BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009273	1,642,135	C→T	intergenic (‑28/‑56)	dicC ← / → dicA	Qin prophage; DNA‑binding transcriptional regulator for DicB/Qin prophage; putative regulator for DicB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	1,642,135	0	C	T	100.0%	721.2 / NA	214	intergenic (‑28/‑56)	dicC/dicA	Qin prophage; DNA‑binding transcriptional regulator for DicB/Qin prophage; putative regulator for DicB
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (107/107); total (107/107)

Only 100 of 220 total aligned reads displayed.

CGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAACTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTATCGTCGGAAAAACCTCAAACACACCCAAAGGTCTCTTGCTAAAGCCCTGA  >  CP009273/1641988‑1642281

cgcgcgACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCAtaatta                                                                                                                                                  >  2:2235267/1‑150 (MQ=255)

 gcgcgACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCAtaattaa                                                                                                                                                 <  2:1674043/150‑1 (MQ=255)

   gcgACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACa                                                                                                                                               <  1:183056/150‑1 (MQ=255)

    cgACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACaa                                                                                                                                              <  1:1574759/150‑1 (MQ=255)

    cgACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACaa                                                                                                                                              >  1:956643/1‑150 (MQ=255)

     gACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAag                                                                                                                                             >  1:3634461/1‑150 (MQ=255)

       ccTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAagat                                                                                                                                           <  2:2321018/150‑1 (MQ=255)

        cTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAagata                                                                                                                                          <  1:1408951/150‑1 (MQ=255)

          tCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAagataga                                                                                                                                        <  1:2640498/150‑1 (MQ=255)

          tCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAagataga                                                                                                                                        >  1:47157/1‑150 (MQ=255)

          tCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAagataga                                                                                                                                        >  2:1226116/1‑150 (MQ=255)

           cGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAagatagat                                                                                                                                       <  2:32977/150‑1 (MQ=255)

           cGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAagatagat                                                                                                                                       <  2:3206771/150‑1 (MQ=255)

              gAACTAAATCCCCTTTCCAGCTATAAAGTGAAGACAAAATAATACCTGCGGCTTGTGCAAGTTTTGTTTTTTAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAAAACCTTTATTGTTAGTCATAATTAACAAGATAGATGtt                                                                                                                                    <  1:2543270/150‑1 (MQ=255)

              gAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGtt                                                                                                                                    <  1:2855222/150‑1 (MQ=255)

               aaCTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTa                                                                                                                                   >  2:1174179/1‑150 (MQ=255)

               aaCTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTa                                                                                                                                   <  2:593302/150‑1 (MQ=255)

               aaCTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTa                                                                                                                                   <  1:2148643/150‑1 (MQ=255)

               aaCTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTa                                                                                                                                   >  2:3447957/1‑150 (MQ=255)

                   acaTCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACaa                                                                                                                               >  1:3687788/3‑150 (MQ=255)

                   aaaTCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACaa                                                                                                                               <  2:705/150‑1 (MQ=255)

                   aaaTCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACaa                                                                                                                               >  1:140538/1‑150 (MQ=255)

                   aaaTCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACaa                                                                                                                               >  1:3571987/1‑150 (MQ=255)

                     aTCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACaaaa                                                                                                                             >  1:1962074/1‑150 (MQ=255)

                     aTCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACaaaa                                                                                                                             >  2:3573624/1‑150 (MQ=255)

                     aTCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACaaaa                                                                                                                             >  1:1237122/1‑150 (MQ=255)

                         ccTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACAt                                                                                                                         >  1:3313731/1‑150 (MQ=255)

                             tCCAGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTc                                                                                                                     <  1:2760770/150‑1 (MQ=255)

                                aGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAAt                                                                                                                  <  1:3737621/150‑1 (MQ=255)

                                aGCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAAt                                                                                                                  <  1:3576128/150‑1 (MQ=255)

                                 gCTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATa                                                                                                                 >  1:2203600/1‑150 (MQ=255)

                                  cTATAAAGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATAc                                                                                                                <  2:1081976/150‑1 (MQ=255)

                                      aaaGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGAtt                                                                                                            <  2:2028877/150‑1 (MQ=255)

                                        aGCGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTa                                                                                                          <  1:1339977/150‑1 (MQ=255)

                                          cGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGc                                                                                                        >  1:2890587/1‑150 (MQ=255)

                                          cGAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGc                                                                                                        >  2:1812808/1‑150 (MQ=255)

                                           gAAGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCa                                                                                                       >  1:3180029/1‑150 (MQ=255)

                                            aaGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCAt                                                                                                      <  1:2997283/150‑1 (MQ=255)

                                             aGCCAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCAtt                                                                                                     <  1:247773/150‑1 (MQ=255)

                                                cAAACGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGc                                                                                                  <  1:3491757/150‑1 (MQ=255)

                                                 aaaCGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCt                                                                                                 >  1:3176984/1‑150 (MQ=255)

                                                 aaaCGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCt                                                                                                 <  2:2354111/150‑1 (MQ=255)

                                                 aaaCGAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCt                                                                                                 <  1:3580811/150‑1 (MQ=255)

                                                     gAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACt                                                                                             <  2:829943/150‑1 (MQ=255)

                                                     gAATACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACt                                                                                             >  1:1917695/1‑150 (MQ=255)

                                                      aaTACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTa                                                                                            >  1:2211632/1‑150 (MQ=255)

                                                      aaTACCTGCGGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTa                                                                                            <  1:616755/150‑1 (MQ=255)

                                                            tgcggcTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGaaa                                                                                      <  1:2508410/150‑1 (MQ=255)

                                                                gctTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACaaa                                                                                  <  1:3271262/150‑1 (MQ=255)

                                                                gctTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACaaa                                                                                  <  2:1273317/150‑1 (MQ=255)

                                                                    gtgCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAAt                                                                              >  1:1756455/1‑150 (MQ=255)

                                                                    gtgCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAAt                                                                              <  2:245682/150‑1 (MQ=255)

                                                                      gCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAAttt                                                                            >  1:3124969/1‑150 (MQ=255)

                                                                      gCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAAttt                                                                            <  1:1328342/150‑1 (MQ=255)

                                                                       cAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTa                                                                           <  2:1327720/150‑1 (MQ=255)

                                                                           ttttgttttTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTa                                                                       <  2:2493931/150‑1 (MQ=255)

                                                                              tgttttTGAACCGAAAAACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCg                                                                    <  1:773840/150‑1 (MQ=255)

                                                                                 ttttGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCg                                                                 <  1:428144/150‑1 (MQ=255)

                                                                                   ttGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGaa                                                               <  1:3732126/150‑1 (MQ=255)

                                                                                   ttGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGaa                                                               >  1:2327568/1‑150 (MQ=255)

                                                                                    tGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAAc                                                              >  2:1021511/1‑150 (MQ=255)

                                                                                    tGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAAc                                                              >  1:2110470/1‑150 (MQ=255)

                                                                                    tGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAAc                                                              >  1:1231393/1‑150 (MQ=255)

                                                                                     gAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACg                                                             <  2:3443385/150‑1 (MQ=255)

                                                                                      aaCCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGc                                                            >  2:1941917/1‑150 (MQ=255)

                                                                                        ccGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCAt                                                          <  2:3123588/150‑1 (MQ=255)

                                                                                        ccGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCAt                                                          >  2:1042565/1‑150 (MQ=255)

                                                                                         cGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATc                                                         >  1:925649/1‑150 (MQ=255)

                                                                                         cGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATc                                                         >  1:3524582/1‑150 (MQ=255)

                                                                                          gAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCa                                                        <  1:138628/150‑1 (MQ=255)

                                                                                            aaTACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAgg                                                      >  2:3184473/1‑150 (MQ=255)

                                                                                            aaTACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAgg                                                      >  2:2122940/1‑150 (MQ=255)

                                                                                              tACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTa                                                    >  1:653564/1‑150 (MQ=255)

                                                                                              tACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTa                                                    <  1:3090982/150‑1 (MQ=255)

                                                                                               aCAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTAt                                                   >  2:1985510/1‑150 (MQ=255)

                                                                                               aCAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTAt                                                   >  2:148456/1‑150 (MQ=255)

                                                                                                  aaaGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTAtcgt                                                >  1:325186/1‑150 (MQ=255)

                                                                                                    agagCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTAtcgtcg                                              <  1:2972039/150‑1 (MQ=255)

                                                                                                     gagCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTATCGTCgg                                             <  2:2253826/150‑1 (MQ=255)

                                                                                                        cGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTATCGTCGGaaa                                          >  1:2739596/1‑150 (MQ=255)

                                                                                                         gTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAATATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAATAATTGATCTATCGGCGAACGCATCAGGTATCGTCGGaaaa                                         <  2:2819938/150‑1 (MQ=255)

                                                                                                          tCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTATCGTCGGaaaaa                                        <  1:1253582/150‑1 (MQ=255)

                                                                                                                  aaGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTATCGTCGGAAAAACCTCAAac                                >  2:2218957/1‑150 (MQ=255)

                                                                                                                   aGCATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTATCGTCGGAAAAACCTCAAaca                               >  1:1834409/1‑150 (MQ=255)

                                                                                                                     cATTTAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTATCGTCGGAAAAACCTCAAacaca                             <  2:3714181/150‑1 (MQ=255)

                                                                                                                        ttAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTATCGTCGGAAAAACCTCAAACACAccc                          >  2:3599421/1‑150 (MQ=255)

                                                                                                                         tAAAACACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTATCGTCGGAAAAACCTCAAACACACCCa                         >  2:3070430/1‑150 (MQ=255)

                                                                                                                          aaaaCACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTATCGTCGGAAAAACCTCAAACACACCCaa                        >  1:3054747/1‑150 (MQ=255)

                                                                                                                            aaCACCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTATCGTCGGAAAAACCTCAAACACACCCAAAg                      >  1:236914/1‑150 (MQ=255)

                                                                                                                              cacCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTATCGTCGGAAAAACCTCAAACACACCCAAAGGt                    >  2:2959630/1‑150 (MQ=255)

                                                                                                                              cacCTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTATCGTCGGAAAAACCTCAAACACACCCAAAGGt                    >  2:441239/1‑150 (MQ=255)

                                                                                                                                ccTTTATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTATCGTCGGAAAAACCTCAAACACACCCAAAGGtct                  <  2:140538/150‑1 (MQ=255)

                                                                                                                                    tATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTATCGTCGGAAAAACCTCAAACACACCCAAAGGTCTCTTg              <  2:2465896/150‑1 (MQ=255)

                                                                                                                                    tATTGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTATCGTCGGAAAAACCTCAAACACACCCAAAGGTCTCTTg              >  1:1125264/1‑150 (MQ=255)

                                                                                                                                      ttGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTATCGTCGGAAAAACCTCAAACACACCCAAAGGTCTCTTGCt            <  2:2922561/150‑1 (MQ=255)

                                                                                                                                       tGTTAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTATCGTCGGAAAAACCTCAAACACACCCAAAGGTCTCTTGCTa           >  2:3308267/1‑150 (MQ=255)

                                                                                                                                         ttAGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTATCGTCGGAAAAACCTCAAACACACCCAAAGGTCTCTTGCTaaa         >  1:762351/1‑150 (MQ=255)

                                                                                                                                           aGTCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTATCGTCGGAAAAACCTCAAACACACCCAAAGGTCTCTTGCTAAAGc       <  2:325186/150‑1 (MQ=255)

                                                                                                                                             tCATAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTATCGTCGGAAAAACCTCAAACACACCCAAAGGTCTCTTGCTAAAGccc     <  1:1226116/150‑1 (MQ=255)

                                                                                                                                               aTAATTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTATCGTCGGAAAAACCTCAAACACACCCAAAGGTCTCTTGCTAAAGCCCTg   >  2:479013/1‑150 (MQ=255)

CGCGCGACCTTCGGGAACTAAATCCCCTTTCCAGCTATAAAGCGAAGCCAAACGAATACCTGCTGCTTGTGCAAGTTTTGTTTTTGAACCGAAATACAAAAGAGCGTCAGTTTTAAGCATTTAAAACACCTTTATTGTTAGTCATAACTAACAAGATAGATGTTAACAAAAACATAGTCAATACGATTTAGCATTAGCTAACTATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTATCGTCGGAAAAACCTCAAACACACCCAAAGGTCTCTTGCTAAAGCCCTGA  >  CP009273/1641988‑1642281

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`