| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 427,575 | A→G | intergenic (‑106/+193) | tsx ← / ← yajI | nucleoside channel, receptor of phage T6 and colicin K/putative lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 427,575 | 0 | A | G | 99.6% | 915.7 / NA | 232 | intergenic (‑106/+193) | tsx/yajI | nucleoside channel, receptor of phage T6 and colicin K/putative lipoprotein |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (131/100); total (132/100) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 237 total aligned reads displayed.
AGCGCCAGTACCGCACCGGCTGCCAGTAATGTTTTTTTCATATGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATG > CP009273/427429‑427721 | agCGCCAGTACCGCACCGGCTGCCAGTAATGTTTTTTTCATATGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACgaaa > 2:3442408/1‑150 (MQ=255) gcgcCAGTACCGCACCGGCTGCCAGTAATGTTTTTTTCATATGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACgaaaa < 2:3080143/150‑1 (MQ=255) cgcCAGTACCGCACCGGCTGCCAGTAATGTTTTTTTCATATGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAat < 1:871385/150‑1 (MQ=255) aGTACCGCACCGGCTGCCAGTAATGTTTTTTTCATATGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATgt > 2:912577/1‑150 (MQ=255) gTACCGCACCGGCTGCCAGTAATGTTTTTTTCATATGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATgtt > 2:2060108/1‑150 (MQ=255) ccGCACCGGCTGCCAGTAATGTTTTTTTCATATGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATgtttcg < 1:1652517/150‑1 (MQ=255) cGCACCGGCTGCCAGTAATGTTTTTTTCATATGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATgtttcgt < 2:1421194/150‑1 (MQ=255) cACCGGCTGCCAGTAATGTTTTTTTCATATGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATgtttcgttt < 1:2728255/150‑1 (MQ=255) aCCGGCTGCCAGTAATGTTTTTTTCATATGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATgtttcgtttc < 1:1325102/150‑1 (MQ=255) ccGGCTGCCAGTAATGTTTTTTTCATATGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTca < 2:817699/150‑1 (MQ=255) cGGCTGCCAGTAATGTTTTTTTCATATGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTcac < 1:1346487/150‑1 (MQ=255) cTGCCAGTAATGTTTTTTTCATATGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGt > 1:1160303/1‑150 (MQ=255) cTGCCAGTAATGTTTTTTTCATATGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGt > 2:440782/1‑150 (MQ=255) cTGCCAGTAATGTTTTTTTCATATGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGt < 2:480202/150‑1 (MQ=255) tGCCAGTAATGTTTTTTTCATATGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGtt > 2:597611/1‑150 (MQ=255) ccAGTAATGTTTTTTTCATATGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCt > 1:1698740/1‑150 (MQ=255) gTAATGTTTTTTTCATATGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATc > 2:68915/1‑150 (MQ=255) aTGTTTTTTTCATATGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCAtt > 2:419128/1‑150 (MQ=255) tGTTTTTTTCATATGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCAttt < 1:2987598/150‑1 (MQ=255) gTTTTTTTCATATGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTa > 1:2510547/1‑150 (MQ=255) tttttCATATGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGt > 2:86007/1‑150 (MQ=255) tttCATATGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTaa > 1:1491065/1‑150 (MQ=255) ttCATATGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAAt < 1:100554/150‑1 (MQ=255) ttCATATGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAAt > 1:388472/1‑150 (MQ=255) tCATATGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATc < 1:3567100/150‑1 (MQ=255) cATATGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGTAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCg < 1:1576575/150‑1 (MQ=255) atatGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGa > 1:730782/1‑150 (MQ=255) atgtatgCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGAtt > 1:1755322/1‑150 (MQ=255) atgtatgCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGAtt > 2:2027304/1‑150 (MQ=255) tatgCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTTCGTTTCTAAATATATCGAATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAAAAAGTTTCGTTTCACAGTTCTAACATTTAAGTAATCGATTGCg > 2:1254300/1‑150 (MQ=255) tatgCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCg > 2:2495257/1‑150 (MQ=255) tgCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGtt > 2:636064/1‑150 (MQ=255) gCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTc < 1:826218/150‑1 (MQ=255) gCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTc > 2:195698/1‑150 (MQ=255) gCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTc < 1:453503/150‑1 (MQ=255) ccACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCa > 1:2834922/1‑150 (MQ=255) ccACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCa < 2:2662260/150‑1 (MQ=255) ccACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCa > 1:2853800/1‑150 (MQ=255) cACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCAc > 1:1385485/1‑150 (MQ=255) cACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCAc < 2:1611165/150‑1 (MQ=255) cACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCAc < 2:1937797/150‑1 (MQ=255) cTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGt > 2:1563522/1‑150 (MQ=255) cTGTGTGAAAATCCATTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAATACATTGCTCACGAAAATATGATTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCActt > 2:3262743/1‑148 (MQ=255) tGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGtt < 2:902429/150‑1 (MQ=255) ttGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTac < 2:1035265/150‑1 (MQ=255) ttGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTac < 1:396261/150‑1 (MQ=255) tGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTaca < 2:2280235/150‑1 (MQ=255) gAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTacac > 1:144291/1‑150 (MQ=255) aaTCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTAcacaca > 1:3717596/1‑150 (MQ=255) cccTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTc > 1:3509157/1‑150 (MQ=255) ttGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTcggg < 1:3150830/150‑1 (MQ=255) tGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTcgggc < 2:3015585/150‑1 (MQ=255) gggAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTcgggcggg > 2:682741/1‑150 (MQ=255) gAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGa < 1:867958/150‑1 (MQ=255) gTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAACAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGAtt < 2:1059645/150‑1 (MQ=255) aaaaGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTAc > 2:1131134/1‑150 (MQ=255) aaaaGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTAc > 2:2352049/1‑150 (MQ=255) aaaGGCGCATATGGCGTTTCTAAATATGTCGTAGACAGAGGAGCCTATTATAAAAATCAGTGCTCACGATAATATGTTTCGTTTCACAGGTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACt < 1:3313352/150‑1 (MQ=255) aaaGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACt > 2:3408256/1‑150 (MQ=255) aaaGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACt > 2:2169601/1‑150 (MQ=255) aaGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTg > 2:822104/1‑150 (MQ=255) ggCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGAc > 2:3607205/1‑150 (MQ=255) cgcAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACtt > 1:1339944/1‑150 (MQ=255) aaTTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGc > 1:111920/1‑150 (MQ=255) aaTTGCGTTTCTAAATATTTCGTATACAGAGGAGACTATAATAAAAATCATAGAACACAAAAATATGATACGATTAAAAGTACTATAAAATAAGTAAAAGATTGATATCAATATTAAACACATACGGGATCTGATTGAACTGACTTTctc > 1:3319656/1‑148 (MQ=255) ttGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGccc > 1:1055457/1‑150 (MQ=255) gCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCtt < 1:1260127/150‑1 (MQ=255) cGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCttg < 2:2999604/150‑1 (MQ=255) gTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCttgt > 2:2813338/1‑150 (MQ=255) ttCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCttgttg < 2:294155/150‑1 (MQ=255) ttCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCttgttg < 1:260686/150‑1 (MQ=255) tAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCaa > 1:3760370/1‑150 (MQ=255) aaaTATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCaaa > 1:3388820/1‑150 (MQ=255) atTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCAAACttt > 2:2728118/1‑150 (MQ=255) atTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCAAACttt < 1:680132/150‑1 (MQ=255) tttCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCAAACtttt < 1:399351/150‑1 (MQ=255) cGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCACACTTTTACt > 2:3180872/1‑150 (MQ=255) gTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTa < 2:2134149/150‑1 (MQ=255) gTATACAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTa > 2:2529492/1‑150 (MQ=255) tataCAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACGGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTAt < 1:1111751/150‑1 (MQ=255) tataCAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTAt > 1:1620052/1‑150 (MQ=255) ataCAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATc > 2:3521857/1‑150 (MQ=255) cAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAAt < 1:3442408/150‑1 (MQ=255) cAGAGGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAAt > 1:3086604/1‑150 (MQ=255) agagGAGCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATc > 1:2933246/1‑150 (MQ=255) gaggagCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATcc < 1:2414219/150‑1 (MQ=255) aggagCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCa < 1:1026364/150‑1 (MQ=255) ggagCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAg > 2:2637341/1‑150 (MQ=255) gagCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAgg < 2:1738725/150‑1 (MQ=255) gCCTATTATAAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTg < 2:507492/150‑1 (MQ=255) tataAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTaa > 1:950965/1‑150 (MQ=255) taAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGc < 1:2204548/150‑1 (MQ=255) taAAAATCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGc < 1:636064/150‑1 (MQ=255) aaTCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCagag > 1:570232/1‑150 (MQ=255) aaTCATTGCTCACGAAAATAGGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCagag > 1:1554206/1‑150 (MQ=255) aTCATTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGt > 2:3733097/1‑150 (MQ=255) aTTGCTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAAc > 1:2447094/1‑150 (MQ=255) cTCACGAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACaaaa < 1:2305935/150‑1 (MQ=255) cacgAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATg < 1:207536/150‑1 (MQ=255) cacgAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATg > 2:2397737/1‑150 (MQ=255) | AGCGCCAGTACCGCACCGGCTGCCAGTAATGTTTTTTTCATATGTATGCCACTGTTTGAAAATCCCTTGCGGGAGTGAAAAAGGCGCAAATTGCGTTTCTAAATATTTCGTATACAGAGGAGCCTATTATAAAAATCATTGCTCACAAAAATATGTTTCGTTTCACAGTTCTATCATTTACGTAATCGATTGCGTTCACGTTTACACACATTCGGGCGGGGATTGTACTGACTTTCGCCCTTGTTGCAAACTTTTACTATCAATCCAGGTGATGTAAGCAGAGTAACAAAATG > CP009273/427429‑427721 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |