Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009273 1,522,007 C→A intergenic (+598/‑152) yncH → / → rhsE IPR020099 family protein/pseudogene, Rhs family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092731,522,0070CA100.0% 908.1 / NA 270intergenic (+598/‑152)yncH/rhsEIPR020099 family protein/pseudogene, Rhs family protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (138/132);  total (138/132)

Only 100 of 270 total aligned reads displayed.

CGGTAGCGTATATTCCTTATACAAACCATCATTCATTTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTCGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCATGACATTTTTCTGATATTCCCCGGTAACGCCAGATGTCGA  >  CP009273/1521860‑1522153
                                                                                                                                                   |                                                                                                                                                  
cGGTAGCGTATATTCCTTATACAAACCATCATTCATTTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGt                                                                                                                                                  >  2:3162436/1‑150 (MQ=255)
 ggTAGCGTATATTCCTTATACAAACCATCATTCATTTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTg                                                                                                                                                 >  2:990807/1‑150 (MQ=255)
    aGCGTATATTCCTTATACAAACCATCATTCATTTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAAt                                                                                                                                              >  1:2031059/1‑150 (MQ=255)
     gCGTATATTCCTTATACAAACCATCATTCATTTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATa                                                                                                                                             >  1:709903/1‑150 (MQ=255)
            ttCCTTATACAAACCATCATTCATTTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCga                                                                                                                                      >  2:1071375/1‑150 (MQ=255)
            ttCCTTATACAAACCATCATTCATTTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCga                                                                                                                                      >  2:3077564/1‑150 (MQ=255)
                ttATACAAACCATCATTCATTTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAAc                                                                                                                                  >  2:1769177/1‑150 (MQ=255)
                ttATACAAACCATCATTCATTTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAAc                                                                                                                                  <  1:3174138/150‑1 (MQ=255)
                 tataCAAACCATCATTCATTTCAATGATTGTTATTGAATTTTTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAAcc                                                                                                                                 <  2:3202486/150‑1 (MQ=255)
                    aCAAACCATCATTCATTTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCAt                                                                                                                              <  1:602034/150‑1 (MQ=255)
                      aaaCCATCATTCATTTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATcc                                                                                                                            <  1:3120398/150‑1 (MQ=255)
                      aaaCCATCATTCATTTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATcc                                                                                                                            <  1:1839870/150‑1 (MQ=255)
                      aaaCCATCATTCATTTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATcc                                                                                                                            >  1:240985/1‑150 (MQ=255)
                       aaCCATCATTCATTTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCg                                                                                                                           <  1:809364/150‑1 (MQ=255)
                        aCCATCATTCATTTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCga                                                                                                                          >  1:262463/1‑149 (MQ=255)
                        aCCATCATTCATTTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGt                                                                                                                          <  2:2528330/150‑1 (MQ=255)
                         ccATCATTCATTTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGtt                                                                                                                         <  1:2193774/150‑1 (MQ=255)
                         ccATCATTCATTTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGtt                                                                                                                         <  1:3496707/150‑1 (MQ=255)
                          catcatTCATTTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTg                                                                                                                        <  2:3650066/150‑1 (MQ=255)
                           atcatTCATTTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGc                                                                                                                       >  2:1995265/1‑150 (MQ=255)
                             cattcattTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGt                                                                                                                     >  1:3296162/1‑150 (MQ=255)
                             cattcattTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGt                                                                                                                     >  1:1441750/1‑150 (MQ=255)
                             cattcattTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGt                                                                                                                     >  1:2988819/1‑150 (MQ=255)
                               ttcattTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGttt                                                                                                                   >  2:1045651/1‑150 (MQ=255)
                               ttcattTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGttt                                                                                                                   <  2:1156825/150‑1 (MQ=255)
                                tcattTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTtg                                                                                                                  <  2:3143585/150‑1 (MQ=255)
                                 cattTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTtgt                                                                                                                 <  2:1892680/150‑1 (MQ=255)
                                 cattTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTtgt                                                                                                                 <  2:3785672/150‑1 (MQ=255)
                                 cattTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTtgt                                                                                                                 >  2:514908/1‑150 (MQ=255)
                                     tCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGatt                                                                                                             >  2:1849739/1‑150 (MQ=255)
                                     tCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGatt                                                                                                             <  1:497490/150‑1 (MQ=255)
                                     tCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGatt                                                                                                             <  2:3540437/150‑1 (MQ=255)
                                     tCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGatt                                                                                                             <  2:1781626/150‑1 (MQ=255)
                                      cAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGatta                                                                                                            <  2:1303813/150‑1 (MQ=255)
                                       aaTGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGattat                                                                                                           >  2:3238335/1‑150 (MQ=255)
                                       aaTGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGattat                                                                                                           <  2:2718508/150‑1 (MQ=255)
                                       aaTGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGattat                                                                                                           >  2:1383802/1‑150 (MQ=255)
                                           cttGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTttg                                                                                                       >  1:2809581/2‑150 (MQ=255)
                                           aTTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTttg                                                                                                       <  1:2262803/150‑1 (MQ=255)
                                            ttGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTttgt                                                                                                      >  2:340101/1‑150 (MQ=255)
                                             tGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTttgtt                                                                                                     <  1:2683633/150‑1 (MQ=255)
                                              gTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTttgttg                                                                                                    >  1:1149599/1‑150 (MQ=255)
                                                 aTTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACt                                                                                                 >  1:1008712/1‑150 (MQ=255)
                                                  ttGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTa                                                                                                <  2:239470/150‑1 (MQ=255)
                                                   tGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTaa                                                                                               >  2:1306446/1‑150 (MQ=255)
                                                   tGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTaa                                                                                               <  2:1594478/150‑1 (MQ=255)
                                                       ttatttatTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAg                                                                                           <  1:939719/150‑1 (MQ=255)
                                                       ttatttatTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAg                                                                                           <  1:990096/150‑1 (MQ=255)
                                                         atttattGTTGTGAATANAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTNCTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGaa                                                                                         <  1:2077308/150‑2 (MQ=255)
                                                         atttattGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGac                                                                                         >  1:3057066/1‑150 (MQ=255)
                                                            tattGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACAcc                                                                                      >  2:2125712/1‑150 (MQ=255)
                                                            tattGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACAcc                                                                                      >  2:1484736/1‑150 (MQ=255)
                                                             attGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACAccc                                                                                     >  2:2221455/1‑150 (MQ=255)
                                                                 ttgtGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGttt                                                                                 <  1:2786713/150‑1 (MQ=255)
                                                                     gAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTctct                                                                             <  2:3679910/150‑1 (MQ=255)
                                                                       aTAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGa                                                                           <  2:205599/150‑1 (MQ=255)
                                                                       aTAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGa                                                                           >  2:3433417/1‑150 (MQ=255)
                                                                        tAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGaa                                                                          >  1:1113091/1‑150 (MQ=255)
                                                                        tAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGaa                                                                          <  1:2114272/150‑1 (MQ=255)
                                                                             aGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTaaa                                                                     <  2:2988819/150‑1 (MQ=255)
                                                                             aGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTaaa                                                                     >  2:808982/1‑150 (MQ=255)
                                                                               aCATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAAt                                                                   >  2:3141569/1‑150 (MQ=255)
                                                                                 aTTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATcc                                                                 >  2:1191949/1‑150 (MQ=255)
                                                                                    aTGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAg                                                              >  1:3448294/1‑150 (MQ=255)
                                                                                       aaTATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACt                                                           <  2:3646535/150‑1 (MQ=255)
                                                                                          atTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTaaa                                                        >  1:3757445/1‑150 (MQ=255)
                                                                                             ggTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAatca                                                     <  2:709903/150‑1 (MQ=255)
                                                                                             ggTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAatca                                                     <  2:2961836/150‑1 (MQ=255)
                                                                                              gTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAatcat                                                    <  1:378127/150‑1 (MQ=255)
                                                                                              gTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAatcat                                                    <  1:1665924/150‑1 (MQ=255)
                                                                                                     tttGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATaa                                             >  2:336429/1‑150 (MQ=255)
                                                                                                     tttGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATaa                                             <  2:2072029/150‑1 (MQ=255)
                                                                                                       tGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAAcc                                           >  2:2419297/1‑150 (MQ=255)
                                                                                                         cATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCAt                                         >  1:1709671/1‑150 (MQ=255)
                                                                                                               aGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCATGACAtt                                   >  2:1650782/1‑150 (MQ=255)
                                                                                                               aGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCATGACAtt                                   >  1:419795/1‑150 (MQ=255)
                                                                                                                 gTTTTTTATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCATGACAtttt                                 >  2:1001551/1‑150 (MQ=255)
                                                                                                                  ttttttATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCATGACAttttt                                <  2:2807382/150‑1 (MQ=255)
                                                                                                                   tttttATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCATGACATTTTTc                               >  1:2339636/1‑150 (MQ=255)
                                                                                                                   tttttATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCATGACATTTTTc                               <  2:1426042/150‑1 (MQ=255)
                                                                                                                    ttttATTACTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCATGACATTTTTCt                              >  1:66152/1‑150 (MQ=255)
                                                                                                                      ttattaCTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCATGACATTTTTCTGa                            <  1:3501225/150‑1 (MQ=255)
                                                                                                                          taCTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCATGACATTTTTCTGATAtt                        <  2:1457813/150‑1 (MQ=255)
                                                                                                                           aCTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCATGACATTTTTCTGATATTc                       <  2:2401958/150‑1 (MQ=255)
                                                                                                                            cTCGCTGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCATGACATTTTTCTGATATTcc                      <  1:3384216/150‑1 (MQ=255)
                                                                                                                                 tGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCATGACATTTTTCTGATATTCCCCGGt                 >  2:585746/1‑150 (MQ=255)
                                                                                                                                 tGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCATGACATTTTTCTGATATTCCCCGGt                 >  1:1747263/1‑150 (MQ=255)
                                                                                                                                 tGTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCATGACATTTTTCTGATATTCCCCGGt                 >  1:1864988/1‑150 (MQ=255)
                                                                                                                                  gTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCATGACATTTTTCTGATATTCCCCGGTa                >  1:1547007/1‑150 (MQ=255)
                                                                                                                                  gTAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCATGACATTTTTCTGATATTCCCCGGTa                <  1:1383455/150‑1 (MQ=255)
                                                                                                                                   tAATGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCATGACATTTTTCTGATATTCCCCGGTaa               <  2:2992360/150‑1 (MQ=255)
                                                                                                                                    aaTGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCATGACATTTTTCTGATATTCCCCGGTAAc              >  2:1950320/1‑150 (MQ=255)
                                                                                                                                     aTGTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCATGACATTTTTCTGATATTCCCCGGTAACg             <  2:945738/150‑1 (MQ=255)
                                                                                                                                       gTACGAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCATGACATTTTTCTGATATTCCCCGGTAACGcc           >  1:1298664/1‑150 (MQ=255)
                                                                                                                                           gAGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCATGACATTTTTCTGATATTCCCCGGTAACGCCAGAt       >  2:3284809/1‑150 (MQ=255)
                                                                                                                                            aGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCATGACATTTTTCTGATATTCCCCGGTAACGCCAGATg      >  1:1984130/1‑150 (MQ=255)
                                                                                                                                            aGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCATGACATTTTTCTGATATTCCCCGGTAACGCCAGATg      <  1:340101/150‑1 (MQ=255)
                                                                                                                                            aGCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCATGACATTTTTCTGATATTCCCCGGTAACGCCAGATg      >  2:12622/1‑150 (MQ=255)
                                                                                                                                             gCCTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCATGACATTTTTCTGATATTCCCCGGTAACGCCAGATGt     >  1:2433835/1‑150 (MQ=255)
                                                                                                                                               cTGTAGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCATGACATTTTTCTGATATTCCCCGGTAACGCCAGATGTCg   >  2:1349376/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
CGGTAGCGTATATTCCTTATACAAACCATCATTCATTTCAATGATTGTTATTGAATTATTTATTGTTGTGAATAAAAAGACATTATGAATATTGGTTTGACTTTGCATATCAGGTTTTTTATTACTCGCTGTAATGTACGAGCCTGTCGTGAATAACGTCGAGAACCCATCCGTTGCGTTTGTGATTATTTTGTTGACTAAACAGACACCCGTTTCTCTGAAGTAAAATCCCAGACTAAATCATCACATAACCATGACATTTTTCTGATATTCCCCGGTAACGCCAGATGTCGA  >  CP009273/1521860‑1522153

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑