BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009273	955,568	A→T	intergenic (+17/‑152)	aroA → / → ycaL	5‑enolpyruvylshikimate‑3‑phosphate synthetase/putative peptidase‑related chaperone

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	955,568	0	A	T	100.0%	572.8 / NA	170	intergenic (+17/‑152)	aroA/ycaL	5‑enolpyruvylshikimate‑3‑phosphate synthetase/putative peptidase‑related chaperone
Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (64/106); total (64/106)

Only 100 of 175 total aligned reads displayed.

CCGGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATAAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAATCAACGGATGA  >  CP009273/955422‑955714

 cGGATGGCGTTGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGTCGATTCTTGATCCCAAATGCACGGCCAAAACATGTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCaattaata                                                                                                                                                 <  2:302248/150‑1 (MQ=255)

  ggATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAg                                                                                                                                                >  1:131756/1‑150 (MQ=255)

  ggATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAg                                                                                                                                                >  1:2678152/1‑150 (MQ=255)

     tGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCa                                                                                                                                             >  2:1806865/1‑150 (MQ=255)

         gATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAtc                                                                                                                                         >  1:1554220/1‑150 (MQ=255)

           tgtgTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAtctt                                                                                                                                       <  2:830110/150‑1 (MQ=255)

           tgtgTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAtctt                                                                                                                                       <  1:1363675/150‑1 (MQ=255)

           tgtgTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAtctt                                                                                                                                       <  2:830106/150‑1 (MQ=255)

             tgtTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAAtctttc                                                                                                                                     >  2:199980/1‑150 (MQ=255)

                 tctcGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTa                                                                                                                                 <  2:1838199/150‑1 (MQ=255)

                  ctcGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTAt                                                                                                                                <  2:310008/150‑1 (MQ=255)

                   tcGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATc                                                                                                                               <  1:257042/150‑1 (MQ=255)

                     gCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCaa                                                                                                                             <  1:1403871/150‑1 (MQ=255)

                        ggtggCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAAc                                                                                                                          >  1:3730042/1‑150 (MQ=255)

                            gCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCg                                                                                                                      <  2:3439843/150‑1 (MQ=255)

                              gTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGc                                                                                                                    <  2:1155578/150‑1 (MQ=255)

                                 gTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGcaca                                                                                                                 >  1:1613422/1‑150 (MQ=255)

                                 gTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGcaca                                                                                                                 <  1:70052/150‑1 (MQ=255)

                                      aTACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTc                                                                                                            <  2:3538336/150‑1 (MQ=255)

                                      aTACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTc                                                                                                            >  2:1050551/1‑150 (MQ=255)

                                       tACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCg                                                                                                           <  2:965060/150‑1 (MQ=255)

                                            cAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCAAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑tt                                                                                                     <  1:392544/150‑1 (MQ=255)

                                             aGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCGCATTGTCGGCG‑ttt                                                                                                    <  2:2843506/150‑1 (MQ=255)

                                               tGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑ttttt                                                                                                  <  2:209264/150‑1 (MQ=255)

                                               tGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑ttttt                                                                                                  <  2:208341/150‑1 (MQ=255)

                                                gACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑tttttt                                                                                                 >  1:1990460/1‑150 (MQ=255)

                                                   gATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCCGGCAGCCTGAATGAACAACGAGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTc                                                                                              >  1:1709007/1‑150 (MQ=255)

                                                     ttCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑ttttttttaag                                                                                            >  1:2904592/1‑147 (MQ=255)

                                                     ttCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCgg                                                                                            >  1:1003634/1‑150 (MQ=255)

                                                     ttCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTAgg                                                                                            >  1:1003478/1‑150 (MQ=255)

                                                      tCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGa                                                                                           <  2:18847/150‑1 (MQ=255)

                                                         tGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTAGGACCt                                                                                        >  1:728068/1‑150 (MQ=255)

                                                          gATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCtt                                                                                       <  2:359715/150‑1 (MQ=255)

                                                          gATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCtt                                                                                       <  2:2267454/150‑1 (MQ=255)

                                                                aaaTGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGt                                                                                 <  1:2337213/150‑1 (MQ=255)

                                                                aaaTGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGt                                                                                 >  1:1593255/1‑150 (MQ=255)

                                                                  aTGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCa                                                                               <  2:2508534/150‑1 (MQ=255)

                                                                     cACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCGTTTTTTTTTCGGACCTTGTGAGTCAtt                                                                             <  2:2992617/150‑1 (MQ=255)

                                                                     cACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCAttt                                                                            >  2:2697292/1‑150 (MQ=255)

                                                                      aCGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCAtttt                                                                           <  2:863549/150‑1 (MQ=255)

                                                                      aCGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCAtttt                                                                           <  2:476944/150‑1 (MQ=255)

                                                                          ccAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATTGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGAtt                                                                       <  1:3279501/150‑1 (MQ=255)

                                                                          ccAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGAtt                                                                       <  2:1496881/150‑1 (MQ=255)

                                                                          ccAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGAtt                                                                       <  2:2341871/150‑1 (MQ=255)

                                                                           cAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTa                                                                      <  2:2937879/150‑1 (MQ=255)

                                                                           cAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTa                                                                      <  2:2937908/150‑1 (MQ=255)

                                                                               aCATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTAAGTCATTTTGATTAATgg                                                                  <  1:3366834/150‑1 (MQ=255)

                                                                                cATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGt                                                                 >  2:3768710/1‑150 (MQ=255)

                                                                                 aTTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTa                                                                <  1:569526/150‑1 (MQ=255)

                                                                                   ttCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGc                                                              >  2:3121564/1‑150 (MQ=255)

                                                                                     ccGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCAATTTGATTAATGGTAGCGt                                                            >  1:2353866/1‑150 (MQ=255)

                                                                                     ccGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTAGGACCATGTGAGTCATTTTTATTAATTGTAGCGt                                                            >  1:2673419/1‑150 (MQ=255)

                                                                                      cGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTc                                                           <  2:1613422/150‑1 (MQ=255)

                                                                                      cGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTc                                                           <  1:934231/150‑1 (MQ=255)

                                                                                      cGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTc                                                           <  1:2723243/150‑1 (MQ=255)

                                                                                      cGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTc                                                           <  1:954679/150‑1 (MQ=255)

                                                                                      cGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTc                                                           <  1:2954177/150‑1 (MQ=255)

                                                                                        gATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGc                                                         >  1:2118736/1‑150 (MQ=255)

                                                                                         attattTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCAGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCt                                                        >  1:3746870/1‑150 (MQ=255)

                                                                                          ttattTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACAGTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCtt                                                       >  1:2812473/1‑150 (MQ=255)

                                                                                            attTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGt                                                     >  1:3387151/1‑150 (MQ=255)

                                                                                            attTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTAATTTTGATTAATGGTAGCGTCGCTTGt                                                     >  1:458789/1‑150 (MQ=255)

                                                                                              ttCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACCTTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCa                                                   >  2:2732334/1‑150 (MQ=255)

                                                                                              ttCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATGTTGATTAATGGTAGCGTCGCTGGTCa                                                   >  2:2732395/1‑150 (MQ=255)

                                                                                                 gAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCATGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATg                                                >  1:568954/1‑150 (MQ=255)

                                                                                                  agcagcTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCATGTGAGTCATTTTTATTAATGGTATCGTCGCTTGTAAAttt                                               >  1:1993658/1‑148 (MQ=255)

                                                                                                    cagcTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTaa                                             <  1:1215063/150‑1 (MQ=255)

                                                                                                    cagcTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTAGGACCTTGTGAGTCAATTTGATTAATGGTAGCGTAGCTTGTAAATGTaa                                             >  1:488361/1‑150 (MQ=255)

                                                                                                       cTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAgtt                                          <  2:665263/150‑1 (MQ=255)

                                                                                                        tGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAgttg                                         <  2:2851272/150‑1 (MQ=255)

                                                                                                           cgcgGATTTGCCAGGCTGTTTGAATGAACATCGGGCAATTAATTGCCTAATCTTTCTTTATCATAACGTCGGCTTTTTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCTTTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGttgttg                                      <  1:3136149/150‑1 (MQ=255)

                                                                                                           cgcgGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGttgttg                                      <  1:2697431/150‑1 (MQ=255)

                                                                                                           cgcgGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTAGGACCATGTGAGTAAATTTGTTTAATTGTATCGTCGCTTGTAAAATTAAAtttttg                                      >  1:1647501/1‑150 (MQ=255)

                                                                                                             cgGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGAt                                    <  2:2427189/150‑1 (MQ=255)

                                                                                                             cgGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGAt                                    <  2:1362402/150‑1 (MQ=255)

                                                                                                              ggATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATa                                   <  1:1547313/150‑1 (MQ=255)

                                                                                                               gATTAGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATAc                                  <  1:601429/150‑1 (MQ=255)

                                                                                                                   aGCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACataa                              <  1:2321607/150‑1 (MQ=255)

                                                                                                                    gCCAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACataat                             <  1:928967/150‑1 (MQ=255)

                                                                                                                     ccAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACataata                            <  2:318508/150‑1 (MQ=255)

                                                                                                                      cAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAatat                           <  2:2705080/150‑1 (MQ=255)

                                                                                                                      cAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAatat                           >  2:562452/1‑150 (MQ=255)

                                                                                                                      cAGGCAGCCTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAatat                           <  1:2430457/150‑1 (MQ=255)

                                                                                                                              cTGAATGAACAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTatatat                   >  2:703547/1‑150 (MQ=255)

                                                                                                                                  atgaaCAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGAtt               <  2:1471404/150‑1 (MQ=255)

                                                                                                                                  atgaaCAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGAtt               <  2:3330079/150‑1 (MQ=255)

                                                                                                                                  atgaaCAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGAtt               <  1:2766257/150‑1 (MQ=255)

                                                                                                                                  atgaaCAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGAtt               <  2:1317364/150‑1 (MQ=255)

                                                                                                                                    gaaCAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATTATTaa             >  2:201935/1‑150 (MQ=255)

                                                                                                                                    gaaCAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTaa             <  1:3017438/150‑1 (MQ=255)

                                                                                                                                    gaaCAACGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTaa             >  2:1728434/1‑150 (MQ=255)

                                                                                                                                     aacaacGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTGGTCAATGTAAGTTGTTTATACATAATATTTATATATGATTAAt            >  2:3482956/1‑150 (MQ=255)

                                                                                                                                      acaacGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAAta           >  2:3460676/1‑149 (MQ=255)

                                                                                                                                       caacGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAATCa          <  2:3699313/150‑1 (MQ=255)

                                                                                                                                        aacGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAATCaa         <  1:2795407/150‑1 (MQ=255)

                                                                                                                                        aacGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAATCaa         <  2:60032/150‑1 (MQ=255)

                                                                                                                                        aacGGGCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAATCaa         <  2:1593255/150‑1 (MQ=255)

                                                                                                                                             gCAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAATCAACGgat    >  2:1873144/1‑150 (MQ=255)

                                                                                                                                              cAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAATCAACGgatg   <  2:1768395/150‑1 (MQ=255)

                                                                                                                                              cAATTAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAATCAACGgatg   >  1:311172/1‑150 (MQ=255)

CCGGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGAATGAACAACGGGCAATAAATAGCCAAATCTTTCTTTATCAAAACGTCGGCACATTGTCGGCG‑TTTTTTTTCGGACCTTGTGAGTCATTTTGATTAATGGTAGCGTCGCTTGTCAATGTAAGTTGTTGATACATAATATTTATATATGATTAATCAACGGATGA  >  CP009273/955422‑955714

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`