
             aGCCCAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTa                                                                                                                                   <  1:2282945/150‑1 (MQ=255)
               cccAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTacc                                                                                                                                 >  2:1009759/1‑150 (MQ=255)
                 cAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTaccac                                                                                                                               >  2:562024/1‑150 (MQ=255)
                  aaTGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTaccacc                                                                                                                              <  2:2732525/150‑1 (MQ=255)
                   aTGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTAccacca                                                                                                                             >  1:295481/1‑150 (MQ=255)
                    tGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCaa                                                                                                                            <  2:2790800/150‑1 (MQ=255)
                    tGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCaa                                                                                                                            <  2:339968/150‑1 (MQ=255)
                      gAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAAc                                                                                                                          <  2:1575026/150‑1 (MQ=255)
                       aGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACg                                                                                                                         >  2:640230/1‑150 (MQ=255)
                        gcgcTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGa                                                                                                                        >  1:2897794/1‑150 (MQ=255)
                         cgcTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGaa                                                                                                                       <  2:1012593/150‑1 (MQ=255)
                               ttcAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGaa                                                                                                                 <  2:3189352/150‑1 (MQ=255)
                               ttcAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGaa                                                                                                                 <  2:1290523/150‑1 (MQ=255)
                                tcAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGaaa                                                                                                                >  1:2145717/1‑150 (MQ=255)
                                tcAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGaaa                                                                                                                <  2:1931865/150‑1 (MQ=255)
                                tcAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTGGGATATTACAGCGCACTAAGACCGCACTAATATACTGGTGGGTTACTACCAAACGAATCAGaaa                                                                                                                <  2:3787789/150‑1 (MQ=255)
                                 cAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGaaaa                                                                                                               >  1:2936501/1‑150 (MQ=255)
                                   ggAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAAcc                                                                                                             >  1:2017579/1‑150 (MQ=255)
                                     aGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGa                                                                                                           >  2:3541020/1‑150 (MQ=255)
                                      gTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGAt                                                                                                          <  2:828779/150‑1 (MQ=255)
                                          gaagaaCGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTg                                                                                                      >  2:594502/1‑150 (MQ=255)
                                           aagaaCGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTgg                                                                                                     >  2:397247/1‑150 (MQ=255)
                                           aagaaCGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTgg                                                                                                     <  2:989391/150‑1 (MQ=255)
                                            agaaCGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGa                                                                                                    >  1:2607163/1‑150 (MQ=255)
                                                cGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGaaaaa                                                                                                <  1:1689457/150‑1 (MQ=255)
                                                 gAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCTCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAAc                                                                                               <  1:985179/150‑1 (MQ=255)
                                                 gAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAAc                                                                                               <  2:3480065/150‑1 (MQ=255)
                                                  aaTGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAAct                                                                                              <  2:3604561/150‑1 (MQ=255)
                                                     gggTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTa                                                                                           >  2:2140158/1‑150 (MQ=255)
                                                     gggTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTa                                                                                           <  2:2382580/150‑1 (MQ=255)
                                                     gggTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTa                                                                                           <  2:1902555/150‑1 (MQ=255)
                                                        tGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAAcg                                                                                        <  1:3586796/150‑1 (MQ=255)
                                                        tGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAAcg                                                                                        <  1:1930640/150‑1 (MQ=255)
                                                               gACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGc                                                                                 >  2:3083223/1‑150 (MQ=255)
                                                               gACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGc                                                                                 >  1:1906344/1‑150 (MQ=255)
                                                                aCGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGcc                                                                                <  2:1722546/150‑1 (MQ=255)
                                                                  gggCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAg                                                                              >  1:1825607/1‑150 (MQ=255)
                                                                  gggCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAg                                                                              <  2:676869/150‑1 (MQ=255)
                                                                   ggCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGt                                                                             >  1:1883027/1‑150 (MQ=255)
                                                                   ggCTATGTAAGCATCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAAACAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGt                                                                             >  2:1388089/1‑150 (MQ=255)
                                                                      tATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGtttt                                                                          >  1:3448647/1‑150 (MQ=255)
                                                                      tATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGtttt                                                                          >  1:2788824/1‑150 (MQ=255)
                                                                      tATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGtttt                                                                          >  2:3612152/1‑150 (MQ=255)
                                                                          tAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATGTTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGtt                                                                      <  2:3308353/150‑1 (MQ=255)
                                                                           aaGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTg                                                                     >  2:2574169/1‑150 (MQ=255)
                                                                           aaGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTg                                                                     <  2:3279841/150‑1 (MQ=255)
                                                                            aGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGa                                                                    >  2:1227674/1‑150 (MQ=255)
                                                                             gCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGAc                                                                   >  2:3742061/1‑150 (MQ=255)
                                                                               ttCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACca                                                                 <  2:2602106/150‑1 (MQ=255)
                                                                                 cAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACcaca                                                               >  2:222013/1‑150 (MQ=255)
                                                                                   gCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCacaac                                                             <  1:2879781/150‑1 (MQ=255)
                                                                                     gATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAg                                                           <  1:1724217/150‑1 (MQ=255)
                                                                                      aTGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGa                                                          >  1:3441963/1‑150 (MQ=255)
                                                                                          aGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTAc                                                      >  1:1842490/1‑150 (MQ=255)
                                                                                           gCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTAcc                                                     >  2:141140/1‑150 (MQ=255)
                                                                                              cACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGa                                                  <  1:1480314/150‑1 (MQ=255)
                                                                                              cACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGa                                                  <  1:3378811/150‑1 (MQ=255)
                                                                                                cGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAg                                                >  2:1114085/1‑150 (MQ=255)
                                                                                                cGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAg                                                >  1:1634228/1‑150 (MQ=255)
                                                                                                  cAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAggg                                              >  2:769568/1‑150 (MQ=255)
                                                                                                  cAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAggg                                              >  1:496979/1‑150 (MQ=255)
                                                                                                      aaCGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGcc                                          >  1:2610528/1‑150 (MQ=255)
                                                                                                       aCGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCcg                                         <  2:1961806/150‑1 (MQ=255)
                                                                                                        cGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCcgc                                        >  2:2664144/1‑150 (MQ=255)
                                                                                                         ggACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCcgcg                                       <  2:2017579/150‑1 (MQ=255)
                                                                                                         ggACTATATCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCcgcg                                       >  2:2156031/1‑150 (MQ=255)
                                                                                                             tataTCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCg                                   >  1:862748/1‑150 (MQ=255)
                                                                                                                 tCGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTg                               <  1:594502/150‑1 (MQ=255)
                                                                                                                  cGTTGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTgg                              <  2:1259442/150‑1 (MQ=255)
                                                                                                                    ttGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCa                            >  2:508725/1‑150 (MQ=255)
                                                                                                                    ttGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCa                            <  1:1125904/150‑1 (MQ=255)
                                                                                                                     tGGATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAg                           <  2:438354/150‑1 (MQ=255)
                                                                                                                       gATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGtt                         <  2:1175367/150‑1 (MQ=255)
                                                                                                                       gATATTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGtt                         <  2:1220927/150‑1 (MQ=255)
                                                                                                                        atatTACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTg                        >  1:1755304/1‑150 (MQ=255)
                                                                                                                          atTACAGCGAACTAAGACAGCACTAATATAATTGTTGGTTACAACCAAACGAATCAGAAAACCGATACTGGAAAAACTATAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCa                      <  2:2924121/150‑1 (MQ=255)
                                                                                                                            tACAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGt                    >  1:110631/1‑150 (MQ=255)
                                                                                                                             aCAGCGCACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTa                   >  1:2324100/1‑150 (MQ=255)
                                                                                                                                gcgcACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCa                <  2:2891327/150‑1 (MQ=255)
                                                                                                                                gcgcACTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCa                <  2:2931109/150‑1 (MQ=255)
                                                                                                                                    aCTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGgag            >  1:7289/1‑150 (MQ=255)
                                                                                                                                    aCTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGgag            >  2:496448/1‑150 (MQ=255)
                                                                                                                                    aCTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGgag            <  1:3179243/150‑1 (MQ=255)
                                                                                                                                     cTAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGgaga           >  1:3351051/1‑150 (MQ=255)
                                                                                                                                      tAAGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGat          >  1:261528/1‑150 (MQ=255)
                                                                                                                                       aaGACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGatc         >  1:1778642/1‑150 (MQ=255)
                                                                                                                                         gACCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGatcat       >  2:1878219/1‑150 (MQ=255)
                                                                                                                                          aCCGCACTAATATAATGGTGGGTTACCACCAGACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGatcatc      <  1:209942/150‑1 (MQ=255)
                                                                                                                                          aCCGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGatcatc      <  1:3742061/150‑1 (MQ=255)
                                                                                                                                            cGCACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCa    >  2:1340690/1‑150 (MQ=255)
                                                                                                                                              cACTAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCAGc  >  2:3118368/1‑150 (MQ=255)
                                                                                                                                                 |                                                                                                                                                  
CTGCTGGGATAACAGCCCAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCAGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGACCACAACAGACTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCAGC  >  CP009273/4499385‑4499676

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: