Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009273 559,245 G→T G154C (GGT→TGT)  sfmF → FimA homolog

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP009273559,2450GT100.0% 538.9 / NA 163G154C (GGT→TGT) sfmFFimA homolog
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (90/73);  total (90/73)

Only 100 of 164 total aligned reads displayed.

CCGCAATGGCACAAACCGTCGCCATCGAATTACGTAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCGGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCTAGCTTGCCATAAATATTAGATTTATGCGCA  >  CP009273/559099‑559391
                                                                                                                                                  |                                                                                                                                                  
ccGCAATGGCACAAACCGTCGCCATCGAATTACGTAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCtgtg                                                                                                                                                 >  1:2962145/1‑150 (MQ=255)
       ggCACAAACCGTCGCCATCGAATTACGTAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGcc                                                                                                                                          >  1:2190938/1‑150 (MQ=255)
       ggCACAAACCGTCGCCATCGAATTACGTAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGcc                                                                                                                                          <  1:815441/150‑1 (MQ=255)
       ggCACAAACCGTCGCCATCGAATTACGTAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGcc                                                                                                                                          <  2:213877/150‑1 (MQ=255)
         cacaAACCGTCGCCATCGAATTACGTAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAg                                                                                                                                        >  2:1675545/1‑150 (MQ=255)
         cacaAACCGTCGCCATCGAATTACGTAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAg                                                                                                                                        <  1:3739651/150‑1 (MQ=255)
         cacaAACCGTCGCCATCGAATTACGTAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAg                                                                                                                                        <  1:3741885/150‑1 (MQ=255)
           caAACCGTCGCCATCGAATTACGTAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGgt                                                                                                                                      <  2:1720826/150‑1 (MQ=255)
            aaaCCGTCGCCATCGAATTACGTAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGgtg                                                                                                                                     >  1:661866/1‑150 (MQ=255)
                     ccATCGAATTACGTAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAg                                                                                                                            >  2:615317/1‑150 (MQ=255)
                      cATCGAATTACGTAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGc                                                                                                                           >  1:3020167/1‑150 (MQ=255)
                        tCGAATTACGTAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCgg                                                                                                                         >  1:3605792/1‑150 (MQ=255)
                        tCGAATTACGTAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCgg                                                                                                                         <  1:1810721/150‑1 (MQ=255)
                        tCGAATTACGTAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCgg                                                                                                                         >  1:3606282/1‑150 (MQ=255)
                          gAATTACGTAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGAt                                                                                                                       <  1:1864621/150‑1 (MQ=255)
                          gAATTACGTAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGAt                                                                                                                       >  1:958583/1‑150 (MQ=255)
                            aTTACGTAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGc                                                                                                                     <  2:2050210/150‑1 (MQ=255)
                             ttACGTAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCg                                                                                                                    <  2:2857515/150‑1 (MQ=255)
                               aCGTAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGat                                                                                                                  <  1:3424340/150‑1 (MQ=255)
                                 gTAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGatat                                                                                                                <  1:2630266/150‑1 (MQ=255)
                                 gTAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGatat                                                                                                                <  1:502843/150‑1 (MQ=255)
                                 gTAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGatat                                                                                                                <  2:590597/150‑1 (MQ=255)
                                 gTAAGAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGatat                                                                                                                <  1:2017394/150‑1 (MQ=255)
                                  tAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATAtt                                                                                                               <  1:1729071/150‑1 (MQ=255)
                                   aaTAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATAttt                                                                                                              <  1:1542143/150‑1 (MQ=255)
                                    aTAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTa                                                                                                             >  1:608971/1‑150 (MQ=255)
                                     gaGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTAt                                                                                                            <  1:3790263/149‑1 (MQ=255)
                                         gATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATc                                                                                                        >  2:667898/1‑150 (MQ=255)
                                           tCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCaa                                                                                                      >  2:2335659/1‑150 (MQ=255)
                                            cGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAAt                                                                                                     >  2:1519420/1‑150 (MQ=255)
                                            cGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAAt                                                                                                     >  2:3277153/1‑150 (MQ=255)
                                               tCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATtat                                                                                                  >  1:815203/1‑150 (MQ=255)
                                               tCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATtat                                                                                                  <  1:388953/150‑1 (MQ=255)
                                               tCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATtat                                                                                                  >  2:3538303/1‑150 (MQ=255)
                                               tCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATtat                                                                                                  <  1:1027200/150‑1 (MQ=255)
                                                 ccGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTAtaa                                                                                                <  2:1736840/150‑1 (MQ=255)
                                                 ccGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTAtaa                                                                                                >  2:44988/1‑150 (MQ=255)
                                                  cGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTAtaat                                                                                               >  1:2559049/1‑150 (MQ=255)
                                                   ggCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTAtaatt                                                                                              <  1:2117966/150‑1 (MQ=255)
                                                   ggCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTAtaatt                                                                                              >  1:2810174/1‑150 (MQ=255)
                                                    gCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTAtaatta                                                                                             <  1:1834159/150‑1 (MQ=255)
                                                    gCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTAtaatta                                                                                             <  2:1515805/150‑1 (MQ=255)
                                                      tCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTAtaattaat                                                                                           <  2:3458108/150‑1 (MQ=255)
                                                            tGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCTTTAGCCAACTGAATTCTGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAatattata                                                                                     >  1:2906771/1‑150 (MQ=255)
                                                                   ggCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTc                                                                              <  1:1911619/150‑1 (MQ=255)
                                                                      gAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGta                                                                           <  2:1276215/150‑1 (MQ=255)
                                                                            gACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAAttt                                                                     >  1:3700579/1‑150 (MQ=255)
                                                                            gACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAAttt                                                                     >  2:1793490/1‑150 (MQ=255)
                                                                            gACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAAttt                                                                     >  2:3686638/1‑150 (MQ=255)
                                                                              cTGAGGAAGTAGATGCAACTGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTgg                                                                   <  2:2676169/150‑1 (MQ=255)
                                                                                gAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCg                                                                 <  2:781371/150‑1 (MQ=255)
                                                                                 aggaaggaGATGCAAATGGCAATGTCACACTACACTTTTGTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGt                                                                <  2:1943427/150‑1 (MQ=255)
                                                                                   gAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAg                                                              >  2:1589832/1‑150 (MQ=255)
                                                                                     aGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTc                                                            >  2:2664954/1‑150 (MQ=255)
                                                                                     aGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTc                                                            >  1:3164241/1‑150 (MQ=255)
                                                                                      gTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCg                                                           >  1:1018303/1‑150 (MQ=255)
                                                                                        aGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGAt                                                         >  1:3783088/1‑150 (MQ=255)
                                                                                          aTGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATaa                                                       >  1:1663691/1‑150 (MQ=255)
                                                                                             cAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGct                                                    >  1:1472082/1‑150 (MQ=255)
                                                                                             cAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGct                                                    >  1:2956170/1‑150 (MQ=255)
                                                                                               aaTGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGctct                                                  <  2:2777012/150‑1 (MQ=255)
                                                                                                  ggCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACa                                               <  2:2494442/150‑1 (MQ=255)
                                                                                                    cAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAAt                                             <  1:1279642/150‑1 (MQ=255)
                                                                                                     aaTGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAAtt                                            >  1:2911725/1‑150 (MQ=255)
                                                                                                       tGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGTCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGa                                          >  1:505346/1‑150 (MQ=255)
                                                                                                         tCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAAt                                        <  2:1102267/150‑1 (MQ=255)
                                                                                                          cacaCTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATg                                       >  2:1263219/1‑150 (MQ=255)
                                                                                                          cacaCTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATg                                       <  2:3316188/150‑1 (MQ=255)
                                                                                                           acacTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGc                                      <  2:2594503/150‑1 (MQ=255)
                                                                                                            cacTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCa                                     >  1:2581467/1‑150 (MQ=255)
                                                                                                            cacTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCa                                     >  1:309118/1‑150 (MQ=255)
                                                                                                             acTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCaa                                    >  2:857179/1‑150 (MQ=255)
                                                                                                             acTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCaa                                    >  2:2019311/1‑150 (MQ=255)
                                                                                                                aaaCTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAAcc                                 >  1:1528726/1‑150 (MQ=255)
                                                                                                                 aaCTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCt                                >  2:2215517/1‑150 (MQ=255)
                                                                                                                 aaCTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCt                                <  2:3606282/150‑1 (MQ=255)
                                                                                                                   cTTTTTTGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCTAg                              >  1:2931939/1‑150 (MQ=255)
                                                                                                                      ttttGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCTAGCtt                           <  2:973591/150‑1 (MQ=255)
                                                                                                                      ttttGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCTAGCtt                           <  2:3020167/150‑1 (MQ=255)
                                                                                                                         tGCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCTGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCTAGCTTGcc                        >  2:2956487/1‑150 (MQ=255)
                                                                                                                          gCCAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCTAGCTTGCCa                       <  2:1045604/150‑1 (MQ=255)
                                                                                                                           ccAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCTAGCTTGCCAt                      >  2:316192/1‑150 (MQ=255)
                                                                                                                            cAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCTAGCTTGCCATa                     >  1:2673573/1‑150 (MQ=255)
                                                                                                                            cAATTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCTAGCTTGCCATa                     >  1:2673414/1‑150 (MQ=255)
                                                                                                                              aTTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCTAGCTTGCCATaaa                   >  2:3201237/1‑150 (MQ=255)
                                                                                                                              aTTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCTAGCTTGCCATaaa                   >  1:2494132/1‑150 (MQ=255)
                                                                                                                              aTTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCTAGCTTGCCATaaa                   >  2:884879/1‑150 (MQ=255)
                                                                                                                              aTTATCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCTAGCTTGCCATaaa                   >  2:1713871/1‑150 (MQ=255)
                                                                                                                                  tCGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCTAGCTTGCCATAAATAtt               <  2:3353431/150‑1 (MQ=255)
                                                                                                                                   cGAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCTAGCTTGCCATAAATATTa              <  2:403305/150‑1 (MQ=255)
                                                                                                                                    gAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCTAGCTTGCCATAAATATTAg             <  2:2559049/150‑1 (MQ=255)
                                                                                                                                    gAGCGTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCTAGCTTGCCATAAATATTAg             >  1:1507169/1‑150 (MQ=255)
                                                                                                                                        gTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCTAGCTTGCCATAAATATTAGAttt         >  1:1140271/1‑150 (MQ=255)
                                                                                                                                        gTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCTAGCTTGCCATAAATATTAGAttt         >  1:1140261/1‑150 (MQ=255)
                                                                                                                                        gTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCTAGCTTGCCATAAATATTAGAttt         >  2:684334/1‑150 (MQ=255)
                                                                                                                                        gTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCTAGCTTGCCATAAATATTAGAttt         >  1:3028522/1‑150 (MQ=255)
                                                                                                                                        gTTAGCCAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCTAGCTTGCCATAAATATTAGAttt         >  2:1169308/1‑150 (MQ=255)
                                                                                                                                             ccAGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCTAGCTTGCCATAAATATTAGATTTATgcg    <  1:3277153/150‑1 (MQ=255)
                                                                                                                                               aGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCTAGCTTGCCATAAATATTAGATTTATGCGCa  >  1:753094/1‑150 (MQ=255)
                                                                                                                                               aGCTGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCTAGCTTGCCATAAATATTAGATTTATGCGCa  >  1:915649/1‑150 (MQ=255)
                                                                                                                                                  |                                                                                                                                                  
CCGCAATGGCACAAACCGTCGCCATCGAATTACGTAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCGGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAATATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCTAGCTTGCCATAAATATTAGATTTATGCGCA  >  CP009273/559099‑559391

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑