| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 54,429 | A→C | S92A (TCC→GCC) | surA ← | peptidyl‑prolyl cis‑trans isomerase (PPIase) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 54,429 | 0 | A | C | 99.6% | 933.4 / ‑5.4 | 236 | S92A (TCC→GCC) | surA | peptidyl‑prolyl cis‑trans isomerase (PPIase) |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base C (114/121); total (115/121) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.87e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 237 total aligned reads displayed.
CTTCAGAGATAATCATCTCTTTGCGGATCTGGTTACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCGCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGAGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCAT > CP009273/54282‑54575 | cTTCAGAGATAATCATCTCTTTGCGGATCTGGTTACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGgcga > 2:3678755/1‑150 (MQ=255) ttCAGAGATAATCATCTCTTTGCGGATCTGGTTACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGAt < 2:2466134/150‑1 (MQ=255) aTAATCATCTCTTTGCGGATCTGGTTACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACt > 2:3336537/1‑150 (MQ=255) tAATCATCTCTTTGCGGATCTGGTTACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACta < 1:412082/150‑2 (MQ=255) aaTCATCTCTTTGCGGATCTGGTTACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTcc > 2:2141340/1‑150 (MQ=255) aaTCATCTCTTTGCGGATCTGGTTACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTcc > 1:1776830/1‑150 (MQ=255) tcatcTCTTTGCGGATCTGGTTACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCa < 1:2183276/150‑1 (MQ=255) catcTCTTTGCGGATCTGGTTACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCAt < 1:1955314/150‑1 (MQ=255) atcTCTTTGCGGATCTGGTTACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCAtt < 2:1819327/150‑1 (MQ=255) ctctTTGCGGATCTGGTTACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCAtttt < 1:2405587/150‑1 (MQ=255) ctctTTGCGGATCTGGTTACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCAtttt < 2:3629379/150‑1 (MQ=255) ctctTTGCGGATCTGGTTACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCAtttt < 1:458689/150‑1 (MQ=255) ctTTGCGGATCTGGTTACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCt < 1:1700819/150‑1 (MQ=255) ctTTGCGGATCTGGTTACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCt < 2:1647490/150‑1 (MQ=255) ttGCGGATCTGGTTACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGc < 2:1416037/150‑1 (MQ=255) tGCGGATCTGGTTACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGcc < 2:3037244/150‑1 (MQ=255) gCGGATCTGGTTACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGccc < 1:1009364/150‑1 (MQ=255) gCGGATCTGGTTACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGccc < 1:1304705/150‑1 (MQ=255) cGGATCTGGTTACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGcccc < 2:1043132/150‑1 (MQ=255) cGGATCTGGTTACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGcccc > 2:3187149/1‑150 (MQ=255) ggATCTGGTTACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCAGGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCa > 2:3780102/1‑150 (MQ=255) gATCTGGTTACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCAt < 2:290113/150‑1 (MQ=255) gATCTGGTTACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCAt > 1:3019670/1‑150 (MQ=255) aTCTGGTTACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATc > 2:1710500/1‑150 (MQ=255) aTCTGGTTACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGAACCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATc > 1:965580/1‑150 (MQ=255) tCTGGTTACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCt < 2:3145925/150‑1 (MQ=255) ttACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAgg < 1:2819007/150‑1 (MQ=255) ttACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAgg < 2:3234889/150‑1 (MQ=255) aCGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGgat < 1:3014252/150‑1 (MQ=255) aCGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGgat > 2:3587806/1‑150 (MQ=255) cGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGgatg > 2:902173/1‑150 (MQ=255) gATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGgatga < 2:1265824/150‑1 (MQ=255) aTAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGgatgat > 1:716264/1‑150 (MQ=255) tAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGAtt < 1:983863/150‑1 (MQ=255) aGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGAttt < 2:2811941/150‑1 (MQ=255) ggTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTg > 1:2894211/1‑150 (MQ=255) gtgtTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGa > 1:1568716/1‑150 (MQ=255) tgtAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCa < 1:3113239/150‑1 (MQ=255) aGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGa < 1:52761/150‑1 (MQ=255) gTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGAt > 2:2302716/1‑150 (MQ=255) aGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCaaa > 1:732408/1‑150 (MQ=255) gTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAAc < 1:598169/150‑1 (MQ=255) cATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGtt > 1:1071563/1‑150 (MQ=255) aTCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTc > 1:2837210/1‑150 (MQ=255) aTCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTc > 2:3541097/1‑150 (MQ=255) tAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATg < 2:3267612/150‑1 (MQ=255) ccAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGAttt < 1:2024744/150‑1 (MQ=255) tGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCa > 1:3721043/1‑150 (MQ=255) tGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCa > 1:3449330/1‑150 (MQ=255) gcgcATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAg < 2:770053/150‑1 (MQ=255) cATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAgcgt > 1:1670689/1‑150 (MQ=255) cATCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAgcgt < 2:3465523/150‑1 (MQ=255) tCTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAgcgtcg < 1:2477830/150‑1 (MQ=255) cTGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAgcgtcgc > 1:3558866/1‑150 (MQ=255) tGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAgcgtcgcg > 2:1923483/1‑150 (MQ=255) tGATCCAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAgcgtcgcg > 2:931919/1‑150 (MQ=255) ccAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGtcat < 2:3723199/150‑1 (MQ=255) ccAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGtcat > 1:843097/1‑150 (MQ=255) cAGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGtcatc < 1:744479/150‑1 (MQ=255) aGCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGtcatca < 2:2041376/150‑1 (MQ=255) gCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAg < 2:1887285/150‑1 (MQ=255) gCGTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAg < 2:369973/150‑1 (MQ=255) gTCATGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGa > 1:152424/1‑150 (MQ=255) gTCACGTTGTTCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGa > 1:2619587/1‑150 (MQ=255) gttgttCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTtg < 1:1225513/150‑1 (MQ=255) tCTGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCtgcc > 2:3218057/1‑150 (MQ=255) tGTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCtgcctt > 2:2864265/1‑150 (MQ=255) gTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCtgccttg > 2:2186864/1‑150 (MQ=255) gTTTCTCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCtgccttg < 2:2709449/150‑1 (MQ=255) tctcgATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCtgccttgcct > 2:294245/4‑150 (MQ=255) ctcgATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTg < 1:3779880/148‑1 (MQ=255) cgATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGag > 1:1376252/1‑150 (MQ=255) aTGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGagca > 1:1765903/1‑150 (MQ=255) aTGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGagca > 1:1200718/1‑150 (MQ=255) aTGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGagca < 1:187982/150‑1 (MQ=255) aTGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGagca > 2:2505026/1‑150 (MQ=255) aTGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGagca < 2:598409/150‑1 (MQ=255) aTGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGagca > 1:2795981/1‑150 (MQ=255) tGTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGagcag > 1:652986/1‑150 (MQ=255) gTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGagcagc < 1:1852689/150‑1 (MQ=255) gTTAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCC‑GAGCAGCg < 2:854310/150‑1 (MQ=255) tAGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGAGCAGCGt > 2:1189162/1‑150 (MQ=255) aGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGAGCAGCGtt > 1:811193/1‑150 (MQ=255) aGCAATCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGAGCAGCGtt < 1:3650353/150‑1 (MQ=255) aaTCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGAGCAGCGTTCAg < 1:3634742/150‑1 (MQ=255) aaTCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGAGCAGCGTTCAg > 2:2772139/1‑150 (MQ=255) aaTCGCCTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGAGCAGCGTTCAg > 1:1005224/1‑150 (MQ=255) ccTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTa > 1:2575308/1‑150 (MQ=255) cTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTAc > 2:1959840/1‑150 (MQ=255) cTGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTAc > 2:761774/1‑150 (MQ=255) tGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTAcc < 1:3218487/150‑1 (MQ=255) tGATCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTAcc > 2:2964914/1‑150 (MQ=255) aTCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGa < 2:3313155/150‑1 (MQ=255) aTCCAGCTGCTCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGa < 1:3336537/150‑1 (MQ=255) tCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAAt > 2:2205671/1‑150 (MQ=255) tCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAAt > 2:3783773/1‑150 (MQ=255) tCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAAt < 2:1397168/150‑1 (MQ=255) tCATCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAAt < 2:2638835/150‑1 (MQ=255) aTCGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATcc > 2:562579/1‑150 (MQ=255) cGGCGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCAt > 2:487072/1‑150 (MQ=255) | CTTCAGAGATAATCATCTCTTTGCGGATCTGGTTACGATAGGTGTTGTAGTTCAGTCCATCGTAAGCCAGACGGCTGCGCATCTGATCCAGCGTCATGTTGTTCTGTTTCGCGATGTTAGCAATCGCCTGATCCAGCTGCTCATCGGAGATTTTCACTCCCATTTTCTGCCCCATCTGCAGGATGATTTGATCCATGATCAAACGTTCCATGATTTGGTGGCGCAGCGTCGCGTCATCAGGAAGTTGCTGCCTTGCCTGAGCAGCGTTCAGTTTTACCGACTGCATTAATCCAT > CP009273/54282‑54575 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |