Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009273 1,131,521 C→A Q168K (CAG→AAG)  flgH → flagellar protein of basal‑body outer‑membrane L ring

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092731,131,5210CA100.0% 493.5 / NA 149Q168K (CAG→AAG) flgHflagellar protein of basal‑body outer‑membrane L ring
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (58/91);  total (58/91)

Only 100 of 154 total aligned reads displayed.

ACGCTCGTGCCGATGTCGAAGCCTCCGGTGGTAACACGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAACAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACCGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCG  >  CP009273/1131375‑1131667
                                                                                                                                                  |                                                                                                                                                  
aCGCTCGTGCCGATGTCGAAGCCTCCGGTGGTAACACGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGa                                                                                                                                                 >  2:912115/1‑150 (MQ=255)
  gCTCGTGCCGATGTCGAAGCCTCCGGTGGTAACACGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGAtt                                                                                                                                               >  1:124173/1‑150 (MQ=255)
  gCTCGTGCCGATGTCGAAGCCTCCGGTGGTAACACGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGAtt                                                                                                                                               <  2:2180462/150‑1 (MQ=255)
   cTCGTGCCGATGTCGAAGCCTCCGGTGGTAACACGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTg                                                                                                                                              <  1:3152776/150‑1 (MQ=255)
     cGTGCCGATGTCGAAGCCTCCGGTGGTAACACGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGcc                                                                                                                                            >  1:159081/1‑150 (MQ=255)
      gTGCCGATGTCGAAGCCTCCGGTGGTAACACGTTCAACGGAGAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCa                                                                                                                                           >  1:2843007/1‑150 (MQ=255)
      gTGCCGATGTCGAAGCCTCCGGTGGTAACACGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGTCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCa                                                                                                                                           <  2:268981/150‑1 (MQ=255)
      gTGCCGATGTCGAAGCCTCCGGTGGTAACACGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTAGACGGTGACAGATGACCAGGTACTGGTCAACGGCAACCTGCATGTGGAGGGTGAAAAAAAGATTGCCa                                                                                                                                           >  1:939482/1‑150 (MQ=255)
             tGTCGAAGCCTCCGGTGGTAACACGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCa                                                                                                                                    <  1:2788375/150‑1 (MQ=255)
             tGTCGAAGCCTCCGGTGGTAACACGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCa                                                                                                                                    <  2:1242963/150‑1 (MQ=255)
              gTCGAAGCCTCCGGTGGTAACACGTTCAACGGAAAGGGCGTGGCCAATGCCAGCAATACCTTTCGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAg                                                                                                                                   <  2:881732/150‑1 (MQ=255)
              gTCGAAGCCTCCGGTGGTAACACGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAg                                                                                                                                   >  1:984460/1‑150 (MQ=255)
              gTCGAAGCCTCCGGTGGTAACACGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAg                                                                                                                                   <  2:2975805/150‑1 (MQ=255)
               tCGAAGCCTCCGGTGGTAACACGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAgg                                                                                                                                  <  1:1017613/150‑1 (MQ=255)
               tCGAAGCCTCCGGTGGTAACACGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAgg                                                                                                                                  <  1:2920914/150‑1 (MQ=255)
               tCGAAGCCTCCGGTGGTAACACGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAgg                                                                                                                                  <  2:655646/150‑1 (MQ=255)
                cGAAGCCTCCGGTGGTAACACGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAggg                                                                                                                                 <  2:3155714/150‑1 (MQ=255)
                  aaGCCTCCGGTGGTAACACGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTa                                                                                                                               <  2:1821308/150‑1 (MQ=255)
                   atccTCCGGTGGTAACACGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTAc                                                                                                                              >  1:1977988/3‑150 (MQ=255)
                   aGCCTCCGGTGGTAACACGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTAc                                                                                                                              <  2:2866806/150‑1 (MQ=255)
                         cGGTGGTAACACGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAAtt                                                                                                                        <  1:38062/150‑1 (MQ=255)
                         cGGTGGTAACACGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAAtt                                                                                                                        <  1:2700977/150‑1 (MQ=255)
                            tggtAACACGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTAt                                                                                                                     >  2:3784459/1‑150 (MQ=255)
                            tggtAACACGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTAt                                                                                                                     <  1:2162527/150‑1 (MQ=255)
                                aaCACGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGc                                                                                                                 <  2:1684639/150‑1 (MQ=255)
                                 acacGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCt                                                                                                                >  2:1319702/1‑150 (MQ=255)
                                    cGTTCATCGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTtct                                                                                                             <  1:2733882/150‑1 (MQ=255)
                                    cGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTtct                                                                                                             <  2:1157945/150‑1 (MQ=255)
                                      ttCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTctct                                                                                                           <  1:2038577/150‑1 (MQ=255)
                                       tCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTg                                                                                                          >  2:820709/1‑150 (MQ=255)
                                        cAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTgg                                                                                                         >  2:979360/1‑150 (MQ=255)
                                         aaCGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGc                                                                                                        >  1:1630465/1‑150 (MQ=255)
                                           cGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGt                                                                                                      <  1:1054896/150‑1 (MQ=255)
                                            ggAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTg                                                                                                     >  1:408996/1‑150 (MQ=255)
                                               aaGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGtt                                                                                                  <  1:2153435/150‑1 (MQ=255)
                                               aaGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGtt                                                                                                  <  2:1443824/150‑1 (MQ=255)
                                                  ggCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAAt                                                                                               <  1:3748451/150‑1 (MQ=255)
                                                   gCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATc                                                                                              <  1:3333135/150‑1 (MQ=255)
                                                           aaTGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACt                                                                                      >  2:3732935/1‑150 (MQ=255)
                                                           aaTGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACt                                                                                      >  2:1189528/1‑150 (MQ=255)
                                                            aTGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTa                                                                                     >  1:3296515/1‑150 (MQ=255)
                                                                cAGCAATACCTTTAGCGGCACGTAGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAAACAGCATGTGGTGGGTGAAAAAAAGATTGCCATAAATCAGGGTACCGAATATATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAg                                                                                 >  2:697354/1‑150 (MQ=255)
                                                                 aGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGc                                                                                >  1:1481700/1‑150 (MQ=255)
                                                                  gCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCg                                                                               <  2:2517485/150‑1 (MQ=255)
                                                                  gCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCg                                                                               <  1:2385539/150‑1 (MQ=255)
                                                                   cAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCgg                                                                              >  2:1920295/1‑150 (MQ=255)
                                                                     aTACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGgca                                                                            >  1:2234341/1‑150 (MQ=255)
                                                                      tACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGgcag                                                                           >  2:2814892/1‑150 (MQ=255)
                                                                           ttAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAAta                                                                      <  1:807475/150‑1 (MQ=255)
                                                                           ttAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAAta                                                                      <  2:3566303/150‑1 (MQ=255)
                                                                                 gCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAAtacagtac                                                                <  1:3065042/150‑1 (MQ=255)
                                                                                       tgacggtgacggTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTa                                                          <  2:3218540/150‑1 (MQ=255)
                                                                                       tgacggtgacggTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTa                                                          >  2:3034046/1‑150 (MQ=255)
                                                                                        gacggtgacggtTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTAc                                                         >  2:1025080/1‑150 (MQ=255)
                                                                                        gacggtgacggtTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTAc                                                         >  1:2194386/1‑150 (MQ=255)
                                                                                         acggtgacggtTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACt                                                        <  1:2536733/150‑1 (MQ=255)
                                                                                         acggtgacggtTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACt                                                        <  2:1258502/150‑1 (MQ=255)
                                                                                          cggtgacggtTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTc                                                       >  1:140471/1‑150 (MQ=255)
                                                                                          cggtgacggtTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTc                                                       <  1:503918/150‑1 (MQ=255)
                                                                                          cggtgacggtTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTc                                                       >  1:140563/1‑150 (MQ=255)
                                                                                           ggtgacggtTGACCAGGTACTGGTCAACGGCATCCTGCATGTGGTGGGTGAAAAAAATATTGCCATTAATCAGGGTACCGAATTTATTCGATTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCa                                                      <  1:2129742/150‑1 (MQ=255)
                                                                                           ggtgacggtTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCa                                                      <  1:1776535/150‑1 (MQ=255)
                                                                                           ggtgacggtTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCa                                                      >  2:1181189/1‑150 (MQ=255)
                                                                                              gacggtTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGt                                                   <  1:1900348/150‑1 (MQ=255)
                                                                                               acggtTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTg                                                  <  1:245958/150‑1 (MQ=255)
                                                                                                 ggtTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGc                                                >  2:643480/1‑150 (MQ=255)
                                                                                                   ttGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCgg                                              >  1:1323621/1‑150 (MQ=255)
                                                                                                     gACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGAt                                            <  1:3691953/150‑1 (MQ=255)
                                                                                                     gACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGAt                                            <  2:2098994/150‑1 (MQ=255)
                                                                                                      aCCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATg                                           <  2:3419032/150‑1 (MQ=255)
                                                                                                       ccAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATgc                                          <  2:2742804/150‑1 (MQ=255)
                                                                                                         aGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATgcgc                                        >  2:896118/1‑150 (MQ=255)
                                                                                                            tACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCa                                     <  2:159081/150‑1 (MQ=255)
                                                                                                              cTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCAtt                                   >  2:3798447/1‑150 (MQ=255)
                                                                                                                  tCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAAt                               <  2:1586139/150‑1 (MQ=255)
                                                                                                                  tCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAAt                               <  2:105410/150‑1 (MQ=255)
                                                                                                                  tCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAAt                               >  1:3679970/1‑150 (MQ=255)
                                                                                                                   catcGGCAACCTGCTTGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATa                              <  2:3513101/147‑1 (MQ=255)
                                                                                                                    aaCGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATAc                             >  2:840433/1‑150 (MQ=255)
                                                                                                                     aCGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACg                            <  1:3790356/150‑1 (MQ=255)
                                                                                                                       ggCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTa                          >  2:3408175/1‑150 (MQ=255)
                                                                                                                       ggCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTa                          >  2:3408183/1‑150 (MQ=255)
                                                                                                                        gCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAg                         <  2:2194386/150‑1 (MQ=255)
                                                                                                                           aCCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCa                      <  1:612158/150‑1 (MQ=255)
                                                                                                                              tGCTTGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATg                   <  2:3589509/150‑1 (MQ=255)
                                                                                                                              tGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATg                   <  1:2386927/150‑1 (MQ=255)
                                                                                                                              tGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAANg                   <  1:1719914/150‑1 (MQ=255)
                                                                                                                                cATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGc                 >  1:3763624/1‑150 (MQ=255)
                                                                                                                                  tgtgGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTa               <  2:2178048/150‑1 (MQ=255)
                                                                                                                                    tggtggGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACa             <  1:3624426/150‑1 (MQ=255)
                                                                                                                                    tggtggGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACa             <  1:3624357/150‑1 (MQ=255)
                                                                                                                                         ggttAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCTGCAGCAATACAGTACCTTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAAc        <  2:2698184/150‑1 (MQ=255)
                                                                                                                                          gtgAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACg       <  2:2538934/150‑1 (MQ=255)
                                                                                                                                           tgAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAActa      >  1:1451504/1‑148 (MQ=255)
                                                                                                                                           tgAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGa      >  2:2926208/1‑150 (MQ=255)
                                                                                                                                            gAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGaa     <  2:1661569/150‑1 (MQ=255)
                                                                                                                                              aaaaaaGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAgc   >  2:3253999/1‑150 (MQ=255)
                                                                                                                                              aaaaaaGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAgc   >  2:1708956/1‑150 (MQ=255)
                                                                                                                                              aaaaaaGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAgc   >  1:751622/1‑150 (MQ=255)
                                                                                                                                               aaaaAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAgcg  <  1:2016853/150‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                  
ACGCTCGTGCCGATGTCGAAGCCTCCGGTGGTAACACGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAACAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACCGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCG  >  CP009273/1131375‑1131667

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑