Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009273 1,211,169 C→A intergenic (‑238/‑76) bluF ← / → ycgZ anti‑repressor for YcgE, blue light‑responsive; FAD‑binding; has c‑di‑GMP phosphodiesterase‑like EAL domain, but does not degrade c‑di‑GMP/RcsB connector protein for regulation of biofilm and acid‑resistance

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092731,211,1690CA100.0% 626.7 / NA 186intergenic (‑238/‑76)bluF/ycgZanti‑repressor for YcgE, blue light‑responsive; FAD‑binding; has c‑di‑GMP phosphodiesterase‑like EAL domain, but does not degrade c‑di‑GMP/RcsB connector protein for regulation of biofilm and acid‑resistance
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (90/96);  total (90/96)

Only 100 of 186 total aligned reads displayed.

TCTTTACATTGATAAAAAATGGAAAAAGTTGAACACTAGTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTCTGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGAGCAATCACTCGTTACTTTGCAAAAGCTAACTTGCA  >  CP009273/1211022‑1211315
                                                                                                                                                   |                                                                                                                                                  
tCTTTACATTGATAAAAAATGGAAAAAGTTGAACACTAGTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATg                                                                                                                                                  <  2:1982632/150‑1 (MQ=255)
tCTTTACATTGATAAAAAATGGAAAAAGTTGAACACTAGTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATg                                                                                                                                                  >  1:3046255/1‑150 (MQ=255)
 cTTTACATTGATAAAAAATGGAAAAAGTTGAACACTAGTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGt                                                                                                                                                 <  2:479205/150‑1 (MQ=255)
 cTTTACATTGATAAAAAATGGAAAAAGTTGAACACTAGTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGt                                                                                                                                                 >  1:3193554/1‑150 (MQ=255)
 atttAAATTTATAAAAAATGTAAAAAGTTTAACTCTAGTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATTCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGt                                                                                                                                                 <  2:2383735/149‑1 (MQ=255)
  tttACATTGATAAAAAATGGAAAAAGTTGAACACTAGTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTa                                                                                                                                                >  1:823024/1‑150 (MQ=255)
   ttACATTGATAAAAAATGGAAAAAGTTGAACACTAGTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTac                                                                                                                                               >  2:2655304/1‑150 (MQ=255)
    tACATTGATAAAAAATGGAAAAAGTTGAACACTAGTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTaca                                                                                                                                              >  1:3774111/1‑150 (MQ=255)
        ttGATAAAAAATGGAAAAAGTTGAACACTAGTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACata                                                                                                                                          <  2:1202280/150‑1 (MQ=255)
         tGATAAAAAATGGAAAAAGTTGAACACTAGTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACatat                                                                                                                                         >  2:1052863/1‑150 (MQ=255)
          gATAAAAAATGGAAAAAGTTGAACACTAGTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATAtt                                                                                                                                        >  2:1485088/1‑150 (MQ=255)
          gATAAAAAATGGAAAAAGTTGAACACTAGTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATAtt                                                                                                                                        >  2:636656/1‑150 (MQ=255)
            tAAAAAATGGAAAAAGTTGAACACTAGTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTc                                                                                                                                      <  2:1022790/150‑1 (MQ=255)
            tAAAAAATGGAAAAAGTTGAACACTAGTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTc                                                                                                                                      <  2:103403/150‑1 (MQ=255)
                aaaTGGAAAAAGTTGAACACTAGTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTAc                                                                                                                                  >  1:1753856/1‑150 (MQ=255)
                 aaTGGAAAAAGTTGAACACTAGTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACa                                                                                                                                 >  2:3802718/1‑150 (MQ=255)
                 aaTGGAAAAAGTTGAACACTAGTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACa                                                                                                                                 >  2:1590732/1‑150 (MQ=255)
                      aaaaaGTTGAACACTAGTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGttt                                                                                                                            <  2:2770513/150‑1 (MQ=255)
                          aGTTGAACACTAGTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTa                                                                                                                        >  2:1577267/1‑150 (MQ=255)
                          aGTTGAACACTAGTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTa                                                                                                                        >  1:2656050/1‑150 (MQ=255)
                            ttGAACACTAGTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTAtt                                                                                                                      <  2:2034146/150‑1 (MQ=255)
                              gAACACTAGTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGt                                                                                                                    >  2:1881508/1‑150 (MQ=255)
                                 cacTAGTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTAc                                                                                                                 >  2:2581726/1‑150 (MQ=255)
                                  acTAGTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACt                                                                                                                <  2:1199944/150‑1 (MQ=255)
                                  acTAGTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACt                                                                                                                <  2:1198947/150‑1 (MQ=255)
                                    tAGTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTc                                                                                                              >  2:730332/1‑150 (MQ=255)
                                      gTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCAc                                                                                                            <  1:2028128/150‑1 (MQ=255)
                                           cGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAAc                                                                                                       >  1:1185524/1‑150 (MQ=255)
                                              aaaaTCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACAtt                                                                                                    >  1:877998/1‑150 (MQ=255)
                                               aaaTCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTg                                                                                                   >  1:83377/1‑150 (MQ=255)
                                                aaTCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGa                                                                                                  <  1:1883950/150‑1 (MQ=255)
                                                  tCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGAtt                                                                                                <  1:1639599/150‑1 (MQ=255)
                                                   cTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTCTTGTTACTTCACTTAACATTGATTa                                                                                               >  2:3063612/1‑150 (MQ=255)
                                                   cTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTa                                                                                               <  1:1747797/150‑1 (MQ=255)
                                                         taGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACAttt                                                                                         >  2:222111/1‑150 (MQ=255)
                                                           gATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACAttttt                                                                                       <  2:3695262/150‑1 (MQ=255)
                                                              tGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAAc                                                                                    <  1:78112/150‑1 (MQ=255)
                                                               gTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACa                                                                                   >  2:2440166/1‑150 (MQ=255)
                                                               gTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACa                                                                                   >  2:3027187/1‑150 (MQ=255)
                                                                  aGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACagag                                                                                >  2:2346061/1‑150 (MQ=255)
                                                                  aGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACagag                                                                                <  1:3162547/150‑1 (MQ=255)
                                                                   gTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAgg                                                                               <  1:3560625/150‑1 (MQ=255)
                                                                    ttAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGc                                                                              <  1:2250701/150‑1 (MQ=255)
                                                                    ttAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGc                                                                              >  2:3452316/1‑150 (MQ=255)
                                                                     tAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCg                                                                             <  2:272687/150‑1 (MQ=255)
                                                                      aaaTGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGt                                                                            >  1:1539753/1‑150 (MQ=255)
                                                                        atgatgCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAg                                                                          <  1:21411/150‑1 (MQ=255)
                                                                        atgatgCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAg                                                                          <  1:2414312/150‑1 (MQ=255)
                                                                          gatgCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAgca                                                                        <  2:1542399/150‑1 (MQ=255)
                                                                           atgCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAgcat                                                                       <  1:3658049/150‑1 (MQ=255)
                                                                            tgCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAgcatg                                                                      <  2:1436310/150‑1 (MQ=255)
                                                                            tgCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAgcatg                                                                      <  2:907303/150‑1 (MQ=255)
                                                                            tgCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAgcatg                                                                      <  1:2768336/150‑1 (MQ=255)
                                                                                atatGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATc                                                                  >  2:1311175/1‑150 (MQ=255)
                                                                                atatGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATc                                                                  >  1:3287567/1‑150 (MQ=255)
                                                                                   tGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCaaa                                                               >  1:2574491/1‑150 (MQ=255)
                                                                                   tGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCaaa                                                               >  1:3377292/1‑150 (MQ=255)
                                                                                     ttttATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCAGTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAAt                                                             <  1:1822667/150‑1 (MQ=255)
                                                                                          tCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGt                                                        <  1:1922272/150‑1 (MQ=255)
                                                                                           cATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTg                                                       >  1:3007893/1‑150 (MQ=255)
                                                                                            aTAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGa                                                      >  1:950824/1‑150 (MQ=255)
                                                                                             tAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGAc                                                     >  1:1548323/1‑150 (MQ=255)
                                                                                              aaCACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACt                                                    <  2:3183432/150‑1 (MQ=255)
                                                                                              aaCACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACt                                                    <  2:3183188/150‑1 (MQ=255)
                                                                                                cacaTTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACttt                                                  >  2:2290956/1‑150 (MQ=255)
                                                                                                 acaTTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTa                                                 >  1:204503/1‑150 (MQ=255)
                                                                                                 acaTTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTa                                                 >  2:225176/1‑150 (MQ=255)
                                                                                                  caTTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAg                                                <  1:2237581/150‑1 (MQ=255)
                                                                                                    ttGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGAt                                              >  1:367752/1‑150 (MQ=255)
                                                                                                      gTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTc                                            <  2:1777504/150‑1 (MQ=255)
                                                                                                        tttATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTg                                          >  1:2934918/1‑150 (MQ=255)
                                                                                                          tataTGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCg                                        <  1:1321722/150‑1 (MQ=255)
                                                                                                           atatGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCgg                                       >  1:2099013/1‑150 (MQ=255)
                                                                                                             atGCATTAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGa                                     >  2:402122/1‑150 (MQ=255)
                                                                                                                  ttAGCACTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGAGCAAt                                <  1:636656/150‑1 (MQ=255)
                                                                                                                       aCTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGAGCAATCACTc                           <  2:2113873/150‑1 (MQ=255)
                                                                                                                        cTAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGAGCAATCACTCg                          >  1:653715/1‑150 (MQ=255)
                                                                                                                         tAATTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGAGCAATCACTCGt                         >  1:1234973/1‑150 (MQ=255)
                                                                                                                          aaTTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGAGCAATCACTCGtt                        >  1:1009571/1‑150 (MQ=255)
                                                                                                                          aaTTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGAGCAATCACTCGtt                        <  1:2752682/150‑1 (MQ=255)
                                                                                                                           aTTGCAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGAGCAATCACTCGTTa                       <  1:461868/150‑1 (MQ=255)
                                                                                                                               cAAAAAATTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGAGCAATAACTCGTTACttt                   >  2:3567397/1‑150 (MQ=255)
                                                                                                                                 aaaaaTTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGAGCAATCACTCGTTACTTTGc                 <  1:1055220/150‑1 (MQ=255)
                                                                                                                                  aaaaTTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGAGCAATCACTCGTTACTTTGCa                <  1:147579/150‑1 (MQ=255)
                                                                                                                                   aaaTTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGAGCAATCACTCGTTACTTTGCaa               >  1:1656749/1‑150 (MQ=255)
                                                                                                                                   aaaTTAATTTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACCTTAGATTCTGCGGGAGCAATCACTCGTTACTTTGCaa               >  2:1810590/1‑150 (MQ=255)
                                                                                                                                     attaattTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGAGCAATCACTCGTTACTTTGCaaaa             <  1:543332/150‑1 (MQ=255)
                                                                                                                                     attaattTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGAGCAATCACTCGTTACTTTGCaaaa             >  1:493319/1‑150 (MQ=255)
                                                                                                                                     attaattTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGAGCAATCACTCGTTACTTTGCaaaa             >  2:2238680/1‑150 (MQ=255)
                                                                                                                                     attaaatTATCAATATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCCTAGCATGCATCAAAAATCAGTGACTATAGATTATGCGGGAGCAAACACTCGTTACTTTGCaaaa             >  2:2105377/1‑150 (MQ=255)
                                                                                                                                      ttaattTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGAGCAATCACTCGTTACTTTGCAAAAg            >  1:604526/1‑150 (MQ=255)
                                                                                                                                      ttaattTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGAGCAATCACTCGTTACTTTGCAAAAg            <  2:611890/150‑1 (MQ=255)
                                                                                                                                        aattTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGTGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGAGCAATCACTCGTTACTTTGCAAAAGCt          <  1:3127147/150‑1 (MQ=255)
                                                                                                                                         attTATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGAGCAATCACTCGTTACTTTGCAAAAGCTa         >  1:593297/1‑150 (MQ=255)
                                                                                                                                          tttATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGAGCAATCACTCGTTACTTTGCAAAAGCTaa        >  1:3559451/1‑150 (MQ=255)
                                                                                                                                           ttATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGAGCAATCACTCGTTACTTTGCAAAAGCTAAc       <  2:523029/150‑1 (MQ=255)
                                                                                                                                            tATCATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGAGCAATCACTCGTTACTTTGCAAAAGCTAACt      <  2:321054/150‑1 (MQ=255)
                                                                                                                                               cATTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGAGCAATCACTCGTTACTTTGCAAAAGCTAACTTGc   <  1:1014525/150‑1 (MQ=255)
                                                                                                                                                aTTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGAGCAATCACTCGTTACTTTGCAAAAGCTAACTTGCa  >  1:3336768/1‑150 (MQ=255)
                                                                                                                                                aTTATGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGAGCAATCACTCGTTACTTTGCAAAAGCTAACTTGCa  <  1:2483339/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
TCTTTACATTGATAAAAAATGGAAAAAGTTGAACACTAGTTGGCGAAAAATCTTGTATAGATTGTCAGTTAAATGATGCAATATGTTTTATCATAACACATTGTTTTATATGCATTAGCACTAATTGCAAAAAATTAATTTATCATTCTGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTTTTAACAGAGGCGTAGCATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGAGCAATCACTCGTTACTTTGCAAAAGCTAACTTGCA  >  CP009273/1211022‑1211315

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: