BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009273	1,631,894	C→T	S49N (AGC→AAC)	gnsB ←	Qin prophage; multicopy suppressor of secG(Cs) and fabA6(Ts)

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	1,631,894	0	C	T	100.0%	791.4 / NA	235	S49N (AGC→AAC)	gnsB	Qin prophage; multicopy suppressor of secG(Cs) and fabA6(Ts)
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (119/116); total (119/116)

Only 100 of 238 total aligned reads displayed.

CGGACTGCATTGGTTTAATAAAAACCATCAACAATTGTGATTTAGATATTCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGCTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATATCTGCTTCTGCTTTTGTTTTTAAGTTTTCAATATTCATC  >  CP009273/1631747‑1632040

cGGACTGCATTGGTTTAATAAAAACCATCAACAATTGTGATTTAGATATTCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGttt                                                                                                                                                  <  2:2273250/150‑1 (MQ=255)

 ggACTGCATTGGTTTAATAAAAACCATCAACAATTGTGATTTAGATATTCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGtttt                                                                                                                                                 >  1:346035/1‑150 (MQ=255)

       cATTGGTTTAATAAAAACCATCAACAATTGTGATTTAGATATTCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGAc                                                                                                                                           >  1:280426/1‑150 (MQ=255)

        aTTGGTTTAATAAAAACCATCAACAATTGTGATTTAGATATTCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGAcc                                                                                                                                          >  1:3585802/1‑150 (MQ=255)

          tGGTTTAATAAAAACCATCAACAATTGTGATTTAGATATTCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCg                                                                                                                                        <  2:216161/150‑1 (MQ=255)

          tGGTTTAATAAAAACCATCAACAATTGTGATTTAGATATTCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCg                                                                                                                                        >  2:3325093/1‑150 (MQ=255)

            gTTTAATAAAAACCATCAACAATTGTGATTTAGATATTCGGAACCATTCAAATATAACACAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTc                                                                                                                                      <  2:706890/150‑1 (MQ=255)

              ttAATAAAAACCATCAACAATTGTGATTTAGATATTCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCAt                                                                                                                                    >  2:3590048/1‑150 (MQ=255)

               taataaAAACCATCAACAATTGTGATTTAGATATTCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCAtt                                                                                                                                   >  1:1393079/1‑150 (MQ=255)

                aataaAAACCATCAACAATTGTGATTTAGATATTCGGAACCATTCAAATATAACAAAACCCCGTAAAAAAGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCAttt                                                                                                                                  >  2:3569570/1‑150 (MQ=255)

                 ataaAAACCATCAACAATTGTGATTTAGATATTCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCAtttt                                                                                                                                 >  2:2453875/1‑150 (MQ=255)

                   aaaaaCCATCAACAATTGTGATTTAGATATTCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCAtttttt                                                                                                                               >  2:2754263/1‑150 (MQ=255)

                    aaaaCCATCAACAATTGTGATTTAGATATTCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTc                                                                                                                              >  2:3685534/1‑150 (MQ=255)

                      aaCCATCAACAATTGTGATTTAGATATTCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTccc                                                                                                                            <  2:1523737/150‑1 (MQ=255)

                        ccATCAACAATTGTGATTTAGATATTCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGt                                                                                                                          <  1:3517193/150‑1 (MQ=255)

                          aTCAACAATTGTGATTTAGATATTCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGc                                                                                                                        <  2:3728563/150‑1 (MQ=255)

                             aacaaTTGTGATTTAGATATTCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGt                                                                                                                     >  1:1042540/1‑150 (MQ=255)

                             aacaaTTGTGATTTAGATATTCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGt                                                                                                                     >  2:796693/1‑150 (MQ=255)

                                aaTTGTGATTTAGATATTCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTaaa                                                                                                                  <  1:2956390/150‑1 (MQ=255)

                                aaTTGTGATTTAGATATTCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTaaa                                                                                                                  <  1:2434208/150‑1 (MQ=255)

                                  ttGTGATTTAGATATTCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACt                                                                                                                <  1:1624897/150‑1 (MQ=255)

                                     tgATTTAGATATTCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGaa                                                                                                             >  1:561865/1‑150 (MQ=255)

                                      gATTTAGATATTCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAAt                                                                                                            <  1:1259601/150‑1 (MQ=255)

                                       aTTTAGATATTCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATa                                                                                                           >  1:1851487/1‑150 (MQ=255)

                                       aTTTAGATATTCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATa                                                                                                           <  1:2325388/150‑1 (MQ=255)

                                                ttCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAAct                                                                                                  <  1:3101151/150‑1 (MQ=255)

                                                 tCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAActt                                                                                                 <  2:3532916/150‑1 (MQ=255)

                                                 tCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAActt                                                                                                 >  2:481480/1‑150 (MQ=255)

                                                 tCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAActt                                                                                                 <  2:750601/150‑1 (MQ=255)

                                                    gAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAActtctt                                                                                              >  2:2092100/1‑150 (MQ=255)

                                                    gAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAActtctt                                                                                              >  2:3129586/1‑150 (MQ=255)

                                                    gAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAActtctt                                                                                              >  2:3063819/1‑150 (MQ=255)

                                                     aaCCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCttt                                                                                             <  1:1922484/150‑1 (MQ=255)

                                                      aCCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTc                                                                                            >  1:1002574/1‑150 (MQ=255)

                                                      aCCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTc                                                                                            >  2:675989/1‑150 (MQ=255)

                                                      aCCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTc                                                                                            >  1:2903666/1‑150 (MQ=255)

                                                        cATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTccc                                                                                          <  2:588871/150‑1 (MQ=255)

                                                             aaaTATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCt                                                                                     <  2:1200966/150‑1 (MQ=255)

                                                              aaTATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCtt                                                                                    <  2:2638637/150‑1 (MQ=255)

                                                              aaTATAAAAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCtt                                                                                    <  1:2731455/150‑1 (MQ=255)

                                                              aaTATAAAAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCtt                                                                                    <  1:733869/150‑1 (MQ=255)

                                                               atatAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCttt                                                                                   >  1:1474379/1‑150 (MQ=255)

                                                                tataACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCtttt                                                                                  >  1:1772219/1‑150 (MQ=255)

                                                                  taACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTc                                                                                <  2:2064797/150‑1 (MQ=255)

                                                                  taACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTc                                                                                >  1:229809/1‑150 (MQ=255)

                                                                      aaaaCCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTaa                                                                            <  2:3292782/150‑1 (MQ=255)

                                                                         aCCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGtt                                                                         <  2:1118233/150‑1 (MQ=255)

                                                                         aCCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGtt                                                                         <  1:146919/150‑1 (MQ=255)

                                                                          ccccGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTc                                                                        <  1:3098098/150‑1 (MQ=255)

                                                                           cccGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCa                                                                       >  2:2378490/1‑150 (MQ=255)

                                                                            ccGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTAAATACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTACCGGTCTTTTTCTTAAGTTCaa                                                                      >  2:1388893/1‑150 (MQ=255)

                                                                              gTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCaata                                                                    >  1:2412378/1‑150 (MQ=255)

                                                                              gTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCaata                                                                    <  2:3352910/150‑1 (MQ=255)

                                                                              gTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAAATTCTTTCCCGGTCTTTTTCTTAAGTTCaata                                                                    >  1:1685919/1‑150 (MQ=255)

                                                                                aaaaaCGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCaataat                                                                  >  1:2081003/1‑150 (MQ=255)

                                                                                aaaaaCGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCaataat                                                                  >  2:204974/1‑150 (MQ=255)

                                                                                 aaaaCGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAAtt                                                                 >  2:2785919/1‑150 (MQ=255)

                                                                                  aaaCGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAAttt                                                                <  1:2199156/150‑1 (MQ=255)

                                                                                        ggTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTCACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTg                                                          >  1:1180154/1‑150 (MQ=255)

                                                                                         gTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGt                                                         >  1:3696033/1‑150 (MQ=255)

                                                                                          tttATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGtt                                                        >  2:3789148/1‑150 (MQ=255)

                                                                                            tATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTtat                                                      <  1:1219471/150‑1 (MQ=255)

                                                                                                gATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTatatat                                                  >  1:2893394/1‑150 (MQ=255)

                                                                                                  tAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTc                                                <  1:2637781/150‑1 (MQ=255)

                                                                                                    aaTTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAg                                              <  2:3383278/150‑1 (MQ=255)

                                                                                                      ttttATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGaa                                            <  2:440192/150‑1 (MQ=255)

                                                                                                       tttATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGaaa                                           >  1:1112928/1‑150 (MQ=255)

                                                                                                          attattGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAatat                                        <  1:993608/150‑1 (MQ=255)

                                                                                                            tattGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATAtct                                      >  2:3488461/1‑150 (MQ=255)

                                                                                                            tattGAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTATTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATAtct                                      >  1:1395981/1‑150 (MQ=255)

                                                                                                                gAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATAtctgctt                                  >  2:1826148/1‑150 (MQ=255)

                                                                                                                gAATACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATAtctgctt                                  <  2:2562933/150‑1 (MQ=255)

                                                                                                                  aTACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATAtctgcttct                                >  2:2193589/1‑150 (MQ=255)

                                                                                                                   tACATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATAtctgcttctg                               <  2:951598/150‑1 (MQ=255)

                                                                                                                     cATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATAtctgcttctgct                             <  2:2942831/150‑1 (MQ=255)

                                                                                                                     cATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATAtctgcttctgct                             >  1:410300/1‑150 (MQ=255)

                                                                                                                     cATCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTAAATAATTTTTTTTGTTATATATTCAGAAATAtctgcttctgct                             >  1:409684/1‑150 (MQ=255)

                                                                                                                      aTCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATATctgcttctgctt                            <  2:151384/150‑1 (MQ=255)

                                                                                                                      aTCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATATctgcttctgctt                            <  1:996071/150‑1 (MQ=255)

                                                                                                                       tCAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATATCTGCTTCTGCttt                           >  2:1451610/1‑150 (MQ=255)

                                                                                                                        cAGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATATCTGCTTCTGCtttt                          <  1:3361436/150‑1 (MQ=255)

                                                                                                                         aGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATATCTGCTTCTGCTTTTg                         >  2:1695435/1‑150 (MQ=255)

                                                                                                                         aGATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATATCTGCTTCTGCTTTTg                         >  2:1364883/1‑150 (MQ=255)

                                                                                                                          gATTAAATTAATCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAAGTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATATCTGCTTCTGCTTTTGt                        >  1:3389126/1‑150 (MQ=255)

                                                                                                                           attaaattaaTCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATATCTGCTTCTGCTTTTGtt                       >  2:2901032/1‑150 (MQ=255)

                                                                                                                              aaattaaTCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATATCTGCTTCTGCTTTTGttttt                    <  2:1473104/150‑1 (MQ=255)

                                                                                                                               aattaaTCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATATCTGCTTCTGCTTTTGTTTTTa                   >  2:784355/1‑150 (MQ=255)

                                                                                                                                attaaTCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATATCTGCTTCTGCTTTTGTTTTTaa                  >  2:1747350/1‑150 (MQ=255)

                                                                                                                                attaaTCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATATCTGCTTCTGCTTTTGTTTTTaa                  <  2:323987/150‑1 (MQ=255)

                                                                                                                                 ttaaTCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATATCTGCTTCTGCTTTTGTTTTTAAg                 <  1:229094/150‑1 (MQ=255)

                                                                                                                                 ttaaTCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATATCTGCTTCTGCTTTTGTTTTTAAg                 <  1:3180256/150‑1 (MQ=255)

                                                                                                                                   aaTCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATATCTGCTTCTGCTTTTGTTTTTAAGtt               <  1:2088821/150‑1 (MQ=255)

                                                                                                                                   aaTCTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACATCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATATCTGCTTCTGCTTTTTTTTTTAAGtt               >  1:1512730/1‑150 (MQ=255)

                                                                                                                                      cTTGACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATATCTGCTTCTGCTTTTGTTTTTAAGTTTTc            <  2:2412378/150‑1 (MQ=255)

                                                                                                                                         gACATCATAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATATCTGCTTCTGCTTTTGTTTTTAAGTTTTCAat         <  1:3202962/150‑1 (MQ=255)

                                                                                                                                           catcatAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATATCTGCTTCTGCTTTTGTTTTTAAGTTTTCAatat       <  1:965755/150‑1 (MQ=255)

                                                                                                                                              catAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATATCTGCTTCTGCTTTTGTTTTTAAGTTTTCAATATtca    <  1:3192769/150‑1 (MQ=255)

                                                                                                                                              catAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATATCTGCTTCTGCTTTTGTTTTTAAGTTTTCAATATtca    >  2:3454644/1‑150 (MQ=255)

                                                                                                                                                tAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATATCTGCTTCTGCTTTTGTTTTTAAGTTTTCAATATtcatc  >  2:937557/1‑150 (MQ=255)

                                                                                                                                                tAGTTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATATCTGCTTCTGCTTTTGTTTTTAAGTTTTCAATATtcatc  >  2:2884195/1‑150 (MQ=255)

CGGACTGCATTGGTTTAATAAAAACCATCAACAATTGTGATTTAGATATTCGGAACCATTCAAATATAACAAAACCCCGTAAAAACGAGGTTTATGGATAAATTTTATTATTGAATACATCAGATTAAATTAATCTTGACATCATAGCTTTCAAGACCCGTCATTTTTTCCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATATCTGCTTCTGCTTTTGTTTTTAAGTTTTCAATATTCATC  >  CP009273/1631747‑1632040

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`