Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009273 1,131,601 C→A T194T (ACC→ACA)  flgH → flagellar protein of basal‑body outer‑membrane L ring

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092731,131,6010CA100.0% 707.0 / NA 216T194T (ACC→ACA) flgHflagellar protein of basal‑body outer‑membrane L ring
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (129/87);  total (129/87)

Only 100 of 219 total aligned reads displayed.

GCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAACAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACCGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAAGTGAGGCTGTGGTGATTAAATTTCTCTCT  >  CP009273/1131456‑1131747
                                                                                                                                                 |                                                                                                                                                  
gCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAAtacagtac                                                                                                                                                <  1:3065042/150‑1 (MQ=255)
      tgacggtgacggTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTa                                                                                                                                          >  1:3749722/1‑150 (MQ=255)
       gacggtgacggtTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTAc                                                                                                                                         >  2:1025029/1‑150 (MQ=255)
       gacggtgacggtTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTAc                                                                                                                                         >  2:1025212/1‑150 (MQ=255)
        acggtgacggtTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACt                                                                                                                                        <  2:1258502/150‑1 (MQ=255)
        acggtgacggtTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACt                                                                                                                                        <  1:2536733/150‑1 (MQ=255)
          ggtgacggtTGACCAGGTACTGGTCAACGGCATCCTGCATGTGGTGGGTGAAAAAAATATTGCCATTAATCAGGGTACCGAATTTATTCGATTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCa                                                                                                                                      <  1:2129742/150‑1 (MQ=255)
          ggtgacggtTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCa                                                                                                                                      >  2:1181131/1‑150 (MQ=255)
          ggtgacggtTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCa                                                                                                                                      >  1:1157103/1‑150 (MQ=255)
          ggtgacggtTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCa                                                                                                                                      <  1:1776535/150‑1 (MQ=255)
             gacggtTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGt                                                                                                                                   <  1:1900348/150‑1 (MQ=255)
                  ttGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCgg                                                                                                                              >  1:1323621/1‑150 (MQ=255)
                    gACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGAt                                                                                                                            <  2:2098994/150‑1 (MQ=255)
                    gACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGAt                                                                                                                            <  1:3691953/150‑1 (MQ=255)
                     aCCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATg                                                                                                                           <  2:3419032/150‑1 (MQ=255)
                      ccAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATgc                                                                                                                          <  2:2742804/150‑1 (MQ=255)
                        aGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATgcgc                                                                                                                        >  2:895385/1‑150 (MQ=255)
                         ggTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATgcgcg                                                                                                                       <  2:1630465/150‑1 (MQ=255)
                             cTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCAtt                                                                                                                   >  2:3798447/1‑150 (MQ=255)
                               ggTCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGa                                                                                                                 >  1:2422595/1‑150 (MQ=255)
                                 tCAACGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAAt                                                                                                               <  2:1586139/150‑1 (MQ=255)
                                  catcGGCAACCTGCTTGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATa                                                                                                              <  2:3513101/147‑1 (MQ=255)
                                    aCGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACg                                                                                                            <  1:3790356/150‑1 (MQ=255)
                                    aCGGCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACg                                                                                                            >  2:1295520/1‑150 (MQ=255)
                                      ggCAACCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTa                                                                                                          >  2:3408175/1‑150 (MQ=255)
                                          aCCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCa                                                                                                      >  1:1920433/1‑150 (MQ=255)
                                          aCCTGCATGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCa                                                                                                      <  1:612158/150‑1 (MQ=255)
                                             tGCTTGTGGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATg                                                                                                   <  2:3589509/150‑1 (MQ=255)
                                                 tgtgGTGGGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTa                                                                                               <  2:2178048/150‑1 (MQ=255)
                                                   tggtggGTGAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACa                                                                                             <  1:3624357/150‑1 (MQ=255)
                                                        ggtgAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAAc                                                                                        <  2:2698534/150‑1 (MQ=255)
                                                         gtgAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACg                                                                                       <  2:2539175/150‑1 (MQ=255)
                                                          tgAAAAAAAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAActa                                                                                      >  1:1451504/1‑148 (MQ=255)
                                                               aaaaGATTGCCATTAATCATGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTTTATACGTAGGCAATGGCTACATTAACGTAgagc                                                                                 <  2:939482/147‑1 (MQ=255)
                                                               aaaaGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAgcgc                                                                                 >  1:2385570/4‑150 (MQ=255)
                                                               aaaaGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAgcgc                                                                                 >  1:3251093/4‑150 (MQ=255)
                                                                aaaGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCa                                                                                >  2:3459721/3‑150 (MQ=255)
                                                                 aaGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCaa                                                                               >  2:2609428/2‑150 (MQ=255)
                                                                 aaGATTGCCATTAATCAGGGTACCGAATTTATTCGCGTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCaa                                                                               <  2:3146905/149‑1 (MQ=255)
                                                                   gATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCaaaa                                                                             <  1:3154249/150‑1 (MQ=255)
                                                                    aTTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAat                                                                            >  1:66352/1‑150 (MQ=255)
                                                                    aTTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAat                                                                            <  2:2092623/150‑1 (MQ=255)
                                                                       gCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATg                                                                         <  2:814287/150‑1 (MQ=255)
                                                                        ccATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGACGCGCAAAATATgg                                                                        >  1:2960247/1‑150 (MQ=255)
                                                                        ccATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATgg                                                                        >  1:503469/1‑150 (MQ=255)
                                                                          aTTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGc                                                                      >  2:3073668/1‑150 (MQ=255)
                                                                          aTTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGc                                                                      >  1:2215526/1‑150 (MQ=255)
                                                                          aTTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGc                                                                      >  2:2052758/1‑150 (MQ=255)
                                                                           ttAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCt                                                                     <  2:140563/150‑1 (MQ=255)
                                                                            tAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTg                                                                    >  1:708110/1‑150 (MQ=255)
                                                                            tAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTg                                                                    >  2:1852512/1‑150 (MQ=255)
                                                                             aaTCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTgg                                                                   <  2:34525/150‑1 (MQ=255)
                                                                              aTCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGt                                                                  >  2:1972262/1‑150 (MQ=255)
                                                                               tCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGtt                                                                 >  2:3031468/1‑150 (MQ=255)
                                                                               tCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGtt                                                                 >  1:1626293/1‑150 (MQ=255)
                                                                                   ggTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAg                                                             >  1:1871297/1‑150 (MQ=255)
                                                                                    gTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGc                                                            >  2:2769679/1‑150 (MQ=255)
                                                                                    gTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGc                                                            >  2:2571667/1‑150 (MQ=255)
                                                                                          aaTTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTttct                                                      <  1:1025029/150‑1 (MQ=255)
                                                                                          aaTTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTttct                                                      <  1:1025212/150‑1 (MQ=255)
                                                                                            tttATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTttcttc                                                    <  1:871756/150‑1 (MQ=255)
                                                                                                  cGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAAc                                              <  2:3251093/150‑1 (MQ=255)
                                                                                                  cGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAAc                                              >  1:462734/1‑150 (MQ=255)
                                                                                                    cTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCt                                            >  2:621243/1‑150 (MQ=255)
                                                                                                     ttCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTg                                           >  2:1183254/1‑150 (MQ=255)
                                                                                                      tctcTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGt                                          >  1:732165/1‑150 (MQ=255)
                                                                                                        tctGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCg                                        >  2:581667/1‑150 (MQ=255)
                                                                                                         ctGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGc                                       >  1:2584633/1‑150 (MQ=255)
                                                                                                             cGTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAAt                                   <  1:3798447/150‑1 (MQ=255)
                                                                                                              gTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATg                                  >  1:1308873/1‑150 (MQ=255)
                                                                                                              gTGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATg                                  >  1:3377864/1‑150 (MQ=255)
                                                                                                               tGGTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGt                                 <  2:3296515/150‑1 (MQ=255)
                                                                                                                 gTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTaa                               >  1:2173175/1‑150 (MQ=255)
                                                                                                                 gTTAATCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTaa                               >  2:2948899/1‑150 (MQ=255)
                                                                                                                    aaTCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAAGTg                            >  1:1560554/1‑150 (MQ=255)
                                                                                                                     aTCCACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAAGTGa                           >  1:3632396/1‑150 (MQ=255)
                                                                                                                        cACGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAAGTGAGGc                        >  1:3204645/1‑150 (MQ=255)
                                                                                                                         aCGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCAGGTTTCAGCGTTTATTACTTAACCTGTCGCCAAAGTAATTGAGGCt                       >  1:915811/1‑150 (MQ=255)
                                                                                                                          cGCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAAGTGAGGCtg                      <  1:3781316/150‑1 (MQ=255)
                                                                                                                           gCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAAGTGAGGCtgt                     >  2:180924/1‑150 (MQ=255)
                                                                                                                           gCACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAAGTGAGGCtgt                     >  1:3663249/1‑150 (MQ=255)
                                                                                                                            cACTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAAGTGAGGCtgtg                    >  2:2535292/1‑150 (MQ=255)
                                                                                                                             aCTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAAGTGAGGCTgtgg                   >  2:1708879/1‑150 (MQ=255)
                                                                                                                             aCTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAAGTGAGGCTgtgg                   >  1:358805/1‑150 (MQ=255)
                                                                                                                              cTATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAAGTGAGGCTgtggt                  >  1:2751808/1‑150 (MQ=255)
                                                                                                                               tATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAAGTGAGGCTgtggtg                 <  1:643480/150‑1 (MQ=255)
                                                                                                                               tATCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAAGTGAGGCTgtggtg                 >  2:3579156/1‑150 (MQ=255)
                                                                                                                                aTCAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAAGTGAGGCTGTGGTGa                >  2:3500114/1‑150 (MQ=255)
                                                                                                                                  cAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAAGTGAGGCTGTGGTGAtt              >  1:203612/1‑150 (MQ=255)
                                                                                                                                  cAGCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAAGTGAGGCTGTGGTGAtt              >  1:2614669/1‑150 (MQ=255)
                                                                                                                                    gCGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAAGTGAGGCTGTGGTGATTaa            <  1:2814892/150‑1 (MQ=255)
                                                                                                                                     cGGCAGCAATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAAGTGAGGCTGTGGTGATTaaa           <  2:708110/150‑1 (MQ=255)
                                                                                                                                       gcagcaATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAAGTGAGGCTGTGGTGATTAAAtt         <  2:1481700/150‑1 (MQ=255)
                                                                                                                                         agcaATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAAGTGAGGCTGTGGTGATTAAATTtc       >  2:874899/1‑150 (MQ=255)
                                                                                                                                         agcaATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAAGTGAGGCTGTGGTGATTAAATTtc       >  1:1940934/1‑150 (MQ=255)
                                                                                                                                         agcaATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAAGTGAGGCTGTGGTGATTAAATTtc       >  1:1713433/1‑150 (MQ=255)
                                                                                                                                          gcaATACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAAGTGAGGCTGTGGTGATTAAATTtca      <  2:2240174/150‑2 (MQ=255)
                                                                                                                                            aaTACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAAGTGAGGCTGTGGTGATTAAATTtctct    >  2:1711577/1‑150 (MQ=255)
                                                                                                                                             aTACAGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAAGTGAGGCTGTGGTGATTAAATTtctctc   >  1:1072803/1‑150 (MQ=255)
                                                                                                                                              tacagtaccgTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAAGTGAGGCTGTGGTGATTAAATTTctctct  >  2:2909696/1‑150 (MQ=255)
                                                                                                                                                 |                                                                                                                                                  
GCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAACAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACCGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAAGTGAGGCTGTGGTGATTAAATTTCTCTCT  >  CP009273/1131456‑1131747

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑