Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009273 1,551,828 T→A A156A (GCA→GCT)  ddpF ← D,D‑dipeptide permease system, ATP‑binding component

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092731,551,8280TA100.0% 693.1 / NA 206A156A (GCA→GCT) ddpFD,D‑dipeptide permease system, ATP‑binding component
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (103/103);  total (103/103)

Only 100 of 214 total aligned reads displayed.

CACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGTGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCAACGCTCGCCGCTGTTGTTCACTACTACGCTTAGCTATCCA  >  CP009273/1551681‑1551974
                                                                                                                                                   |                                                                                                                                                  
cACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGc                                                                                                                                                  <  1:3435465/150‑1 (MQ=255)
   cGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGctct                                                                                                                                               >  1:817749/1‑150 (MQ=255)
   cGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGctca                                                                                                                                               <  1:430531/150‑2 (MQ=255)
   cGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACAGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGctct                                                                                                                                               <  2:3057527/150‑1 (MQ=255)
    gagaCATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTg                                                                                                                                              <  2:1242937/150‑1 (MQ=255)
     agaCATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTgg                                                                                                                                             >  1:10760/1‑150 (MQ=255)
     agaCATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTgg                                                                                                                                             >  1:2612345/1‑150 (MQ=255)
       aCATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCa                                                                                                                                           >  2:115992/1‑150 (MQ=255)
        cATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCaa                                                                                                                                          >  1:1299290/1‑150 (MQ=255)
         aTTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAAt                                                                                                                                         <  1:2182131/150‑1 (MQ=255)
         aTTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAAt                                                                                                                                         <  2:3402303/150‑1 (MQ=255)
          ttGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATg                                                                                                                                        <  2:208770/150‑1 (MQ=255)
           tgtgtgAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATgg                                                                                                                                       >  2:3750434/1‑150 (MQ=255)
            gtgtgAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGc                                                                                                                                      <  2:2468965/150‑1 (MQ=255)
             tgtgAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCg                                                                                                                                     >  1:2582915/1‑150 (MQ=255)
               tgAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGAt                                                                                                                                   <  1:1486174/150‑1 (MQ=255)
                gAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATa                                                                                                                                  <  1:3377308/150‑1 (MQ=255)
                 aaaTCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATAc                                                                                                                                 >  1:270155/1‑150 (MQ=255)
                   aTCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGt                                                                                                                               >  2:872882/1‑150 (MQ=255)
                     cAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTg                                                                                                                             <  1:1387127/150‑1 (MQ=255)
                        cacaTAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTACATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCg                                                                                                                          >  1:3718916/1‑150 (MQ=255)
                            tAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGc                                                                                                                      >  1:1340169/1‑150 (MQ=255)
                            tAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGc                                                                                                                      <  1:3102151/150‑1 (MQ=255)
                               gTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCccg                                                                                                                   <  1:780554/150‑1 (MQ=255)
                                 cAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCccgcc                                                                                                                 >  1:591443/1‑150 (MQ=255)
                                  aGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCccgccg                                                                                                                <  1:2471961/150‑1 (MQ=255)
                                  aGCCCGTGATTTTCATGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCccgccg                                                                                                                <  2:3538275/150‑1 (MQ=255)
                                   gCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCgg                                                                                                               <  2:3350500/150‑1 (MQ=255)
                                     ccGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGgag                                                                                                             >  1:1961497/1‑150 (MQ=255)
                                     ccGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGgag                                                                                                             >  1:966886/1‑150 (MQ=255)
                                      cGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGgaga                                                                                                            >  1:180114/1‑150 (MQ=255)
                                       gTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGaa                                                                                                           <  2:3510860/150‑1 (MQ=255)
                                       gTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGaa                                                                                                           >  2:524438/1‑150 (MQ=255)
                                                 tGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGaggc                                                                                                 >  1:293168/1‑150 (MQ=255)
                                                  gTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGaggca                                                                                                <  1:1275124/150‑1 (MQ=255)
                                                  gTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGaggca                                                                                                <  1:1603266/150‑1 (MQ=255)
                                                    aGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGaggcagg                                                                                              <  2:959951/150‑1 (MQ=255)
                                                    aGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGaggcagg                                                                                              <  1:2677903/150‑1 (MQ=255)
                                                      cGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCg                                                                                            <  1:2557203/150‑1 (MQ=255)
                                                        ttACCAGTTAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGt                                                                                          <  2:183950/150‑1 (MQ=255)
                                                           ccAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCga                                                                                       <  2:671273/150‑1 (MQ=255)
                                                             aGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCgaga                                                                                     <  2:3109183/150‑1 (MQ=255)
                                                             aGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCgaga                                                                                     >  2:847144/1‑150 (MQ=255)
                                                             aGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCgaga                                                                                     <  2:566122/150‑1 (MQ=255)
                                                                 aaTTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACt                                                                                 >  2:3699017/1‑150 (MQ=255)
                                                                 aaTTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACt                                                                                 <  2:454516/150‑1 (MQ=255)
                                                                   ttGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTcc                                                                               <  2:654183/150‑1 (MQ=255)
                                                                      aGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGa                                                                            >  1:353206/1‑150 (MQ=255)
                                                                      aGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGa                                                                            >  1:353830/1‑150 (MQ=255)
                                                                        gATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACg                                                                          <  1:2908599/150‑1 (MQ=255)
                                                                        gATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACg                                                                          <  2:318821/150‑1 (MQ=255)
                                                                         aTCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGa                                                                         <  1:1895782/150‑1 (MQ=255)
                                                                           cTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAAt                                                                       >  2:2531673/1‑150 (MQ=255)
                                                                                ccTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCa                                                                  <  2:261859/150‑1 (MQ=255)
                                                                                  tGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCAcc                                                                <  2:326255/150‑1 (MQ=255)
                                                                                  tGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCAcc                                                                >  2:1535351/1‑150 (MQ=255)
                                                                                   gAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCt                                                               >  1:3289699/1‑150 (MQ=255)
                                                                                    aaCGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTg                                                              >  2:1587542/1‑150 (MQ=255)
                                                                                      cGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGca                                                            >  1:3081335/1‑150 (MQ=255)
                                                                                        gagaTATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGcaca                                                          <  1:582617/150‑1 (MQ=255)
                                                                                         agaTATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAg                                                         <  2:822668/150‑1 (MQ=255)
                                                                                         agaTATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAg                                                         >  2:1274277/1‑150 (MQ=255)
                                                                                           atatCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGcc                                                       >  2:1559605/1‑150 (MQ=255)
                                                                                             atCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCaa                                                     >  2:2313670/1‑150 (MQ=255)
                                                                                              tCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAAc                                                    >  2:2702906/1‑150 (MQ=255)
                                                                                               ccAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGACTACCCACCTGCACAGCCAAct                                                   >  2:3686921/1‑150 (MQ=255)
                                                                                                   cgcAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAActcctc                                               >  1:3645133/1‑150 (MQ=255)
                                                                                                    gcAGAGGTTGGCTCATCAAGCACCATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAAGGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCctct                                              <  2:3366965/150‑1 (MQ=255)
                                                                                                    gcAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCctct                                              >  2:1825238/1‑150 (MQ=255)
                                                                                                     cAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTg                                             >  2:223540/1‑150 (MQ=255)
                                                                                                      agagGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGc                                            >  1:1556250/1‑150 (MQ=255)
                                                                                                      agagGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGc                                            >  1:10089/1‑150 (MQ=255)
                                                                                                        agGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCa                                          >  2:2956399/1‑150 (MQ=255)
                                                                                                         ggTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCaa                                         >  1:404506/1‑150 (MQ=255)
                                                                                                         ggTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCaa                                         <  2:636687/150‑1 (MQ=255)
                                                                                                          gTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCAAc                                        >  1:624569/1‑150 (MQ=255)
                                                                                                           ttGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCAACg                                       <  2:2990129/150‑1 (MQ=255)
                                                                                                            tGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCAACGc                                      >  2:1318817/1‑150 (MQ=255)
                                                                                                               cTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCAACGCTcg                                   >  1:735321/1‑150 (MQ=255)
                                                                                                                  atcaAGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCAACGCTcgccg                                <  1:2726274/150‑1 (MQ=255)
                                                                                                                      aGCACAATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCAACGCTCGCCGCtgt                            >  2:1673056/1‑150 (MQ=255)
                                                                                                                         acaATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCAACGCTCGCCGCtgttgt                         <  2:896706/150‑1 (MQ=255)
                                                                                                                         acaATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCAACGCTCGCCGCtgttgt                         <  2:2800332/150‑1 (MQ=255)
                                                                                                                         acaATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCAACGCTCGCCGCtgttgt                         <  1:942541/150‑1 (MQ=255)
                                                                                                                         acaATCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCAACGCTCGCCGCtgttgt                         >  1:3114595/1‑150 (MQ=255)
                                                                                                                           aaTCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCAACGCTCGCCGCTGTTGTTc                       <  2:1961497/150‑1 (MQ=255)
                                                                                                                           aaTCACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCAACGCTCGCCGCTGTTGTTc                       <  1:2663924/150‑1 (MQ=255)
                                                                                                                              cACGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCAACGCTCGCCGCTGTTGTTCact                    >  1:3328946/1‑150 (MQ=255)
                                                                                                                               aCGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCAACGCTCGCCGCTGTTGTTCacta                   <  2:2612345/150‑1 (MQ=255)
                                                                                                                                cGTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCAACGCTCGCCGCTGTTGTTCactac                  >  1:3507590/1‑150 (MQ=255)
                                                                                                                                 gTCAGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCAACGCTCGCCGCTGTTGTTCactact                 >  1:2407835/1‑150 (MQ=255)
                                                                                                                                    aGGCTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCAACGCTCGCCGCTGTTGTTCACTACTACg              <  1:529572/150‑1 (MQ=255)
                                                                                                                                       cTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCAACGCTCGCCGCTGTTGTTCACTACTACGCtt           <  2:3615785/150‑1 (MQ=255)
                                                                                                                                       cTGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCAACGCTCGCCGCTGTTGTTCACTACTACGCtt           <  2:3081335/150‑1 (MQ=255)
                                                                                                                                        tGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCAACGCTCGCCGCTGTTGTTCACTACTACGCTTa          <  1:847144/150‑1 (MQ=255)
                                                                                                                                        tGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCAACGCTCGCCGCTGTTGTTCACTACTACGCTTa          <  1:3021520/150‑1 (MQ=255)
                                                                                                                                        tGCGAAGAGAGAGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCAACGCTCGCCGCTGTTGTTCACTACTACGCTTa          <  1:1150862/150‑1 (MQ=255)
                                                                                                                                             agagagagCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCAACGCTCGCCGCTGTTGTTCACTACTACGCTTAGCTAt     >  2:3092643/1‑150 (MQ=255)
                                                                                                                                               agagagCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCAACGCTCGCCGCTGTTGTTCACTACTACGCTTAGCTATcc   <  1:547944/150‑1 (MQ=255)
                                                                                                                                                gagaGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCAACGCTCGCCGCTGTTGTTCACTACTACGCTTAGCTATCCa  >  1:751958/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
CACCGAGACATTGTGTGAAATCAGCACATAGGTCAGCCCGTGATTTTCCTGTAGCGTTACCAGTAAATTGAGGATCTGCGCCTGAACGGAGATATCCAGCGCAGAGGTTGGCTCATCAAGCACAATCACGTCAGGCTGCGAAGAGAGTGCTCTGGCAATGGCGATACGTTGCCGCTGCCCGCCGGAGAACGCATGAGGCAGGCGGTCGAGATACTCCGGACGAATACCCACCTGCACAGCCAACTCCTCTGCCAACGCTCGCCGCTGTTGTTCACTACTACGCTTAGCTATCCA  >  CP009273/1551681‑1551974

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑