| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 1,542,503 | G→T | T282T (ACG→ACT) | fdnG → | formate dehydrogenase‑N, alpha subunit, nitrate‑inducible |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,542,503 | 0 | G | T | 99.5% | 678.4 / NA | 207 | T282T (ACG→ACT) | fdnG | formate dehydrogenase‑N, alpha subunit, nitrate‑inducible |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base T (111/95); minor base A (1/0); total (112/95) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 208 total aligned reads displayed.
TGCTGAAGCGCATCCCGTCGGTTTCCGCTGGGCGATGGAAGCGAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACGTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGACGGTCTGTTCAGCGGCTACGACGCTGAAAAACG > CP009273/1542356‑1542649 | ctgAAGCGCATCCCGTCGGTTTCCGCTGGGCGATGGAAGCGAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTcc > 2:1258932/1‑150 (MQ=255) tgAAGCGCATCCCGTCGGTTTCCGCTGGGCGATGGAAGCGAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCt > 1:2956402/1‑150 (MQ=255) aGCGCATCCCGTCGGTTTCCGCTGGGCGATGGAAGCGAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTc < 1:2232659/150‑1 (MQ=255) gcgcATCCCGTCGGTTTCCGCTGGGCGATGGAAGCGAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCt < 2:1107454/150‑1 (MQ=255) gcATCCCGTCGGTTTCCGCTGGGCGATGGAAGCGAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTgg < 1:2177893/150‑1 (MQ=255) cATCCCGTCGGTTTCCGCTGGGCGATGGAAGCGAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGc < 1:1244302/150‑1 (MQ=255) cATCCCGTCGGTTTCCGCTGGGCGATGGAAGCGAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGc > 1:2821640/1‑150 (MQ=255) aTCCCGTCGGTTTCCGCTGGGCGATGGAAGCGAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCg > 1:160718/1‑150 (MQ=255) cccGTCGGTTTCCGCTGGGCGATGGAAGCGAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGtt > 1:40379/1‑150 (MQ=255) cGTCGGTTTCCGCTGGGCGATGGAAGCGAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGtttt > 2:3466832/1‑150 (MQ=255) cGTCGGTTTCCGCTGGGCGATGGAAGCGAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGtttt < 2:259930/150‑1 (MQ=255) gTCGGTTTCCGCTGGGCGATGGAAGCGAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTg < 1:2342516/150‑1 (MQ=255) ttCCGCTGGGCGATGGAAGCGAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTAc > 1:513992/1‑150 (MQ=255) cGCTGGGCGATGGAAGCGAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTg < 2:371120/150‑1 (MQ=255) cTGGGCGATGGAAGCGAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGAt > 1:665235/1‑150 (MQ=255) cTGGGCGATGGAAGCGAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGAt < 1:469149/150‑1 (MQ=255) tGGGCGATGGAAGCGAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATc > 1:3014690/1‑150 (MQ=255) tGGGCGATGGAAGCGAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATc > 2:586532/1‑150 (MQ=255) cGATGGAAGCGAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGaaa < 2:942034/150‑1 (MQ=255) gATGGAAGCGAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGaaaa > 2:2102393/1‑150 (MQ=255) aTGGAAGCGAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAaac < 2:1991584/150‑1 (MQ=255) aTGGAAGCGAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAaac < 2:2501011/150‑1 (MQ=255) aGCGAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAAcaacaa > 1:1548129/1‑150 (MQ=255) cGAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACaaaa > 1:334708/1‑150 (MQ=255) gAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAAt > 1:2104925/1‑150 (MQ=255) gAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAAt < 1:3054919/150‑1 (MQ=255) aaaCAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCaa > 1:2291983/1‑150 (MQ=255) aacaacaacGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAAc < 2:1077577/150‑1 (MQ=255) acaacaacGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACg < 2:520971/150‑1 (MQ=255) caacaacGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGc > 1:437726/1‑150 (MQ=255) cgacgCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATa > 2:2956631/1‑150 (MQ=255) cgacgCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATa < 1:2303525/150‑1 (MQ=255) acgCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATAc < 1:2000639/149‑1 (MQ=255) acgCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACg < 2:2168469/150‑1 (MQ=255) cgCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGt > 2:3488628/1‑150 (MQ=255) gCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGtt < 2:176983/150‑1 (MQ=255) cAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTa < 2:2013628/150‑1 (MQ=255) aaCCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTaa > 1:1782944/1‑150 (MQ=255) aaCCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTaa > 1:2892024/1‑150 (MQ=255) ttGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCAt < 2:1897310/150‑1 (MQ=255) gATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTa > 2:2946680/1‑150 (MQ=255) gATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTa > 2:2398315/1‑150 (MQ=255) aTCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTac > 1:2250466/1‑150 (MQ=255) aTCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTac > 1:944147/1‑150 (MQ=255) gTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACAcc > 1:1175989/1‑150 (MQ=255) ttGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCa < 2:3552460/150‑1 (MQ=255) tGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCaa > 2:3649108/1‑150 (MQ=255) tGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCaa < 2:273996/150‑1 (MQ=255) tGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCaa > 2:2130432/1‑150 (MQ=255) tGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCaa > 2:2314832/1‑150 (MQ=255) ccccGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGc > 2:2726227/1‑150 (MQ=255) ccGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCct < 2:106422/150‑1 (MQ=255) gTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCctgc < 2:3049582/150‑1 (MQ=255) ttttACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCctgct > 2:1388005/1‑150 (MQ=255) cgcgTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGc > 1:1953535/1‑150 (MQ=255) cgcgTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGc > 1:3084087/1‑150 (MQ=255) cgTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCTGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACTCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGt > 1:1963938/1‑150 (MQ=255) tACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGtga < 2:1550743/150‑1 (MQ=255) cGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGtgatga > 1:2879057/1‑150 (MQ=255) cGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGtgatga < 2:3230026/150‑1 (MQ=255) cTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGAtt > 2:725268/1‑150 (MQ=255) tCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGAtttt > 2:2628460/1‑150 (MQ=255) tgtgGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGc > 1:1040603/1‑150 (MQ=255) tgGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCAACCTGATCGAAAACAACAAAATCAACGCCGAATACGAAAAGCAATACACCAACGCCAGCCTGCTGGAGCGAGATGAttttacaa > 1:875393/1‑146 (MQ=255) ggCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCttt < 1:1468316/150‑1 (MQ=255) ggCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCttt < 1:3365362/150‑1 (MQ=255) cGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCg < 1:1165763/150‑1 (MQ=255) tgATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGa > 2:2152339/2‑150 (MQ=255) gATATTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGaa < 2:40379/150‑1 (MQ=255) tatTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGa > 1:185142/1‑150 (MQ=255) tatTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGa > 2:4426/1‑150 (MQ=255) atTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGAc > 1:1799900/1‑150 (MQ=255) atTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGAc > 1:3693748/1‑150 (MQ=255) atTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGAc > 2:3078981/1‑150 (MQ=255) atTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGAc > 2:2360108/1‑150 (MQ=255) atTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGAc > 2:1431677/1‑150 (MQ=255) anTTACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGAc > 1:1065899/1‑150 (MQ=255) tACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGACGGt < 1:3116870/150‑1 (MQ=255) tACGCGCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGACGGt > 2:1324392/1‑150 (MQ=255) cgcgCCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGACGGTCt < 1:2726538/150‑1 (MQ=255) gcCTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGACGGTCTGtt < 1:1333355/150‑1 (MQ=255) ccTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGACGGTCTGTTc < 2:1582384/150‑1 (MQ=255) ccTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGACGGTCTGTTc > 1:3730302/1‑150 (MQ=255) cTATTCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGACGGTCTGTTCa > 1:534074/1‑150 (MQ=255) tCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGACGGTCTGTTCAGCgg < 1:2551877/150‑1 (MQ=255) tCGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGACGGTCTGTTCAGCgg > 2:286188/1‑150 (MQ=255) cGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGACGGTCTGTTCAGCGGc < 2:2611057/150‑1 (MQ=255) cGTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGACGGTCTGTTCAGCGGc > 1:1554683/1‑150 (MQ=255) gTTCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGACGGTCTGTTCAGCGGCt < 2:665235/150‑1 (MQ=255) ttCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGACGGTCTGTTCAGCGGCTa < 2:2759066/150‑1 (MQ=255) ttCCGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGACGGTCTGTTCAGCGGCTa < 2:3160275/150‑1 (MQ=255) cGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGACGGTCTGTTCAGCGGCTacga < 2:1102836/150‑1 (MQ=255) cGGTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGACGGTCTGTTCAGCGGCTacga < 2:2108270/150‑1 (MQ=255) ggTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGACGGTCTGTTCAGCGGCTacgac > 1:566279/1‑150 (MQ=255) ggTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGACGGTCTGTTCAGCGGCTacgac > 1:3431654/1‑150 (MQ=255) ggTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGACGGTCTGTTCAGCGGCTacgac < 2:2853419/150‑1 (MQ=255) gTACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGACGGTCTGTTCAGCGGCTacgacg < 1:1258932/150‑1 (MQ=255) tACGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGACGGTCTGTTCAGCGGCTACGACGc > 1:3207648/1‑150 (MQ=255) aCGGACATTACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGACGGTCTGTTCAGCGGCTACGACGCt < 2:334820/150‑1 (MQ=255) ttACTTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGACGGTCTGTTCAGCGGCTACGACGCTGAAAAAc < 2:1040603/150‑1 (MQ=255) | TGCTGAAGCGCATCCCGTCGGTTTCCGCTGGGCGATGGAAGCGAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACGTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGACGGTCTGTTCAGCGGCTACGACGCTGAAAAACG > CP009273/1542356‑1542649 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |