BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009273	1,241,397	T→A	H479L (CAC→CTC)	treA ←	periplasmic trehalase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	1,241,397	0	T	A	100.0%	767.4 / NA	231	H479L (CAC→CTC)	treA	periplasmic trehalase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (121/110); total (121/110)

Only 100 of 231 total aligned reads displayed.

ATTTTCAGCGTCACGCCATTGGTCCAGCCAAAGCCATCCTGTAATGGATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGTGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCATTGTTGCCCACTTTTCACCGACGTGGTGTTCAGGCCGCCGGGTTGCAG  >  CP009273/1241250‑1241542

aTTTTCAGCGTCACGCCATTGGTCCAGCCAAAGCCATCCTGTAATGGATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGc                                                                                                                                                 >  1:3391609/1‑150 (MQ=255)

aTTTTCAGCGTCACGCCATTGGTCCAGCCAAAGCCATCCTGTAATGGATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGc                                                                                                                                                 <  2:3684991/150‑1 (MQ=255)

      aNCGTCACGCCATTGGTCCAGCCAAAGCCATCCTGTAATGGATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTa                                                                                                                                           >  1:2227244/1‑150 (MQ=255)

      aGCGTCACGCCATTGGTCCAGCCAAAGCCATCCTGTAATGGATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTa                                                                                                                                           <  1:1102432/150‑1 (MQ=255)

         gTCACGCCATTGGTCCAGCCAAAGCCATCCTGTAATGGATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATg                                                                                                                                        >  1:3732542/1‑150 (MQ=255)

             cGCCATTGGTCCAGCCAAAGCCATCCTGTAATGGATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCa                                                                                                                                    <  2:3644397/150‑1 (MQ=255)

              gCCATTGGTCCAGCCAAAGCCATCCTGTAATGGATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCAt                                                                                                                                   >  1:1350581/1‑150 (MQ=255)

                  ttGGTCCAGCCAAAGCCATCCTGTAATGGATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGcc                                                                                                                               >  1:1302264/1‑150 (MQ=255)

                  ttGGTCCAGCCAAAGCCATCCTGTAATGGATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGcc                                                                                                                               <  2:1238106/150‑1 (MQ=255)

                       ccAGCCAAAGCCATCCTGTAATGGATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACctc                                                                                                                          >  2:41246/1‑150 (MQ=255)

                        cAGCCAAAGCCATCCTGTAATGGATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACctct                                                                                                                         <  1:1152636/150‑1 (MQ=255)

                        cAGCCAAAGCCATCCTGTAATGGATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACctct                                                                                                                         >  2:1374283/1‑150 (MQ=255)

                          gCCAAAGCCATCCTGTAATGGATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCttt                                                                                                                       <  1:1324356/150‑1 (MQ=255)

                          gCCAAAGCCATCCTGTAATGGATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCttt                                                                                                                       <  1:3550765/150‑1 (MQ=255)

                                  taTCCTGTAATGGATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGt                                                                                                               >  1:1627217/2‑150 (MQ=255)

                                  cATCCTGTAATGGATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGt                                                                                                               >  1:1130693/1‑150 (MQ=255)

                                   aTCCTGTAATGGATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTa                                                                                                              <  2:635569/150‑1 (MQ=255)

                                    tCCTGTAATGGATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAg                                                                                                             <  2:1748170/150‑1 (MQ=255)

                                     ccTGTAATGGATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGt                                                                                                            <  2:2415846/150‑1 (MQ=255)

                                       tGTAATGGATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGttt                                                                                                          <  1:2143143/150‑1 (MQ=255)

                                        gTAATGGATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGtttt                                                                                                         <  1:787325/150‑1 (MQ=255)

                                        gTAATGGATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCATTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGtttt                                                                                                         <  2:2111232/150‑1 (MQ=255)

                                         tAATGGATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTg                                                                                                        <  1:3305524/150‑1 (MQ=255)

                                            tGGATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTaa                                                                                                     >  2:3726669/1‑150 (MQ=255)

                                            tGGATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTGTTGCCCGTAGTTTTGTaa                                                                                                     >  2:3121428/1‑150 (MQ=255)

                                             ggATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAAt                                                                                                    <  2:492455/150‑1 (MQ=255)

                                             ggATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAAt                                                                                                    >  2:1459798/1‑150 (MQ=255)

                                               atatTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATcc                                                                                                  <  1:3199070/150‑1 (MQ=255)

                                                tatTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCt                                                                                                 >  2:2799329/1‑150 (MQ=255)

                                                 atTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCtt                                                                                                >  2:339138/1‑150 (MQ=255)

                                                 atTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCtt                                                                                                <  2:3187709/150‑1 (MQ=255)

                                                  ttCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTc                                                                                               <  2:2308515/150‑1 (MQ=255)

                                                    cGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTg                                                                                             >  2:2898879/1‑150 (MQ=255)

                                                     gCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGt                                                                                            >  1:1658658/1‑150 (MQ=255)

                                                       cACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTcg                                                                                          >  2:911789/1‑150 (MQ=255)

                                                       cACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTcg                                                                                          >  1:3686804/1‑150 (MQ=255)

                                                        aCCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTcgc                                                                                         <  2:274332/150‑1 (MQ=255)

                                                         ccgccgCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTcgcg                                                                                        >  1:1050692/1‑150 (MQ=255)

                                                          cgccgcCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGa                                                                                       >  1:2487522/1‑150 (MQ=255)

                                                           gccgccCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCTAc                                                                                      >  1:309484/1‑150 (MQ=255)

                                                             cgccCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGAccc                                                                                    >  2:2577319/1‑150 (MQ=255)

                                                             cgccCCCCGTTCCGGTGGTGCTGACATCATATTTTACCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGAccc                                                                                    >  2:2393536/1‑150 (MQ=255)

                                                              gccCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCa                                                                                   >  1:2962179/1‑150 (MQ=255)

                                                              gccCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCa                                                                                   >  1:487947/1‑150 (MQ=255)

                                                               ccccccGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCAc                                                                                  >  1:1836698/1‑150 (MQ=255)

                                                                cccccGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACt                                                                                 <  1:3786978/150‑1 (MQ=255)

                                                                 ccccGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTg                                                                                <  1:2607356/150‑1 (MQ=255)

                                                                   ccGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTa                                                                              <  1:2383893/150‑1 (MQ=255)

                                                                     gTTCCGTTTGTTCTTAAATAATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAAc                                                                            <  2:1779176/150‑1 (MQ=255)

                                                                     gTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAAc                                                                            <  1:953183/150‑1 (MQ=255)

                                                                     gTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAAc                                                                            >  2:1278032/1‑150 (MQ=255)

                                                                          ggtggtGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGc                                                                       <  2:3057171/150‑1 (MQ=255)

                                                                            tggtgCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGccc                                                                     <  2:3719410/150‑1 (MQ=255)

                                                                            tggtgCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGccc                                                                     >  2:1980155/1‑150 (MQ=255)

                                                                            tggtgCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGccc                                                                     <  1:2261925/150‑1 (MQ=255)

                                                                            tggtgCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGccc                                                                     >  1:3497047/1‑150 (MQ=255)

                                                                              gtgCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCTACCCACTGTAACGGTGCCCAg                                                                   >  1:508438/1‑150 (MQ=255)

                                                                              gtgCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAg                                                                   >  1:3566817/1‑150 (MQ=255)

                                                                                gCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTTCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGcc                                                                 <  1:1867768/150‑1 (MQ=255)

                                                                                      atcatATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTgg                                                           <  2:863290/150‑1 (MQ=255)

                                                                                      atcatATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTgg                                                           <  2:1210486/150‑1 (MQ=255)

                                                                                      atcatATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTgg                                                           <  2:2131790/150‑1 (MQ=255)

                                                                                       tcatATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGgc                                                          >  2:2657442/1‑150 (MQ=255)

                                                                                         atatTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGgcgc                                                        >  1:348139/1‑150 (MQ=255)

                                                                                          tatTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCa                                                       <  2:2249106/150‑1 (MQ=255)

                                                                                              tttCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc                                                   >  1:887218/1‑150 (MQ=255)

                                                                                              tttCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATccc                                                   <  1:2766545/150‑1 (MQ=255)

                                                                                               ttCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCa                                                  <  2:1957317/150‑1 (MQ=255)

                                                                                                tCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCAt                                                 >  2:2039634/1‑150 (MQ=255)

                                                                                                tCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCAt                                                 <  2:149776/150‑1 (MQ=255)

                                                                                                 ccaccaGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCAtt                                                <  2:1728603/150‑1 (MQ=255)

                                                                                                  caccaGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCAttg                                               <  2:2195150/150‑1 (MQ=255)

                                                                                                    ccaGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCAttgtt                                             >  2:2338087/1‑150 (MQ=255)

                                                                                                    ccaGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCAttgtt                                             <  1:1238689/150‑1 (MQ=255)

                                                                                                    ccaGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCAttgtt                                             >  1:1945304/1‑150 (MQ=255)

                                                                                                    ccaGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCAttgtt                                             >  1:2789093/1‑150 (MQ=255)

                                                                                                     caGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCAttgttg                                            >  1:2360589/1‑150 (MQ=255)

                                                                                                      aGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGACGAGCCAGCTAAGGTCCATCGCCACCTCGTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCATTGTTGc                                           >  2:2506613/1‑150 (MQ=255)

                                                                                                         tttttCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCATTGTTGCCCa                                        >  1:690963/1‑150 (MQ=255)

                                                                                                           tttCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCATTGTTGCCCACt                                      >  1:422774/1‑150 (MQ=255)

                                                                                                             tctcCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCATTGTTGCCCACttt                                    <  1:3465994/150‑1 (MQ=255)

                                                                                                             tctcCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCATTGTTGCCCACttt                                    <  2:3519339/150‑1 (MQ=255)

                                                                                                             tctcCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCATTGTTGCCCACttt                                    >  1:2748520/1‑150 (MQ=255)

                                                                                                             tctcCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCATTGTTGCCCACttt                                    <  2:1348999/150‑1 (MQ=255)

                                                                                                                cccGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCATTGTTGCCCACTTTTCa                                 >  2:2339726/1‑150 (MQ=255)

                                                                                                                 ccGGTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCATTGTTGCCCACTTTTCAc                                <  1:2844172/150‑1 (MQ=255)

                                                                                                                   ggTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCATTGTTGCCCACTTTTCACCg                              <  1:3112750/150‑1 (MQ=255)

                                                                                                                   ggTCATAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCATTGTTGCCCACTTTTCACCg                              >  1:1358486/1‑150 (MQ=255)

                                                                                                                       aTAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCATTGTTGCCCACTTTTCACCGACgt                          >  1:2637674/1‑150 (MQ=255)

                                                                                                                        tAGGTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCATTGTTGCCCACTTTTCACCGACgtg                         >  2:3565253/1‑150 (MQ=255)

                                                                                                                          ggTGTGCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCATTGTTGCCCACTTTTCACCGACgtggt                       <  2:1302264/150‑1 (MQ=255)

                                                                                                                             gtgCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCATTGTTGCCCACTTTTCACCGACGTGGTGtt                    <  2:3732542/150‑1 (MQ=255)

                                                                                                                             gtgCTGAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGGAACGGTGCCCAGCCATTTGGCGCATCCCATTGTTGCCCACTTTTCACCGACGTGGTGtt                    <  1:1958227/150‑1 (MQ=255)

                                                                                                                                  gAACATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCATTGTTGCCCACTTTTCACCGACGTGGTGTTCAGgc               <  1:2657442/150‑1 (MQ=255)

                                                                                                                                   aaCATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCATTGTTGCCCACTTTTCACCGACGTGGTGTTCAGgcc              >  1:585086/1‑150 (MQ=255)

                                                                                                                                   aaCATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCATTGTTGCCCACTTTTCACCGACGTGGTGTTCAGgcc              <  1:1459798/150‑1 (MQ=255)

                                                                                                                                     cATTGGTCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCATTGTTGCCCACTTTTCACCGACGTGGTGTTCAGgccgc            >  2:1099975/1‑150 (MQ=255)

                                                                                                                                           tCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCATTGTTGCCCACTTTTCACCGACGTGGTGTTCAGGCCGCCGGGtt      <  1:1491440/150‑1 (MQ=255)

                                                                                                                                           tCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCATTGTTGCCCACTTTTCACCGACGTGGTGTTCAGGCCGCCGGGtt      <  2:879136/150‑1 (MQ=255)

                                                                                                                                           tCAGGAAGAGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCATTGTTGCCCACTTTTCACCGACGTGGTGTTCAGGCCGCCGGGtt      <  1:3649747/150‑1 (MQ=255)

ATTTTCAGCGTCACGCCATTGGTCCAGCCAAAGCCATCCTGTAATGGATATTCGCCACCGCCGCCCCCCGTTCCGGTGGTGCTGACATCATATTTTTCCACCAGCTTTTTCTCCCGGTCATAGGTGTGCTGAACATTGGTCAGGAAGTGCCAGCTAATGTCCATCGCCACCTCTTTTTGCCCGTAGTTTTGTAATCCTTCTGTCGCGACCCACTGTAACGGTGCCCAGCCATTTGGCGCATCCCATTGTTGCCCACTTTTCACCGACGTGGTGTTCAGGCCGCCGGGTTGCAG  >  CP009273/1241250‑1241542

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`