BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009273	579,692	G→A	D186N (GAT→AAT)	appY →	global transcriptional activator; DLP12 prophage

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	579,692	0	G	A	100.0%	625.8 / NA	190	D186N (GAT→AAT)	appY	global transcriptional activator; DLP12 prophage
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (100/90); total (100/90)

Only 100 of 192 total aligned reads displayed.

TTACCTGTAAAATTACTGGAATAATCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTAAAGATTATTATGGTGTCACGCCATCTCATTATTTT  >  CP009273/579546‑579838

ttACCTGTAAAATTACTGGAATAATCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATa                                                                                                                                                 <  2:2058279/150‑1 (MQ=255)

 tACCTGTAAAATTACTGGAATAATCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATAc                                                                                                                                                <  1:1838245/150‑1 (MQ=255)

  aCCTGTAAAATTACTGGAATAATCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACt                                                                                                                                               >  2:3589519/1‑150 (MQ=255)

  aCCTGTAAAATTACTGGAATAATCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACt                                                                                                                                               >  1:3185352/1‑150 (MQ=255)

    cTGTAAAATTACTGGAATAATCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAg                                                                                                                                             <  1:1862239/150‑1 (MQ=255)

    cTGTAAAATTAATGGAATAATCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAg                                                                                                                                             <  2:1319820/150‑1 (MQ=255)

      gTAAAATTACTGGAATAATCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGa                                                                                                                                           <  2:1355749/150‑1 (MQ=255)

      gTAAAATTACTGGAATAATCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGa                                                                                                                                           <  2:602420/150‑1 (MQ=255)

        aaaaTTACTGGAATAATCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATg                                                                                                                                         >  2:2102885/1‑150 (MQ=255)

          aaTTACTGGAATAATCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAg                                                                                                                                       >  1:7710/1‑150 (MQ=255)

           aTTACTGGAATAATCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCTGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAATGGATGAATTAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAgg                                                                                                                                      >  1:2135870/1‑150 (MQ=255)

            ttACTGGAATAATCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGt                                                                                                                                     <  2:1691307/150‑1 (MQ=255)

             tACTGGAATAATCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTa                                                                                                                                    >  2:2986963/1‑150 (MQ=255)

             tACTGGAATAATCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTa                                                                                                                                    >  2:2986951/1‑150 (MQ=255)

              aCTGGAATAATCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTAt                                                                                                                                   <  1:1063130/150‑1 (MQ=255)

                    ataatCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCaaaa                                                                                                                             >  1:3309242/1‑150 (MQ=255)

                     taatCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCaaaaa                                                                                                                            >  2:845009/1‑150 (MQ=255)

                      aatCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCaaaaaa                                                                                                                           >  2:1168691/1‑150 (MQ=255)

                      aatCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCaaaaaa                                                                                                                           >  2:2250973/1‑150 (MQ=255)

                         cAGTTTTAATATTTATCGTCAATGGCATTTAATAGATATTGCGGTATTGATTTATACGAGTTAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACt                                                                                                                        <  2:2135870/150‑1 (MQ=255)

                               tAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAAc                                                                                                                  >  1:622415/1‑150 (MQ=255)

                                 atatTGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACtt                                                                                                                >  1:417457/1‑150 (MQ=255)

                                   atTGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCa                                                                                                              >  2:371962/1‑150 (MQ=255)

                                     tGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCaaa                                                                                                            >  2:2660678/1‑150 (MQ=255)

                                     tGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCaaa                                                                                                            >  1:3621632/1‑150 (MQ=255)

                                      gAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAAc                                                                                                           <  1:1520057/150‑1 (MQ=255)

                                       aGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAAct                                                                                                          >  2:3266728/1‑150 (MQ=255)

                                       aGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAAct                                                                                                          >  1:306102/1‑150 (MQ=255)

                                         cGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAActct                                                                                                        >  1:476663/1‑150 (MQ=255)

                                          ggCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCtt                                                                                                       >  1:2986559/1‑150 (MQ=255)

                                          ggCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCtt                                                                                                       <  2:3204851/150‑1 (MQ=255)

                                          ggCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCtt                                                                                                       <  1:402654/150‑1 (MQ=255)

                                            cAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTAt                                                                                                     >  1:2238420/1‑150 (MQ=255)

                                            cAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTAt                                                                                                     >  1:1791558/1‑150 (MQ=255)

                                            cAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTAt                                                                                                     <  1:3440748/150‑1 (MQ=255)

                                             aaTGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTAtt                                                                                                    >  1:1075965/1‑150 (MQ=255)

                                                ggCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTa                                                                                                 <  1:1726270/150‑1 (MQ=255)

                                                   aTTTAAAAGATAGTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCa                                                                                              <  1:1253100/150‑1 (MQ=255)

                                                    tttAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCaa                                                                                             >  2:1749034/1‑150 (MQ=255)

                                                     ttAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAAt                                                                                            <  2:782222/150‑1 (MQ=255)

                                                       aaaaGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGt                                                                                          <  2:111178/150‑1 (MQ=255)

                                                         aaGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCg                                                                                        >  2:1927520/1‑150 (MQ=255)

                                                           gATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTa                                                                                      >  2:78864/1‑150 (MQ=255)

                                                           gATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTa                                                                                      >  2:3326147/1‑150 (MQ=255)

                                                                tGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCa                                                                                 <  2:1794757/150‑1 (MQ=255)

                                                                tGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCa                                                                                 <  2:2905832/150‑1 (MQ=255)

                                                                 gCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAg                                                                                <  2:2954712/150‑1 (MQ=255)

                                                                   ggAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGaa                                                                              >  1:113763/1‑150 (MQ=255)

                                                                   ggAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGaa                                                                              >  1:2024525/1‑150 (MQ=255)

                                                                     aaTTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAAt                                                                            >  2:553033/1‑150 (MQ=255)

                                                                      aTTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAAtg                                                                           <  1:2102885/150‑1 (MQ=255)

                                                                      aTTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAAtg                                                                           >  1:1764882/1‑150 (MQ=255)

                                                                          aTTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGc                                                                       >  2:413892/1‑150 (MQ=255)

                                                                             tataCGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCtat                                                                    <  2:1378476/150‑1 (MQ=255)

                                                                             tataCGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCtat                                                                    <  1:2689888/150‑1 (MQ=255)

                                                                              ataCGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCtata                                                                   >  2:2800876/1‑150 (MQ=255)

                                                                              ataCGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCtata                                                                   >  2:3220930/1‑150 (MQ=255)

                                                                                aCGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAAc                                                                 >  2:14991/1‑150 (MQ=255)

                                                                                 cGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACa                                                                <  2:1445035/150‑1 (MQ=255)

                                                                                    gTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTa                                                             >  2:885730/1‑150 (MQ=255)

                                                                                     tGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTAc                                                            >  1:3314059/1‑150 (MQ=255)

                                                                                        aaGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACttc                                                         >  1:3097269/1‑150 (MQ=255)

                                                                                           tttAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACttcata                                                      >  1:970612/1‑150 (MQ=255)

                                                                                            ttAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACttcatat                                                     <  1:371962/150‑1 (MQ=255)

                                                                                            ttAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACttcatat                                                     <  1:2575334/150‑1 (MQ=255)

                                                                                                taaAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACttcatatttca                                                 >  2:3641516/1‑150 (MQ=255)

                                                                                                   aaaaaaGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACttcatatttcatat                                              <  2:160102/150‑1 (MQ=255)

                                                                                                   aaaaaaGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACttcatatttcatat                                              <  2:3108726/150‑1 (MQ=255)

                                                                                                      aaaGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATAtgtg                                           <  2:234178/150‑1 (MQ=255)

                                                                                                         gATTAATGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCAt                                        <  2:2531668/150‑1 (MQ=255)

                                                                                                          aTTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCAtt                                       >  1:117854/1‑150 (MQ=255)

                                                                                                          aTTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCAtt                                       <  1:2618728/150‑1 (MQ=255)

                                                                                                           ttAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCAttt                                      >  1:3594595/1‑150 (MQ=255)

                                                                                                             aaGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTaa                                    <  1:3049475/150‑1 (MQ=255)

                                                                                                             aaGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTaa                                    <  1:3049347/150‑1 (MQ=255)

                                                                                                              aGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTaaa                                   >  2:1061549/1‑150 (MQ=255)

                                                                                                              aGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTaaa                                   >  1:1776/1‑150 (MQ=255)

                                                                                                              aGGGATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGAATTTaat                                   >  2:1999057/1‑149 (MQ=255)

                                                                                                                ggATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTAAAGa                                 <  2:3534750/150‑1 (MQ=255)

                                                                                                                 gATGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCAAATTTCATATGTGCATTTAAAGat                                >  1:2755753/1‑150 (MQ=255)

                                                                                                                   tGAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTAAAGatta                              >  1:2322094/1‑150 (MQ=255)

                                                                                                                    gAAGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTAAAGattat                             <  2:3309242/150‑1 (MQ=255)

                                                                                                                     aaGGAACGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTAAAGattatt                            >  1:1438544/1‑150 (MQ=255)

                                                                                                                          aCGTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTAAAGATTATTATGgt                       <  1:3326147/150‑1 (MQ=255)

                                                                                                                           cttCATTTACTGAAATATTGAGAAATACTATGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCATAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTAAAGATTATTATGgtg                      <  1:78864/148‑1 (MQ=255)

                                                                                                                            gTCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTAAAGATTATTATGgtgt                     >  2:2236618/1‑150 (MQ=255)

                                                                                                                             tCATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTAAAGATTATTATGGTGTc                    >  1:668266/1‑150 (MQ=255)

                                                                                                                              cATTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTAAAGATTATTATGGTGTCa                   >  2:2482363/1‑150 (MQ=255)

                                                                                                                               aTTTACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACATCAAACTCTTATTCTATGAATTTCGTAGCCCAGAAATGTGGCTATTACAGTACTTCATATTTCATATGTGCATTTAAAGATTATTATGGTGTAAc                  >  2:3768038/1‑150 (MQ=255)

                                                                                                                                 ttACTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAATACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTAAAGATTATTATGGTGTCACGc                >  1:547446/1‑150 (MQ=255)

                                                                                                                                   aCTGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTAAAGATTATTATGGTGTCACGCCa              >  2:1876523/1‑150 (MQ=255)

                                                                                                                                     tGAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTAAAGATTATTATGGTGTCACGCCAtc            >  2:503152/1‑150 (MQ=255)

                                                                                                                                      gAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTAAAGATTATTATGGTGTCACGCCAtct           >  2:709127/1‑150 (MQ=255)

                                                                                                                                      gAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTAAAGATTATTATGGTGTCACGCCAtct           <  1:2986963/150‑1 (MQ=255)

                                                                                                                                      gAAATATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTAAAGATTATTATGGTGTCACGCCAtct           >  1:1905346/1‑150 (MQ=255)

                                                                                                                                       aaaTATTGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTAAAGATTATTATGGTGTCACGCCAtctc          >  2:2651754/1‑150 (MQ=255)

                                                                                                                                            ttGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTAAAGATTATTATGGTGTCACGCCATCTCattat     <  1:3589123/150‑1 (MQ=255)

                                                                                                                                             tGAGAAATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTAAAGATTATTATGGTGTCACGCCATCTCattatt    <  2:3678179/150‑1 (MQ=255)

                                                                                                                                              gagaaaTACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTAAAGATTATTATGGTGTCACGCCATCTCATTAttt   >  2:692601/1‑150 (MQ=255)

                                                                                                                                               agaaaTACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTAAAGATTATTATGGTGTCACGCCATCTCATTAtttt  >  2:3492730/1‑150 (MQ=255)

TTACCTGTAAAATTACTGGAATAATCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTAAAGATTATTATGGTGTCACGCCATCTCATTATTTT  >  CP009273/579546‑579838

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`