BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009273	1,326,726	A→T	P474P (CCA→CCT)	topA →	DNA topoisomerase I, omega subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	1,326,726	0	A	T	100.0%	619.6 / NA	188	P474P (CCA→CCT)	topA	DNA topoisomerase I, omega subunit
Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (96/92); total (96/92)

Only 100 of 188 total aligned reads displayed.

GGTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCAGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTACGTGCGAGTAGAAAATCGTCGTTTCTATGCGGAAAAAATGGG  >  CP009273/1326580‑1326872

ggTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGcc                                                                                                                                                 >  2:3791951/1‑150 (MQ=255)

   cGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGt                                                                                                                                              <  1:3115520/150‑1 (MQ=255)

     tATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTAACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGttt                                                                                                                                            >  2:1113366/1‑150 (MQ=255)

       ttttGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCa                                                                                                                                          <  2:2887025/150‑1 (MQ=255)

       ttttGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTATTTGAACTTACACCAGACCAGCACTTTACCAAGCCGCCTGCCCGTTTCa                                                                                                                                          <  1:2559232/150‑1 (MQ=255)

        tttGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTACCAGCTGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAg                                                                                                                                         >  1:3469924/1‑150 (MQ=255)

            cGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGaa                                                                                                                                     >  2:2767663/1‑150 (MQ=255)

            cGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGaa                                                                                                                                     <  2:3670074/150‑1 (MQ=255)

              ttttGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGc                                                                                                                                   >  2:1828484/1‑150 (MQ=255)

                 tGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATc                                                                                                                                <  1:1714271/150‑1 (MQ=255)

                    tGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCt                                                                                                                             >  2:3415320/1‑150 (MQ=255)

                    tGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCt                                                                                                                             >  1:2070717/1‑150 (MQ=255)

                    tGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCt                                                                                                                             >  1:2070686/1‑150 (MQ=255)

                     ggCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTg                                                                                                                            >  1:1606786/1‑150 (MQ=255)

                             aaaaGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAaga                                                                                                                    <  1:912797/150‑1 (MQ=255)

                                 gTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTg                                                                                                                <  1:407288/150‑1 (MQ=255)

                                  tGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTgg                                                                                                               >  1:2124418/1‑150 (MQ=255)

                                   gATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGa                                                                                                              >  2:2422819/1‑150 (MQ=255)

                                   gATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGa                                                                                                              >  1:1065320/1‑150 (MQ=255)

                                      gCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGaaaa                                                                                                           <  2:1970687/150‑1 (MQ=255)

                                        cTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAAc                                                                                                         <  1:2360198/150‑1 (MQ=255)

                                          gcgttgcgtAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAAcgc                                                                                                       <  1:3305626/150‑1 (MQ=255)

                                           cgttgcgtAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAAcgcg                                                                                                      <  1:658944/150‑1 (MQ=255)

                                            gttgcgtAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCgg                                                                                                     >  1:838961/1‑150 (MQ=255)

                                              tgcgtAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTa                                                                                                   >  1:3019871/1‑150 (MQ=255)

                                                cgtAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATc                                                                                                 <  2:467326/150‑1 (MQ=255)

                                                cgtAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATc                                                                                                 >  2:605925/1‑150 (MQ=255)

                                                 gtAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCg                                                                                                <  2:137655/150‑1 (MQ=255)

                                                    aaGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGgtc                                                                                             <  1:52248/150‑1 (MQ=255)

                                                    aaGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGgtc                                                                                             >  2:2452237/1‑150 (MQ=255)

                                                     aGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGgtcg                                                                                            >  1:1672364/1‑150 (MQ=255)

                                                         gATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTcgtccg                                                                                        >  2:2608655/1‑150 (MQ=255)

                                                         gATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTcgtccg                                                                                        >  1:3036669/1‑150 (MQ=255)

                                                            gAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCt                                                                                     <  2:1008631/150‑1 (MQ=255)

                                                            gAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCt                                                                                     <  2:225951/150‑1 (MQ=255)

                                                             aaGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTa                                                                                    >  2:2271274/1‑150 (MQ=255)

                                                              aGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTAc                                                                                   >  1:6964/1‑150 (MQ=255)

                                                               gATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTAcc                                                                                  <  1:1213456/150‑1 (MQ=255)

                                                                aTCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCt                                                                                 <  2:3575211/150‑1 (MQ=255)

                                                                  cGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTAt                                                                               <  2:1266493/150‑1 (MQ=255)

                                                                  cGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTAt                                                                               >  1:399568/1‑150 (MQ=255)

                                                                    cATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGc                                                                             <  2:1218889/150‑1 (MQ=255)

                                                                       cTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTc                                                                          >  1:740869/1‑150 (MQ=255)

                                                                         tACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGa                                                                        >  2:504883/1‑150 (MQ=255)

                                                                         tACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGa                                                                        >  2:2515090/1‑150 (MQ=255)

                                                                         tACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGa                                                                        >  2:2948109/1‑150 (MQ=255)

                                                                          aCCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGAt                                                                       >  2:1460191/1‑150 (MQ=255)

                                                                           ccAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATc                                                                      <  2:1414724/150‑1 (MQ=255)

                                                                           ccAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATc                                                                      <  2:3363988/150‑1 (MQ=255)

                                                                           ccAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATc                                                                      <  2:3311706/150‑1 (MQ=255)

                                                                            cagcagTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCa                                                                     <  2:1673165/150‑1 (MQ=255)

                                                                            cagcagTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCa                                                                     >  1:2613043/1‑150 (MQ=255)

                                                                             agcagTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCAt                                                                    <  2:2693086/150‑1 (MQ=255)

                                                                                  ttAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGa                                                               >  1:2969451/1‑150 (MQ=255)

                                                                                    aataaAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGAcc                                                             >  1:630104/1‑150 (MQ=255)

                                                                                    aataaAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGAcc                                                             >  1:3616061/1‑150 (MQ=255)

                                                                                    aataaAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGAcc                                                             >  1:631629/1‑150 (MQ=255)

                                                                                     ataaAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCa                                                            >  2:565607/1‑150 (MQ=255)

                                                                                     ataaAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCa                                                            <  1:2718351/150‑1 (MQ=255)

                                                                                     ataaAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCa                                                            >  1:2378141/1‑150 (MQ=255)

                                                                                       aaaGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCAtt                                                          >  1:2746615/1‑150 (MQ=255)

                                                                                            cGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGa                                                     <  2:3446436/150‑1 (MQ=255)

                                                                                             gATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGAt                                                    <  1:830930/150‑1 (MQ=255)

                                                                                             gATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGAt                                                    <  1:2734467/150‑1 (MQ=255)

                                                                                             gATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGAt                                                    >  1:1803282/1‑150 (MQ=255)

                                                                                              aTGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATc                                                   <  2:3042309/150‑1 (MQ=255)

                                                                                              aTGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATc                                                   <  2:1682016/150‑1 (MQ=255)

                                                                                              aTGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATc                                                   <  2:1623265/150‑1 (MQ=255)

                                                                                              aTGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATc                                                   >  2:3757834/1‑150 (MQ=255)

                                                                                               tGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCg                                                  <  1:3654576/150‑1 (MQ=255)

                                                                                                  tctGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTgg                                               <  1:2422819/150‑1 (MQ=255)

                                                                                                   ctGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGc                                              <  1:1158279/150‑1 (MQ=255)

                                                                                                    tGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCt                                             <  2:2248170/150‑1 (MQ=255)

                                                                                                     gACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTa                                            >  1:2314023/1‑150 (MQ=255)

                                                                                                       cGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTACg                                          >  1:3415635/1‑150 (MQ=255)

                                                                                                         cTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTACGTg                                        <  1:1005269/150‑1 (MQ=255)

                                                                                                           cGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTACGTGCg                                      >  1:989453/1‑150 (MQ=255)

                                                                                                            gTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTACGTGCGa                                     <  1:717377/150‑1 (MQ=255)

                                                                                                            gTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTACGTGCGa                                     <  1:1244695/150‑1 (MQ=255)

                                                                                                            gTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGAAAAAGAGCTGGAAAAACGCGGAATCGGTCGTCCGTCTACCTATGCGTCTATCATATCTACCAAACAGTATCGTGGCTAAGTACGa                                     >  1:1968255/1‑150 (MQ=255)

                                                                                                              tGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTACGTGCGAGt                                   >  1:1396838/1‑150 (MQ=255)

                                                                                                               gAACTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTACGTGCGAGTa                                  <  1:2214032/150‑1 (MQ=255)

                                                                                                                aaCTTACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTACGTGCGAGTAg                                 >  1:1756171/1‑150 (MQ=255)

                                                                                                                   ttACACCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTACGTGCGAGTAGaaa                              >  1:1013040/1‑150 (MQ=255)

                                                                                                                      cacCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTACGTGCGAGTAGAAAAtc                           <  1:1113366/150‑1 (MQ=255)

                                                                                                                      cacCAGCCCAGCACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTACGTGCGAGTAGAAAAtc                           <  2:838940/150‑1 (MQ=255)

                                                                                                                         cagcccagcACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTACGTGCGAGTAGAAAAtcgtc                        >  1:2188968/1‑150 (MQ=255)

                                                                                                                          agcccagcACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTACGTGCGAGTAGAAAAtcgtcg                       <  1:2449255/150‑1 (MQ=255)

                                                                                                                          agcccagcACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTACGTGCGAGTAGAAAAtcgtcg                       <  1:1471150/150‑1 (MQ=255)

                                                                                                                             ccagcACTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTACGTGCGAGTAGAAAATCGTCGttt                    <  2:12379/150‑1 (MQ=255)

                                                                                                                                   cTTTACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTACGTGCGAGTAGAAAATCGTCGTTTCTATGc              <  1:1142697/150‑1 (MQ=255)

                                                                                                                                     ttACCAAGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTACGTGCGAGTAGAAAATCGTCGTTTCTATGCgg            <  1:779358/150‑1 (MQ=255)

                                                                                                                                           aGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTACGTGCGAGTAGAAAATCGTCGTTTCTATGCGGaaaaaa      <  1:2767663/150‑1 (MQ=255)

                                                                                                                                           aGCCGCCTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTACGTGCGAGTAGAAAAGCGTCGTTGCTATGCGGaaaaaa      >  2:17248/1‑150 (MQ=255)

                                                                                                                                              cgccTGCCCGTTTCAGTGACGCATCGCTGGTTAACGAGCTGGACAATCGCGGTATCGGTCGTCCGTCTACCTCAGCGTCGATCATTCCGCCCCTTCCGGATCGAGGCCACCTGCGAGGAGACAATCGTCGTTTCAATGCGGAAAAAATgg   <  2:3469924/150‑1 (MQ=255)

                                                                                                                                              cgccTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTACGTGCGAGTAGAAAATCGTCGTTTCTATGCGGAAAAAATgg   <  2:3333522/150‑1 (MQ=255)

                                                                                                                                              cgccTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTACGTGCGAGTAGAAAATCGTCGTTTCTATGCGGAAAAAATgg   <  2:63069/150‑1 (MQ=255)

                                                                                                                                               gccTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTACGTGCGAGTAGAAAATCGTCGTTTCTATGCGGAAAAAATggg  <  1:477117/150‑1 (MQ=255)

                                                                                                                                               gccTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTACGTGCGAGTAGAAAATCGTCGTTTCTATGCGGAAAAAATggg  >  1:2514692/1‑150 (MQ=255)

                                                                                                                                               gccTGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTACGTGCGAGTAGAAAATCGTCGTTTCTATGCGGAAAAAATggg  >  2:912654/1‑150 (MQ=255)

GGTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCAGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTACGTGCGAGTAGAAAATCGTCGTTTCTATGCGGAAAAAATGGG  >  CP009273/1326580‑1326872

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`