Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009273 4,547,818 C→A D97Y (GAT→TAT)  hypT ← hypochlorite‑responsive transcription factor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092734,547,8180CA100.0% 729.6 / NA 217D97Y (GAT→TAT) hypThypochlorite‑responsive transcription factor
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (105/112);  total (105/112)

Only 100 of 217 total aligned reads displayed.

TCACGCAGTTTATCGACCGCTTCATCGACATCAATAGCTTCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATCGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGTTAAACAATTCAACACCAATCGCCTGTTCCAGCG  >  CP009273/4547673‑4547964
                                                                                                                                                 |                                                                                                                                                  
tCACGCAGTTTATCGACCGCTTCATCGACATCAATAGCTTCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTg                                                                                                                                                <  2:1740519/150‑1 (MQ=255)
 cACGCAGTTTATCGACCGCTTCATCGACATCAATAGCTTCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTgc                                                                                                                                               >  2:575126/1‑150 (MQ=255)
   cGCAGTTTATCGACCGCTTCATCGACATCAATAGCTTCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTgccg                                                                                                                                             >  1:372868/1‑150 (MQ=255)
   cGCAGTTTATCGACCGCTTCATCGACATCAATAGCTTCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTgccg                                                                                                                                             >  2:1618287/1‑150 (MQ=255)
    caaGTTTATCGACCGCTTCATCGACATCAAAAGCTTCAATTGCCCAGGTAAAGAGAGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTAGCTTGATTTTTCGTTGCGCGTAATAGCTgccgc                                                                                                                                            >  2:2951202/3‑150 (MQ=255)
       gTTTATCGACCGCTTCATCGACATCAATAGCTTCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCAc                                                                                                                                         >  1:2610695/1‑150 (MQ=255)
          tATCGACCGCTTCATCGACATCAATAGCTTCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCa                                                                                                                                      >  2:2098668/1‑150 (MQ=255)
          tATCGACCGCTTCATCGACATCAATAGCTTCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCa                                                                                                                                      >  2:2099166/1‑150 (MQ=255)
           aTCGACCGCTTCATCGACATCAATAGCTTCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAg                                                                                                                                     >  2:2852511/1‑150 (MQ=255)
              gACCGCTTCATCGACATCAATAGCTTCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGctc                                                                                                                                  >  2:1976652/1‑150 (MQ=255)
               aCCGCTTCATCGACATCAATAGCTTCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGctct                                                                                                                                 >  2:2202257/1‑150 (MQ=255)
               aCCGCTTCATCGACATCAATAGCTTCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGctct                                                                                                                                 <  1:949437/150‑1 (MQ=255)
                 cGCTTCATCGACATCAATAGCTTCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGc                                                                                                                               >  1:135322/1‑150 (MQ=255)
                  gCTTCATCGACATCAATAGCTTCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGnc                                                                                                                              <  1:3113300/150‑1 (MQ=255)
                  gCTTCATCGACATCAATAGCTTCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGcc                                                                                                                              <  2:1217241/150‑1 (MQ=255)
                  gCTTCATCGACATCAATAGCTTCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGcc                                                                                                                              <  2:1322559/150‑1 (MQ=255)
                   cTTCATCGACATCAATAGCTTCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCa                                                                                                                             <  1:3535434/150‑1 (MQ=255)
                   cTTCATCGACATCAATAGCTTCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCa                                                                                                                             <  1:2993533/150‑1 (MQ=255)
                     tCATCGACATCAATAGCTTCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGa                                                                                                                           <  1:2217207/150‑1 (MQ=255)
                         cGACATCAATAGCTTCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGc                                                                                                                       >  2:3479143/1‑150 (MQ=255)
                              tCAATAGCTTCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGctctct                                                                                                                  <  1:2219905/150‑1 (MQ=255)
                                aaTAGCTTCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGACAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTaa                                                                                                                >  2:3746132/1‑150 (MQ=255)
                                 aTAGCTTCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAAc                                                                                                               <  1:1757073/150‑1 (MQ=255)
                                  tAGCTTCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACt                                                                                                              <  1:1176793/150‑1 (MQ=255)
                                   aGCTTCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTg                                                                                                             <  2:1692387/150‑1 (MQ=255)
                                   aGCTTCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTg                                                                                                             >  2:1564523/1‑150 (MQ=255)
                                     cTTCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGtt                                                                                                           <  1:2905072/150‑1 (MQ=255)
                                       tCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGc                                                                                                         <  1:3231097/150‑1 (MQ=255)
                                              cccAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGAt                                                                                                  >  2:3074739/1‑150 (MQ=255)
                                                cAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATgg                                                                                                >  2:369132/1‑150 (MQ=255)
                                                 aGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGc                                                                                               >  2:3627895/1‑150 (MQ=255)
                                                  ggTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCg                                                                                              >  2:1258915/1‑150 (MQ=255)
                                                  ggTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCg                                                                                              <  1:3357250/150‑1 (MQ=255)
                                                  ggTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCg                                                                                              >  2:3159061/1‑150 (MQ=255)
                                                       agagCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCt                                                                                         >  1:2164029/1‑150 (MQ=255)
                                                        gagCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTg                                                                                        <  2:2800245/150‑1 (MQ=255)
                                                         agCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGc                                                                                       <  1:426310/150‑1 (MQ=255)
                                                             gcggcATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAAt                                                                                   <  1:2106535/150‑1 (MQ=255)
                                                                 cATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGaa                                                                               >  2:64911/1‑150 (MQ=255)
                                                                  aTCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAg                                                                              <  1:636203/150‑1 (MQ=255)
                                                                    cTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGAt                                                                            <  2:2826720/150‑1 (MQ=255)
                                                                    cTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGAt                                                                            <  2:792421/150‑1 (MQ=255)
                                                                         tGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTcc                                                                       <  2:1361949/150‑1 (MQ=255)
                                                                         tGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTcc                                                                       <  1:2560475/150‑1 (MQ=255)
                                                                         tGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTcc                                                                       >  1:1940824/1‑150 (MQ=255)
                                                                          gATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTccc                                                                      <  2:2580959/150‑1 (MQ=255)
                                                                           aTAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCt                                                                     >  1:1179173/1‑150 (MQ=255)
                                                                           aTAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCt                                                                     <  2:2220411/150‑1 (MQ=255)
                                                                           aTAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCt                                                                     >  1:3221405/1‑150 (MQ=255)
                                                                            tAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCtt                                                                    <  2:2703825/150‑1 (MQ=255)
                                                                            tAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCtt                                                                    >  1:718606/1‑150 (MQ=255)
                                                                               tGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGtt                                                                 <  2:2463679/150‑1 (MQ=255)
                                                                               tGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACACATGGCGGATCTGCGAATGGAAGATTTTCCCTTGtt                                                                 >  1:2342481/1‑150 (MQ=255)
                                                                                 gACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCt                                                               >  2:1438928/1‑150 (MQ=255)
                                                                                 gACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCt                                                               <  1:2514479/150‑1 (MQ=255)
                                                                                  aCGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTg                                                              <  1:3775136/150‑1 (MQ=255)
                                                                                       aaCAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGt                                                         >  2:2044464/1‑150 (MQ=255)
                                                                                        aCAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGtt                                                        >  1:3485425/1‑150 (MQ=255)
                                                                                         cAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTg                                                       >  2:3539127/1‑150 (MQ=255)
                                                                                          aGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGc                                                      >  2:491108/1‑150 (MQ=255)
                                                                                            cccGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAg                                                    >  2:1669127/1‑150 (MQ=255)
                                                                                             ccGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAgc                                                   <  2:377258/150‑1 (MQ=255)
                                                                                                aGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAgcggg                                                <  2:2274070/150‑2 (MQ=255)
                                                                                                    aaaGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTa                                            <  1:1964273/150‑1 (MQ=255)
                                                                                                       gagagTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCt                                         >  2:2997062/1‑150 (MQ=255)
                                                                                                        agagTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTg                                        >  2:326177/1‑150 (MQ=255)
                                                                                                        agagTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTg                                        <  1:1636588/150‑1 (MQ=255)
                                                                                                           gtgtGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCg                                     <  2:2342481/150‑1 (MQ=255)
                                                                                                           gtgtGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCg                                     >  2:1234587/1‑150 (MQ=255)
                                                                                                             gtgCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGt                                   <  1:2751853/150‑1 (MQ=255)
                                                                                                              tgCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGtt                                  <  1:921677/150‑1 (MQ=255)
                                                                                                              tgCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGtt                                  <  1:1376961/150‑1 (MQ=255)
                                                                                                              tgCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGtt                                  >  2:1180980/1‑150 (MQ=255)
                                                                                                              tgCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGtt                                  <  2:1934509/150‑1 (MQ=255)
                                                                                                              tgCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGtt                                  <  2:3358452/150‑1 (MQ=255)
                                                                                                               tcAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGTTa                                 >  1:680727/2‑150 (MQ=255)
                                                                                                               gCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGTTa                                 <  1:15403/150‑1 (MQ=255)
                                                                                                                   cGGCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGTTAAACa                             <  1:2863305/150‑1 (MQ=255)
                                                                                                                    ggCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGTTAAACaa                            >  2:2392167/1‑150 (MQ=255)
                                                                                                                    ggCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGTTAAACaa                            >  2:1737624/1‑150 (MQ=255)
                                                                                                                     gCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGTTAAACAAt                           >  1:2375305/1‑150 (MQ=255)
                                                                                                                     gCTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGTTAAACAAt                           >  1:3609492/1‑150 (MQ=255)
                                                                                                                      cTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGTTAAACAAtt                          <  1:850481/150‑1 (MQ=255)
                                                                                                                      cTATCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGTTAAACAAtt                          >  2:1393447/1‑150 (MQ=255)
                                                                                                                         tCTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGTTAAACAATTCaa                       >  2:1944814/1‑150 (MQ=255)
                                                                                                                          cTTGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGTTAAACAATTCAac                      <  1:2020496/150‑1 (MQ=255)
                                                                                                                           ttGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGTTAAACAATTCAaca                     <  2:1845255/150‑1 (MQ=255)
                                                                                                                           ttGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGTTAAACAATTCAaca                     <  1:3159061/150‑1 (MQ=255)
                                                                                                                           ttGATTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGTTAAACAATTCAaca                     <  1:1258915/150‑1 (MQ=255)
                                                                                                                              aTTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGTTAAACAATTCAACACCa                  >  2:1585723/1‑150 (MQ=255)
                                                                                                                              aTTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGTTAAACAATTCAACACCa                  >  1:1833378/1‑150 (MQ=255)
                                                                                                                              aTTTTTCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGTTAAACAATTCAACACCa                  <  1:3539127/150‑1 (MQ=255)
                                                                                                                                ttttCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGTTAAACAATTCAACACCAAt                >  1:2611715/1‑150 (MQ=255)
                                                                                                                                  ttCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGTTAAACAATTCAACACCAATCg              <  2:3485425/150‑1 (MQ=255)
                                                                                                                                  ttCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGTTAAACAATTCAACACCAATCg              <  2:2617436/150‑1 (MQ=255)
                                                                                                                                   tCGTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGTTAAACAATTCAACACCAATCGc             >  2:637727/1‑150 (MQ=255)
                                                                                                                                     gTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGTTAAACAATTCAACACCAATCGCCt           >  2:1507673/1‑150 (MQ=255)
                                                                                                                                     gTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGTTAAACAATTCAACACCAATCGCCt           >  2:3585875/1‑150 (MQ=255)
                                                                                                                                     gTTGCGCGTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGTTAAACAATTCAACACCAATCGCCt           >  2:67943/1‑150 (MQ=255)
                                                                                                                                          gcgTAATAGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGTTAAACAATTCAACACCAATCGCCTGTTcc      <  1:3603261/150‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                  
TCACGCAGTTTATCGACCGCTTCATCGACATCAATAGCTTCAATTGCCCAGGTAAAGAGCGGCGGCATCTGGCTGATAATGGACGGTAACAGCCCGAGGGAAAGAGAGTGTGCAGCGGCTATCTTGATTTTTCGTTGCGCGTAATCGCTGCCGCCACGCAGCTCTGCCAGATTGCTCTCTAACTGTTGCAACAGATGGCGGATCTGCGAATGGAAGATTTTCCCTTGTTCTGAGAGTTGCAGCGGCGTTACCTGGCGGTTAAACAATTCAACACCAATCGCCTGTTCCAGCG  >  CP009273/4547673‑4547964

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑