Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009273 1,421,685 T→A pseudogene (40/210 nt) lomR → pseudogene, Rac prophage lom homolog;Phage or Prophage Related; interrupted by IS5 and N‑ter deletion

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092731,421,6850TA100.0% 891.5 / NA 268pseudogene (40/210 nt)lomRpseudogene, Rac prophage lom homolog;Phage or Prophage Related; interrupted by IS5 and N‑ter deletion
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (123/145);  total (123/145)

Only 100 of 268 total aligned reads displayed.

ACAAACGGCTTTTGCTATGCGCATGTTGCCTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTTACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGAT  >  CP009273/1421538‑1421831
                                                                                                                                                   |                                                                                                                                                  
acaaacGGCTTTTGCTATGCGCATGTTGCCTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAAc                                                                                                                                                  <  2:2092795/150‑1 (MQ=255)
 caaacGGCTTTTGCTATGCGCATTTTGCCTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACa                                                                                                                                                 <  2:1200362/150‑1 (MQ=255)
 caaacGGCTTTTGCTATGCGCATGTTGCCTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACa                                                                                                                                                 <  1:3628379/150‑1 (MQ=255)
  aaacTGCTTTTGCTATGCGCATGTTGCCTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAg                                                                                                                                                <  2:762402/150‑1 (MQ=255)
  aaacGGCTTTTGCTATGCGCATGTTGCCTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAg                                                                                                                                                <  1:1291693/150‑1 (MQ=255)
  aaacGGCTTTTGCTATGCGCATGTTGCCTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAg                                                                                                                                                >  2:1578592/1‑150 (MQ=255)
   aacGGCTTTTGCTATGCGCATGTTGCCTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGc                                                                                                                                               >  2:1827316/1‑150 (MQ=255)
   aacGGCTTTTGCTATGCGCATGTTGCCTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGc                                                                                                                                               >  2:3468792/1‑150 (MQ=255)
   aacGGCTTTTGCTATGCGCATGTTGCCTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGc                                                                                                                                               >  2:3022747/1‑150 (MQ=255)
   aacGGCTTTTGCTATGCGCATGTTGCCTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGc                                                                                                                                               <  1:3085288/150‑1 (MQ=255)
   aacGGCTTTTGCTATGCGCATGTTGCCTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGc                                                                                                                                               <  2:2368251/150‑1 (MQ=255)
     cGGCTTTTGCTATGCGCATGTTGCCTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGa                                                                                                                                             >  1:3155183/1‑150 (MQ=255)
      ggCTTTTGCTATGCGCATGTTGCCTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGAt                                                                                                                                            >  1:2423215/1‑150 (MQ=255)
          tttGCTATGCGCATGTTGCCTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATAccc                                                                                                                                        <  2:3176243/150‑1 (MQ=255)
              cTATGCGCATGTTGCCTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTg                                                                                                                                    <  1:483742/150‑1 (MQ=255)
                 tGCGCATGTTGCCTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCa                                                                                                                                 >  1:3381822/1‑150 (MQ=255)
                  gcgcATGTTGCCTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCAt                                                                                                                                >  1:1641562/1‑150 (MQ=255)
                    gcATGTTGCCTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGa                                                                                                                              >  1:1047179/1‑150 (MQ=255)
                      aTGTTGCCTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAg                                                                                                                            >  1:3469013/1‑150 (MQ=255)
                        gTTGCCTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGAt                                                                                                                          >  1:1389753/1‑150 (MQ=255)
                        gTTGCCTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGAt                                                                                                                          <  1:3260742/150‑1 (MQ=255)
                         ttGCCTGCACAAATGACGTATATTGTTGTTGGGTTGTCCATTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCTGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGAtt                                                                                                                         <  1:2626668/150‑1 (MQ=255)
                         ttGCCTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGAtt                                                                                                                         <  1:759391/150‑1 (MQ=255)
                         ttGCCTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGAtt                                                                                                                         >  1:545649/1‑150 (MQ=255)
                           gCCTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTcc                                                                                                                       <  2:1501554/150‑1 (MQ=255)
                            ccTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCg                                                                                                                      <  2:1456666/150‑1 (MQ=255)
                             cTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCTAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGt                                                                                                                     >  1:2009917/1‑150 (MQ=255)
                                 acaAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGt                                                                                                                 >  1:3180031/1‑150 (MQ=255)
                                    aaTGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAAc                                                                                                              >  1:2354827/1‑150 (MQ=255)
                                     aTGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAAcc                                                                                                             <  2:3155033/150‑1 (MQ=255)
                                      tGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCg                                                                                                            >  2:3103656/1‑150 (MQ=255)
                                      tGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCg                                                                                                            <  2:2291102/150‑1 (MQ=255)
                                      tGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCg                                                                                                            <  2:2842597/150‑1 (MQ=255)
                                       gACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGc                                                                                                           >  2:2660502/1‑150 (MQ=255)
                                        aCGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCt                                                                                                          <  2:2484873/150‑1 (MQ=255)
                                        aCGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCt                                                                                                          <  2:340999/150‑1 (MQ=255)
                                        aCGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCt                                                                                                          <  1:2526180/150‑1 (MQ=255)
                                          ggATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTgg                                                                                                        >  2:2709071/1‑150 (MQ=255)
                                           gATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGt                                                                                                       >  1:1657367/1‑150 (MQ=255)
                                           gATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGt                                                                                                       >  2:2225509/1‑150 (MQ=255)
                                            atatTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGtt                                                                                                      >  2:3371698/1‑150 (MQ=255)
                                              atTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCa                                                                                                    <  2:3648926/150‑1 (MQ=255)
                                                tgttgttgGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGc                                                                                                  >  1:3324600/1‑150 (MQ=255)
                                                 gttgttgGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCg                                                                                                 >  1:2702866/1‑150 (MQ=255)
                                                  ttgttgGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGt                                                                                                <  2:1076916/150‑1 (MQ=255)
                                                         gTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGAtggtg                                                                                         <  1:902520/150‑1 (MQ=255)
                                                            gTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTgggg                                                                                      <  1:1557648/150‑1 (MQ=255)
                                                              ccACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGcc                                                                                    <  2:3741221/150‑1 (MQ=255)
                                                                 cTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTc                                                                                 <  1:2499584/150‑1 (MQ=255)
                                                                   ggTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCtg                                                                               >  2:2945117/1‑150 (MQ=255)
                                                                    gTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCtgt                                                                              <  2:2131510/150‑1 (MQ=255)
                                                                    gTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCtgt                                                                              <  2:3063949/150‑1 (MQ=255)
                                                                       aGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTgcg                                                                           >  1:2066451/1‑150 (MQ=255)
                                                                        gTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTgcgc                                                                          >  1:1071974/1‑150 (MQ=255)
                                                                           gCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGtg                                                                       <  1:1850732/150‑1 (MQ=255)
                                                                                 tATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGtgaatgaa                                                                 <  1:2828326/150‑1 (MQ=255)
                                                                                 tATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGtgaatgaa                                                                 >  1:1732397/1‑150 (MQ=255)
                                                                                   tGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGaatgaatg                                                               <  1:25928/150‑1 (MQ=255)
                                                                                      tgtTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGtt                                                            <  2:2784568/150‑1 (MQ=255)
                                                                                        ttAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCa                                                          <  1:3250978/150‑1 (MQ=255)
                                                                                         tAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAg                                                         <  2:1239022/150‑1 (MQ=255)
                                                                                         tAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAg                                                         <  2:2348682/150‑1 (MQ=255)
                                                                                         tAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAg                                                         <  2:1889918/150‑1 (MQ=255)
                                                                                               agcagGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTa                                                   <  1:3564515/150‑1 (MQ=255)
                                                                                                gcagGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTAt                                                  <  2:1088791/150‑1 (MQ=255)
                                                                                                  agGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGc                                                <  1:1498836/150‑1 (MQ=255)
                                                                                                  agGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGc                                                >  1:244386/1‑150 (MQ=255)
                                                                                                   gggCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCg                                               <  1:1302837/150‑1 (MQ=255)
                                                                                                   gggCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCg                                               >  1:1168257/1‑150 (MQ=255)
                                                                                                     gcggcCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGAt                                             >  1:3686264/1‑150 (MQ=255)
                                                                                                       ggcCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATgg                                           <  1:1422723/150‑1 (MQ=255)
                                                                                                          cATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCgg                                        >  2:2612777/1‑150 (MQ=255)
                                                                                                           aTTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCggg                                       >  2:814728/1‑150 (MQ=255)
                                                                                                           aTTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCggg                                       >  1:839032/1‑150 (MQ=255)
                                                                                                                 cTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGc                                 >  2:3773653/1‑150 (MQ=255)
                                                                                                                 cTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGc                                 <  2:1736458/150‑1 (MQ=255)
                                                                                                                 cTATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGc                                 >  1:2752295/1‑150 (MQ=255)
                                                                                                                  tATGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCt                                <  2:1946650/150‑1 (MQ=255)
                                                                                                                    tGCAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTa                              <  1:2166093/150‑1 (MQ=255)
                                                                                                                      cAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTCTGGCTTACa                            >  2:478274/1‑150 (MQ=255)
                                                                                                                      cAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACa                            >  1:3419977/1‑150 (MQ=255)
                                                                                                                      cAGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACa                            >  2:2383874/1‑150 (MQ=255)
                                                                                                                       aGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAg                           >  1:1983746/1‑150 (MQ=255)
                                                                                                                       aGGAGACAAGAATCGCCAGCTTACCCGTAACAGCGAGACCCGCTGGCAGGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAg                           <  2:3799738/150‑1 (MQ=255)
                                                                                                                        tgagaCAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGc                          >  2:603878/2‑150 (MQ=255)
                                                                                                                         gagaCAAGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGcc                         <  1:70459/150‑1 (MQ=255)
                                                                                                                              aaGAATCGCTAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCgtgtg                    <  2:2009986/150‑1 (MQ=255)
                                                                                                                              aaGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCgtgtg                    <  2:509609/150‑1 (MQ=255)
                                                                                                                               aGAATCGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCgtgtgt                   <  1:763901/150‑1 (MQ=255)
                                                                                                                               aGAATCGCCAGCTTACCCGTAACAGAGATACCCGCTGGCATGTAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCgtgtgt                   <  1:935594/150‑1 (MQ=255)
                                                                                                                                    cGCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTTAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACt              <  2:2765872/150‑1 (MQ=255)
                                                                                                                                     gCCAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGAGTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACtt             <  2:3509804/150‑1 (MQ=255)
                                                                                                                                       cAGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTtc           <  2:1418403/150‑1 (MQ=255)
                                                                                                                                        aGCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTtct          >  2:1047982/1‑150 (MQ=255)
                                                                                                                                         gCTTACCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTtccc         <  2:1189551/150‑3 (MQ=255)
                                                                                                                                             aCCCGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCggg     >  2:1435636/1‑150 (MQ=255)
                                                                                                                                              cccGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCgggg    <  2:3162255/150‑1 (MQ=255)
                                                                                                                                                cGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGAt  >  2:1152603/1‑150 (MQ=255)
                                                                                                                                                cGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGAt  <  1:1847319/150‑1 (MQ=255)
                                                                                                                                                cGTAACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGAt  >  2:1039073/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
ACAAACGGCTTTTGCTATGCGCATGTTGCCTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGCCATTCAGCTATGCAGGAGACAAGAATCGCCAGCTTACCCGTTACAGCGATACCCGCTGGCATGAAGATTCCGTGCGTAACCGCTGGTTCAGCGTGATGGTGGGGCCGTCTGTGCGCGTGAATGAATGGTTCAGCGCGTATGCGATGGCGGGTATGGCTTACAGCCGTGTGTCGACTTTCTCCGGGGAT  >  CP009273/1421538‑1421831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑